Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
SNX27Q96L92 AL596211.1-201ENST00000569873 2277 ntBASIC1.32□□□□□ -2.2
SNX27Q96L92 MTND5P32-201ENST00000560711 1802 ntBASIC1.32□□□□□ -2.2
SNX27Q96L92 Y_RNA.180-201ENST00000363867 113 ntBASIC1.32□□□□□ -2.2
SNX27Q96L92 Y_RNA.330-201ENST00000365230 109 ntBASIC1.32□□□□□ -2.2
SNX27Q96L92 Y_RNA.454-201ENST00000384224 113 ntBASIC1.32□□□□□ -2.2
SNX27Q96L92 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
SNX27Q96L92 SNORA75.2-201ENST00000391138 150 ntBASIC1.32□□□□□ -2.2
SNX27Q96L92 SNORA75.3-201ENST00000391231 150 ntBASIC1.32□□□□□ -2.2
SNX27Q96L92 AL392103.1-201ENST00000447000 198 ntBASIC1.32□□□□□ -2.2
SNX27Q96L92 SCARNA15-202ENST00000516881 127 ntBASIC1.32□□□□□ -2.2
SNX27Q96L92 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
SNX27Q96L92 RNU6-1130P-201ENST00000365434 107 ntBASIC1.31□□□□□ -2.2
SNX27Q96L92 RNU6-449P-201ENST00000383914 107 ntBASIC1.31□□□□□ -2.2
SNX27Q96L92 Y_RNA.398-201ENST00000383952 99 ntBASIC1.31□□□□□ -2.2
SNX27Q96L92 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SNX27Q96L92 RNU4-61P-201ENST00000411243 107 ntBASIC1.31□□□□□ -2.2
SNX27Q96L92 RNA5SP272-201ENST00000516095 111 ntBASIC1.31□□□□□ -2.2
SNX27Q96L92 SEPT14P17-201ENST00000617978 177 ntBASIC1.31□□□□□ -2.2
SNX27Q96L92 AC091932.4-201ENST00000623386 200 ntBASIC1.31□□□□□ -2.2
SNX27Q96L92 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
SNX27Q96L92 Y_RNA.52-201ENST00000362760 96 ntBASIC1.3□□□□□ -2.2
SNX27Q96L92 RNU6-396P-201ENST00000365369 105 ntBASIC1.3□□□□□ -2.2
SNX27Q96L92 SNORD116-18-201ENST00000383961 92 ntBASIC1.3□□□□□ -2.2
SNX27Q96L92 RNA5SP266-201ENST00000410273 108 ntBASIC1.3□□□□□ -2.2
SNX27Q96L92 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.3□□□□□ -2.2
SNX27Q96L92 RNU7-21P-201ENST00000459430 62 ntBASIC1.3□□□□□ -2.2
SNX27Q96L92 MIR3144-201ENST00000579460 79 ntBASIC1.3□□□□□ -2.2
SNX27Q96L92 AC131055.1-201ENST00000584626 316 ntBASIC1.3□□□□□ -2.2
SNX27Q96L92 MIR8055-201ENST00000610739 97 ntBASIC1.3□□□□□ -2.2
SNX27Q96L92 MIR6516-201ENST00000630554 81 ntBASIC1.3□□□□□ -2.2
SNX27Q96L92 AL391516.1-201ENST00000554380 2449 ntBASIC1.29□□□□□ -2.2
SNX27Q96L92 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
SNX27Q96L92 Y_RNA.170-201ENST00000363746 110 ntBASIC1.29□□□□□ -2.2
SNX27Q96L92 RNU6-151P-201ENST00000364158 107 ntBASIC1.29□□□□□ -2.2
SNX27Q96L92 Y_RNA.506-201ENST00000384494 102 ntBASIC1.29□□□□□ -2.2
SNX27Q96L92 SNORD12-201ENST00000391002 90 ntBASIC1.29□□□□□ -2.2
SNX27Q96L92 Y_RNA.580-201ENST00000391004 95 ntBASIC1.29□□□□□ -2.2
SNX27Q96L92 MIR936-201ENST00000401264 98 ntBASIC1.29□□□□□ -2.2
SNX27Q96L92 MIR2115-201ENST00000516657 100 ntBASIC1.29□□□□□ -2.2
SNX27Q96L92 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.29□□□□□ -2.2
SNX27Q96L92 AC027335.2-201ENST00000624030 375 ntBASIC1.29□□□□□ -2.2
SNX27Q96L92 MIR373-201ENST00000362273 69 ntBASIC1.28□□□□□ -2.2
SNX27Q96L92 RNU4-11P-201ENST00000365287 132 ntBASIC1.28□□□□□ -2.2
SNX27Q96L92 Y_RNA.457-201ENST00000384237 111 ntBASIC1.28□□□□□ -2.2
SNX27Q96L92 Y_RNA.497-201ENST00000384447 98 ntBASIC1.28□□□□□ -2.2
SNX27Q96L92 RNU6-125P-201ENST00000384505 107 ntBASIC1.28□□□□□ -2.2
SNX27Q96L92 RNA5SP25-201ENST00000410815 110 ntBASIC1.28□□□□□ -2.2
SNX27Q96L92 AC090844.1-201ENST00000422019 156 ntBASIC1.28□□□□□ -2.2
SNX27Q96L92 RNU7-45P-201ENST00000459460 63 ntBASIC1.28□□□□□ -2.2
SNX27Q96L92 AC112693.2-201ENST00000556538 232 ntBASIC1.28□□□□□ -2.2
SNX27Q96L92 Y_RNA.778-201ENST00000620203 90 ntBASIC1.28□□□□□ -2.2
SNX27Q96L92 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SNX27Q96L92 RNU6-654P-201ENST00000364373 107 ntBASIC1.27□□□□□ -2.21
SNX27Q96L92 SNORA1.1-201ENST00000364671 133 ntBASIC1.27□□□□□ -2.21
SNX27Q96L92 MIR1912-201ENST00000410389 80 ntBASIC1.27□□□□□ -2.21
SNX27Q96L92 RNU6-1190P-201ENST00000410811 104 ntBASIC1.27□□□□□ -2.21
SNX27Q96L92 MRPL35P3-201ENST00000421557 364 ntBASIC1.27□□□□□ -2.21
SNX27Q96L92 AC063976.4-201ENST00000421971 163 ntBASIC1.27□□□□□ -2.21
SNX27Q96L92 AC002429.1-201ENST00000437672 148 ntBASIC1.27□□□□□ -2.21
SNX27Q96L92 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.27□□□□□ -2.21
SNX27Q96L92 RNU7-90P-201ENST00000459216 62 ntBASIC1.27□□□□□ -2.21
SNX27Q96L92 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
SNX27Q96L92 RNU7-40P-201ENST00000516397 64 ntBASIC1.27□□□□□ -2.21
SNX27Q96L92 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SNX27Q96L92 Y_RNA.464-201ENST00000384282 110 ntBASIC1.26□□□□□ -2.21
SNX27Q96L92 SNORA20-201ENST00000384662 132 ntBASIC1.26□□□□□ -2.21
SNX27Q96L92 SNORD38B-201ENST00000384690 67 ntBASIC1.26□□□□□ -2.21
SNX27Q96L92 RNA5SP67-201ENST00000516422 131 ntBASIC1.26□□□□□ -2.21
SNX27Q96L92 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.26□□□□□ -2.21
SNX27Q96L92 SNORD38B-202ENST00000625943 69 ntBASIC1.26□□□□□ -2.21
SNX27Q96L92 Z97988.1-201ENST00000637697 135 ntBASIC1.26□□□□□ -2.21
SNX27Q96L92 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SNX27Q96L92 RNY1P11-201ENST00000363759 113 ntBASIC1.25□□□□□ -2.21
SNX27Q96L92 Y_RNA.584-201ENST00000391090 114 ntBASIC1.25□□□□□ -2.21
SNX27Q96L92 RNA5SP95-201ENST00000410319 137 ntBASIC1.25□□□□□ -2.21
SNX27Q96L92 RNU6-613P-201ENST00000410412 108 ntBASIC1.25□□□□□ -2.21
SNX27Q96L92 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
SNX27Q96L92 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
SNX27Q96L92 AC023827.1-201ENST00000569247 97 ntBASIC1.25□□□□□ -2.21
SNX27Q96L92 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.25□□□□□ -2.21
SNX27Q96L92 MIR5589-201ENST00000579442 60 ntBASIC1.25□□□□□ -2.21
SNX27Q96L92 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
SNX27Q96L92 AP000753.3-201ENST00000604083 169 ntBASIC1.25□□□□□ -2.21
SNX27Q96L92 MIR6717-201ENST00000622747 73 ntBASIC1.25□□□□□ -2.21
SNX27Q96L92 SNORD18B-201ENST00000365659 72 ntBASIC1.24□□□□□ -2.21
SNX27Q96L92 RNU6-746P-201ENST00000384112 109 ntBASIC1.24□□□□□ -2.21
SNX27Q96L92 SNORA19-201ENST00000384737 128 ntBASIC1.24□□□□□ -2.21
SNX27Q96L92 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
SNX27Q96L92 RNA5SP261-201ENST00000410536 106 ntBASIC1.24□□□□□ -2.21
SNX27Q96L92 RNU7-200P-201ENST00000516105 62 ntBASIC1.24□□□□□ -2.21
SNX27Q96L92 SNORA25.12-201ENST00000516202 82 ntBASIC1.24□□□□□ -2.21
SNX27Q96L92 Y_RNA.703-201ENST00000516846 111 ntBASIC1.24□□□□□ -2.21
SNX27Q96L92 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.24□□□□□ -2.21
SNX27Q96L92 MIR3152-201ENST00000579801 74 ntBASIC1.24□□□□□ -2.21
SNX27Q96L92 U2.22-201ENST00000636441 106 ntBASIC1.24□□□□□ -2.21
SNX27Q96L92 MIR6759-201ENST00000638110 65 ntBASIC1.24□□□□□ -2.21
SNX27Q96L92 RNU6-1319P-201ENST00000390855 104 ntBASIC1.23□□□□□ -2.21
SNX27Q96L92 RNU6-747P-201ENST00000390928 104 ntBASIC1.23□□□□□ -2.21
SNX27Q96L92 RNU6-241P-201ENST00000391148 104 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 229.4 ms