Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 RNU6-1319P-201ENST00000390855 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-747P-201ENST00000390928 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-241P-201ENST00000391148 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 MIR1257-201ENST00000408490 117 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-1165P-201ENST00000410119 107 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-447P-201ENST00000410293 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-1118P-201ENST00000410382 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-1076P-201ENST00000410397 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-355P-201ENST00000410427 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-791P-201ENST00000410467 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-705P-201ENST00000410601 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU4-43P-201ENST00000410628 137 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-1100P-201ENST00000410691 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-860P-201ENST00000410860 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-602P-201ENST00000411155 105 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-177P-201ENST00000411257 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-1217P-201ENST00000411276 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-785P-201ENST00000411324 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 SNORD127-201ENST00000458892 86 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 snoU13.2-201ENST00000459201 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 Y_RNA.797-201ENST00000515977 94 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-327P-201ENST00000516270 127 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-229P-201ENST00000516614 102 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 MIR4676-201ENST00000583078 72 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 U6.90-201ENST00000614007 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 U6.70-201ENST00000620287 104 ntBASIC0.5□□□□□ -2.33
RPH3AQ9Y2J0 Y_RNA.23-201ENST00000362496 106 ntBASIC0.49□□□□□ -2.33
RPH3AQ9Y2J0 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
RPH3AQ9Y2J0 Y_RNA.478-201ENST00000384358 107 ntBASIC0.49□□□□□ -2.33
RPH3AQ9Y2J0 Y_RNA.515-201ENST00000384535 112 ntBASIC0.49□□□□□ -2.33
RPH3AQ9Y2J0 MT-TF-201ENST00000387314 71 ntBASIC0.49□□□□□ -2.33
RPH3AQ9Y2J0 RNA5SP237-201ENST00000410414 113 ntBASIC0.49□□□□□ -2.33
RPH3AQ9Y2J0 RNU2-38P-201ENST00000410856 79 ntBASIC0.49□□□□□ -2.33
RPH3AQ9Y2J0 MTND1P19-201ENST00000511780 315 ntBASIC0.49□□□□□ -2.33
RPH3AQ9Y2J0 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
RPH3AQ9Y2J0 MIR4804-201ENST00000581683 73 ntBASIC0.49□□□□□ -2.33
RPH3AQ9Y2J0 Y_RNA.121-201ENST00000363309 113 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 Y_RNA.308-201ENST00000365043 101 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-597P-201ENST00000365620 102 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 MIR573-201ENST00000384964 99 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 RNA5SP63-201ENST00000391225 112 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-893P-201ENST00000458841 100 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-1045P-201ENST00000516321 107 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 RNY3P16-201ENST00000516338 101 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 MIR378D2-201ENST00000580636 98 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 MIR5197-201ENST00000583721 112 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 AC243829.6-201ENST00000612652 106 ntBASIC0.48□□□□□ -2.33
RPH3AQ9Y2J0 AL596211.1-201ENST00000569873 2277 ntBASIC0.47□□□□□ -2.33
RPH3AQ9Y2J0 Y_RNA.60-201ENST00000362831 98 ntBASIC0.47□□□□□ -2.33
RPH3AQ9Y2J0 Y_RNA.65-201ENST00000362846 100 ntBASIC0.47□□□□□ -2.33
RPH3AQ9Y2J0 SNORD27-201ENST00000363981 72 ntBASIC0.47□□□□□ -2.33
RPH3AQ9Y2J0 SNORD12C-201ENST00000386307 89 ntBASIC0.47□□□□□ -2.33
RPH3AQ9Y2J0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.47□□□□□ -2.33
RPH3AQ9Y2J0 RNU6-578P-201ENST00000390980 103 ntBASIC0.47□□□□□ -2.33
RPH3AQ9Y2J0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.47□□□□□ -2.33
RPH3AQ9Y2J0 SNORA62.5-201ENST00000516634 120 ntBASIC0.47□□□□□ -2.33
RPH3AQ9Y2J0 AL365205.2-201ENST00000594586 68 ntBASIC0.47□□□□□ -2.33
RPH3AQ9Y2J0 MIR6717-201ENST00000622747 73 ntBASIC0.47□□□□□ -2.33
RPH3AQ9Y2J0 Y_RNA.162-201ENST00000363683 102 ntBASIC0.46□□□□□ -2.34
RPH3AQ9Y2J0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
RPH3AQ9Y2J0 RNU4-70P-201ENST00000384579 139 ntBASIC0.46□□□□□ -2.34
RPH3AQ9Y2J0 MIR125B2-201ENST00000385128 89 ntBASIC0.46□□□□□ -2.34
RPH3AQ9Y2J0 MTCYBP9-201ENST00000431021 303 ntBASIC0.46□□□□□ -2.34
RPH3AQ9Y2J0 SEPT7P4-201ENST00000437076 306 ntBASIC0.46□□□□□ -2.34
RPH3AQ9Y2J0 RNU7-185P-201ENST00000459215 60 ntBASIC0.46□□□□□ -2.34
RPH3AQ9Y2J0 MIR4514-201ENST00000581410 57 ntBASIC0.46□□□□□ -2.34
RPH3AQ9Y2J0 AC008608.1-201ENST00000603910 127 ntBASIC0.46□□□□□ -2.34
RPH3AQ9Y2J0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
RPH3AQ9Y2J0 Y_RNA.76-201ENST00000362931 109 ntBASIC0.45□□□□□ -2.34
RPH3AQ9Y2J0 MIR140-201ENST00000385282 100 ntBASIC0.45□□□□□ -2.34
RPH3AQ9Y2J0 RNU6-493P-201ENST00000391321 108 ntBASIC0.45□□□□□ -2.34
RPH3AQ9Y2J0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.45□□□□□ -2.34
RPH3AQ9Y2J0 RNU7-56P-201ENST00000458744 62 ntBASIC0.45□□□□□ -2.34
RPH3AQ9Y2J0 AC023932.2-201ENST00000603176 175 ntBASIC0.45□□□□□ -2.34
RPH3AQ9Y2J0 AC091932.4-201ENST00000623386 200 ntBASIC0.45□□□□□ -2.34
RPH3AQ9Y2J0 SNORA25.7-201ENST00000364375 127 ntBASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 RNY4P28-201ENST00000365281 93 ntBASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 Y_RNA.350-201ENST00000365409 98 ntBASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 Y_RNA.430-201ENST00000384081 110 ntBASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 Y_RNA.562-201ENST00000384695 113 ntBASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 RNU4-71P-201ENST00000516258 113 ntBASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 RNU7-156P-201ENST00000517214 74 ntBASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 MIR3612-201ENST00000579753 87 ntBASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 RNU2-4P-201ENST00000606190 192 ntBASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
RPH3AQ9Y2J0 Y_RNA.20-201ENST00000362479 113 ntBASIC0.43□□□□□ -2.34
RPH3AQ9Y2J0 Y_RNA.182-201ENST00000363880 111 ntBASIC0.43□□□□□ -2.34
RPH3AQ9Y2J0 RNA5SP117-201ENST00000365294 118 ntBASIC0.43□□□□□ -2.34
RPH3AQ9Y2J0 SNORD93-201ENST00000408813 74 ntBASIC0.43□□□□□ -2.34
RPH3AQ9Y2J0 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
RPH3AQ9Y2J0 MTND2P23-201ENST00000422990 651 ntBASIC0.43□□□□□ -2.34
RPH3AQ9Y2J0 AL118496.2-201ENST00000448300 230 ntBASIC0.43□□□□□ -2.34
RPH3AQ9Y2J0 MIR4719-201ENST00000585233 84 ntBASIC0.43□□□□□ -2.34
RPH3AQ9Y2J0 AC011921.3-201ENST00000605540 361 ntBASIC0.43□□□□□ -2.34
RPH3AQ9Y2J0 AL162730.1-201ENST00000605734 292 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms