Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 FTX_2.1-201ENST00000618816 94 ntBASIC-0.58□□□□□ -2.5
VCX3BQ9H321 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.59□□□□□ -2.5
VCX3BQ9H321 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.59□□□□□ -2.5
VCX3BQ9H321 RNU6-662P-201ENST00000384253 104 ntBASIC-0.59□□□□□ -2.5
VCX3BQ9H321 RNA5SP127-201ENST00000411051 133 ntBASIC-0.59□□□□□ -2.5
VCX3BQ9H321 RNU6-284P-201ENST00000411105 106 ntBASIC-0.59□□□□□ -2.5
VCX3BQ9H321 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.59□□□□□ -2.5
VCX3BQ9H321 RNU7-79P-201ENST00000516082 62 ntBASIC-0.59□□□□□ -2.5
VCX3BQ9H321 AC040926.1-201ENST00000530195 238 ntBASIC-0.59□□□□□ -2.5
VCX3BQ9H321 MIR4432-201ENST00000581823 84 ntBASIC-0.59□□□□□ -2.5
VCX3BQ9H321 AL590491.3-201ENST00000610731 82 ntBASIC-0.59□□□□□ -2.5
VCX3BQ9H321 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 SNORA8.3-201ENST00000384679 139 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 MIR516B1-201ENST00000385211 90 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 AL731563.1-201ENST00000442202 214 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.6□□□□□ -2.51
VCX3BQ9H321 MTND4LP30-201ENST00000454092 297 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 RNU7-35P-201ENST00000517174 62 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 AC098479.1-201ENST00000609225 154 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 RN7SL660P-201ENST00000614852 299 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 MIR2909-201ENST00000617113 69 ntBASIC-0.6□□□□□ -2.51
VCX3BQ9H321 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 RNU6-509P-201ENST00000363519 107 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 RNU6-865P-201ENST00000364772 107 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 U8.6-201ENST00000364939 135 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 RNU7-152P-201ENST00000458982 64 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 MIR548H5-201ENST00000580314 60 ntBASIC-0.61□□□□□ -2.51
VCX3BQ9H321 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.61□□□□□ -2.51
VCX3BQ9H321 SNORA25.1-201ENST00000362326 128 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 RNY3P5-201ENST00000384127 102 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 RNU4-70P-201ENST00000384579 139 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 MIR613-201ENST00000385248 95 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 MT-TT-201ENST00000387460 66 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 SNRPGP8-201ENST00000454064 226 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 RNU6-893P-201ENST00000458841 100 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 AC114755.3-201ENST00000481111 251 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 RNU7-70P-201ENST00000516941 66 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 AC105081.1-201ENST00000617727 106 ntBASIC-0.62□□□□□ -2.51
VCX3BQ9H321 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 RNU6-290P-201ENST00000365212 101 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 RNU6-480P-201ENST00000384332 107 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.63□□□□□ -2.51
VCX3BQ9H321 TRBVB-201ENST00000477100 408 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 RNU6-277P-201ENST00000516272 106 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 IGLVI-20-201ENST00000519296 130 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 MIR4645-201ENST00000583158 77 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 AL365205.2-201ENST00000594586 68 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 snoU18.1-201ENST00000629629 71 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 AC073869.6-201ENST00000640656 341 ntBASIC-0.63□□□□□ -2.51
VCX3BQ9H321 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.64□□□□□ -2.51
VCX3BQ9H321 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.64□□□□□ -2.51
VCX3BQ9H321 MIR599-201ENST00000385069 95 ntBASIC-0.64□□□□□ -2.51
VCX3BQ9H321 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
VCX3BQ9H321 SNORD115-46-201ENST00000390982 71 ntBASIC-0.64□□□□□ -2.51
VCX3BQ9H321 AC097635.1-201ENST00000450678 155 ntBASIC-0.64□□□□□ -2.51
VCX3BQ9H321 FGF7P6-202ENST00000451282 293 ntBASIC-0.64□□□□□ -2.51
VCX3BQ9H321 RNU7-137P-201ENST00000516788 62 ntBASIC-0.64□□□□□ -2.51
VCX3BQ9H321 AL359881.1-201ENST00000602916 267 ntBASIC-0.64□□□□□ -2.51
VCX3BQ9H321 RNU7-10P-201ENST00000607194 63 ntBASIC-0.64□□□□□ -2.51
VCX3BQ9H321 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 SNORD114-31-201ENST00000363219 75 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 RNU6-449P-201ENST00000383914 107 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 SNORA32-201ENST00000384072 121 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 SNORD116-4-201ENST00000384733 96 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 MIR329-2-201ENST00000385029 84 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 MT-TL1-201ENST00000386347 75 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
VCX3BQ9H321 RNU6-876P-201ENST00000391295 104 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.65□□□□□ -2.51
VCX3BQ9H321 TRAJ51-201ENST00000504127 63 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 RNU7-188P-201ENST00000517063 64 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 uc_338.36-201ENST00000622331 158 ntBASIC-0.65□□□□□ -2.51
VCX3BQ9H321 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.65□□□□□ -2.51
VCX3BQ9H321 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.66□□□□□ -2.52
VCX3BQ9H321 SNORD114-28-201ENST00000363610 72 ntBASIC-0.66□□□□□ -2.52
VCX3BQ9H321 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms