Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 Y_RNA.353-201ENST00000365440 108 ntBASIC1.52□□□□□ -2.17
SMOQ99835 RNU6-1104P-201ENST00000384723 104 ntBASIC1.52□□□□□ -2.17
SMOQ99835 RNU6-735P-201ENST00000410612 107 ntBASIC1.52□□□□□ -2.17
SMOQ99835 RNA5SP136-201ENST00000410906 107 ntBASIC1.52□□□□□ -2.17
SMOQ99835 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
SMOQ99835 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.52□□□□□ -2.17
SMOQ99835 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
SMOQ99835 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
SMOQ99835 AP003716.2-201ENST00000528260 108 ntBASIC1.52□□□□□ -2.17
SMOQ99835 AC022523.2-201ENST00000561045 150 ntBASIC1.52□□□□□ -2.17
SMOQ99835 SNORA4-201ENST00000584302 138 ntBASIC1.52□□□□□ -2.17
SMOQ99835 AL512598.1-201ENST00000610158 273 ntBASIC1.52□□□□□ -2.17
SMOQ99835 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.52□□□□□ -2.17
SMOQ99835 Y_RNA.430-201ENST00000384081 110 ntBASIC1.51□□□□□ -2.17
SMOQ99835 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
SMOQ99835 MT-TI-201ENST00000387365 69 ntBASIC1.51□□□□□ -2.17
SMOQ99835 RNA5SP261-201ENST00000410536 106 ntBASIC1.51□□□□□ -2.17
SMOQ99835 RNU6-602P-201ENST00000411155 105 ntBASIC1.51□□□□□ -2.17
SMOQ99835 AL022718.1-201ENST00000412004 84 ntBASIC1.51□□□□□ -2.17
SMOQ99835 RPS3AP1-201ENST00000413190 320 ntBASIC1.51□□□□□ -2.17
SMOQ99835 AL133373.1-201ENST00000497098 94 ntBASIC1.51□□□□□ -2.17
SMOQ99835 AC004812.1-201ENST00000540773 146 ntBASIC1.51□□□□□ -2.17
SMOQ99835 PRELID3BP2-201ENST00000605362 201 ntBASIC1.51□□□□□ -2.17
SMOQ99835 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SMOQ99835 Y_RNA.346-201ENST00000365385 112 ntBASIC1.5□□□□□ -2.17
SMOQ99835 COX6CP6-201ENST00000490840 228 ntBASIC1.5□□□□□ -2.17
SMOQ99835 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.5□□□□□ -2.17
SMOQ99835 CYP3A52P-201ENST00000563326 91 ntBASIC1.5□□□□□ -2.17
SMOQ99835 MIR8065-201ENST00000620577 100 ntBASIC1.5□□□□□ -2.17
SMOQ99835 AL121890.5-201ENST00000620848 304 ntBASIC1.5□□□□□ -2.17
SMOQ99835 U6.95-201ENST00000636931 70 ntBASIC1.5□□□□□ -2.17
SMOQ99835 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SMOQ99835 ZNF209P-201ENST00000593450 2304 ntBASIC1.5□□□□□ -2.17
SMOQ99835 RNU6-42P-201ENST00000384165 107 ntBASIC1.49□□□□□ -2.17
SMOQ99835 MIR1185-1-201ENST00000408598 86 ntBASIC1.49□□□□□ -2.17
SMOQ99835 AC048334.1-201ENST00000477975 159 ntBASIC1.49□□□□□ -2.17
SMOQ99835 RN7SKP88-201ENST00000516847 250 ntBASIC1.49□□□□□ -2.17
SMOQ99835 7SK.8-201ENST00000612110 250 ntBASIC1.49□□□□□ -2.17
SMOQ99835 7SK.11-201ENST00000615477 250 ntBASIC1.49□□□□□ -2.17
SMOQ99835 7SK.13-201ENST00000622040 250 ntBASIC1.49□□□□□ -2.17
SMOQ99835 RNA5SP264-201ENST00000363115 107 ntBASIC1.48□□□□□ -2.17
SMOQ99835 Y_RNA.198-201ENST00000364013 98 ntBASIC1.48□□□□□ -2.17
SMOQ99835 Y_RNA.470-201ENST00000384307 117 ntBASIC1.48□□□□□ -2.17
SMOQ99835 Y_RNA.531-201ENST00000384589 121 ntBASIC1.48□□□□□ -2.17
SMOQ99835 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.48□□□□□ -2.17
SMOQ99835 AC245047.7-201ENST00000440265 293 ntBASIC1.48□□□□□ -2.17
SMOQ99835 RNU7-113P-201ENST00000459273 62 ntBASIC1.48□□□□□ -2.17
SMOQ99835 AL078603.1-201ENST00000603824 313 ntBASIC1.48□□□□□ -2.17
SMOQ99835 MIR6734-201ENST00000621166 68 ntBASIC1.48□□□□□ -2.17
SMOQ99835 RNU6-893P-201ENST00000458841 100 ntBASIC1.47□□□□□ -2.17
SMOQ99835 RNA5SP480-201ENST00000516840 109 ntBASIC1.47□□□□□ -2.17
SMOQ99835 MTND5P34-201ENST00000568888 325 ntBASIC1.47□□□□□ -2.17
SMOQ99835 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.47□□□□□ -2.17
SMOQ99835 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
SMOQ99835 MIR103A2-201ENST00000362154 78 ntBASIC1.46□□□□□ -2.18
SMOQ99835 Y_RNA.273-201ENST00000364703 102 ntBASIC1.46□□□□□ -2.18
SMOQ99835 SNORD12C-201ENST00000386307 89 ntBASIC1.46□□□□□ -2.18
SMOQ99835 RNU6-1054P-201ENST00000411293 104 ntBASIC1.46□□□□□ -2.18
SMOQ99835 Y_RNA.629-201ENST00000411368 105 ntBASIC1.46□□□□□ -2.18
SMOQ99835 AC244023.1-201ENST00000426884 112 ntBASIC1.46□□□□□ -2.18
SMOQ99835 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.46□□□□□ -2.18
SMOQ99835 Y_RNA.649-201ENST00000459077 103 ntBASIC1.46□□□□□ -2.18
SMOQ99835 AC113410.1-201ENST00000505029 247 ntBASIC1.46□□□□□ -2.18
SMOQ99835 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
SMOQ99835 RNU1-92P-201ENST00000517017 135 ntBASIC1.46□□□□□ -2.18
SMOQ99835 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
SMOQ99835 AC242498.1-201ENST00000604134 111 ntBASIC1.46□□□□□ -2.18
SMOQ99835 AL670379.3-201ENST00000605040 251 ntBASIC1.46□□□□□ -2.18
SMOQ99835 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
SMOQ99835 SNORD115-2-201ENST00000362842 82 ntBASIC1.45□□□□□ -2.18
SMOQ99835 SNORD115-20-201ENST00000365099 82 ntBASIC1.45□□□□□ -2.18
SMOQ99835 RNU6-1144P-201ENST00000384247 104 ntBASIC1.45□□□□□ -2.18
SMOQ99835 SNORD38B-201ENST00000384690 67 ntBASIC1.45□□□□□ -2.18
SMOQ99835 RNU6-476P-201ENST00000384726 107 ntBASIC1.45□□□□□ -2.18
SMOQ99835 MIR548A1-201ENST00000385041 97 ntBASIC1.45□□□□□ -2.18
SMOQ99835 MIR548A3-201ENST00000385297 97 ntBASIC1.45□□□□□ -2.18
SMOQ99835 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.45□□□□□ -2.18
SMOQ99835 RNU6-1064P-201ENST00000410626 104 ntBASIC1.45□□□□□ -2.18
SMOQ99835 RPS23P4-201ENST00000487908 423 ntBASIC1.45□□□□□ -2.18
SMOQ99835 SNORA31.2-201ENST00000516019 134 ntBASIC1.45□□□□□ -2.18
SMOQ99835 MIR6129-201ENST00000616087 109 ntBASIC1.45□□□□□ -2.18
SMOQ99835 SNORD38B-202ENST00000625943 69 ntBASIC1.45□□□□□ -2.18
SMOQ99835 MIR6516-201ENST00000630554 81 ntBASIC1.45□□□□□ -2.18
SMOQ99835 RNU6-834P-201ENST00000362367 110 ntBASIC1.44□□□□□ -2.18
SMOQ99835 SNORA7.1-201ENST00000363750 139 ntBASIC1.44□□□□□ -2.18
SMOQ99835 Y_RNA.213-201ENST00000364178 111 ntBASIC1.44□□□□□ -2.18
SMOQ99835 RNU6-654P-201ENST00000364373 107 ntBASIC1.44□□□□□ -2.18
SMOQ99835 RNU6-396P-201ENST00000365369 105 ntBASIC1.44□□□□□ -2.18
SMOQ99835 Y_RNA.363-201ENST00000365529 113 ntBASIC1.44□□□□□ -2.18
SMOQ99835 RNU6-342P-201ENST00000384521 104 ntBASIC1.44□□□□□ -2.18
SMOQ99835 RNU6-429P-201ENST00000384582 108 ntBASIC1.44□□□□□ -2.18
SMOQ99835 RNA5SP33-201ENST00000516687 98 ntBASIC1.44□□□□□ -2.18
SMOQ99835 MIR548AE2-201ENST00000583456 67 ntBASIC1.44□□□□□ -2.18
SMOQ99835 MIR6504-201ENST00000613520 61 ntBASIC1.44□□□□□ -2.18
SMOQ99835 Y_RNA.327-201ENST00000365201 102 ntBASIC1.43□□□□□ -2.18
SMOQ99835 Y_RNA.354-201ENST00000365448 111 ntBASIC1.43□□□□□ -2.18
SMOQ99835 RNU6-1056P-201ENST00000383996 107 ntBASIC1.43□□□□□ -2.18
SMOQ99835 MIR1270-201ENST00000459320 83 ntBASIC1.43□□□□□ -2.18
SMOQ99835 RNA5SP220-201ENST00000516298 104 ntBASIC1.43□□□□□ -2.18
SMOQ99835 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms