Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AL589743.1-201ENST00000551932 2712 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 RNU6-275P-201ENST00000364910 107 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.430-201ENST00000384081 110 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.435-201ENST00000384095 112 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.454-201ENST00000384224 113 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 MIR588-201ENST00000384900 83 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 MIR520H-201ENST00000385126 88 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 RNU6-1165P-201ENST00000410119 107 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 AC098934.3-201ENST00000430450 190 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 MTND5P15-201ENST00000434246 349 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 SEPT7P4-201ENST00000437076 306 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 MIR18B-201ENST00000454574 71 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.797-201ENST00000515977 94 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 RNU6-111P-201ENST00000517179 105 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 MIR3149-201ENST00000584629 83 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 MIR6717-201ENST00000622747 73 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 AC010332.2-201ENST00000613083 1904 ntBASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SNRNP40Q96DI7 MIR302B-201ENST00000362188 73 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.307-201ENST00000365022 117 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 RNU6-643P-201ENST00000384018 107 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 RNU6-574P-201ENST00000384265 107 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 MIR624-201ENST00000385217 97 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 SNORD12C-201ENST00000386307 89 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 RNA5SP261-201ENST00000410536 106 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 AC092628.1-201ENST00000436250 252 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 SCARNA15-202ENST00000516881 127 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 MIR4804-201ENST00000581683 73 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 MIR4676-201ENST00000583078 72 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 AC020891.4-201ENST00000605745 93 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 MIR8087-201ENST00000612745 78 ntBASIC0.56□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.75-201ENST00000362927 97 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.182-201ENST00000363880 111 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 SNORA20.1-201ENST00000364790 130 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.412-201ENST00000384001 104 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 RNU6-463P-201ENST00000384340 107 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 RNU4-70P-201ENST00000384579 139 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 MIR573-201ENST00000384964 99 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 RNU6-918P-201ENST00000391219 106 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 RNA5SP127-201ENST00000411051 133 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 MIR6841-201ENST00000637129 72 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 AL596211.1-201ENST00000569873 2277 ntBASIC0.55□□□□□ -2.32
SNRNP40Q96DI7 MIR30D-201ENST00000362283 70 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.144-201ENST00000363521 113 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 RNY1P8-201ENST00000383970 114 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 MT-TF-201ENST00000387314 71 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 RNU6-1319P-201ENST00000390855 104 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 RNU6-747P-201ENST00000390928 104 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 RNU6-241P-201ENST00000391148 104 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 AL078595.1-201ENST00000404458 226 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 RNU6-177P-201ENST00000411257 104 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 RNU6-229P-201ENST00000516614 102 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 MRPS18CP4-201ENST00000535821 231 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 AL162730.1-201ENST00000605734 292 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 AL109933.3-201ENST00000619095 188 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
SNRNP40Q96DI7 MIR330-201ENST00000362196 94 ntBASIC0.53□□□□□ -2.32
SNRNP40Q96DI7 MIR411-201ENST00000362239 96 ntBASIC0.53□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.251-201ENST00000364551 99 ntBASIC0.53□□□□□ -2.32
SNRNP40Q96DI7 RNU6-597P-201ENST00000365620 102 ntBASIC0.53□□□□□ -2.32
SNRNP40Q96DI7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SNRNP40Q96DI7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.53□□□□□ -2.32
SNRNP40Q96DI7 RNU7-56P-201ENST00000458744 62 ntBASIC0.53□□□□□ -2.32
SNRNP40Q96DI7 AC009779.6-201ENST00000603972 165 ntBASIC0.53□□□□□ -2.32
SNRNP40Q96DI7 U6.106-201ENST00000636360 105 ntBASIC0.53□□□□□ -2.32
SNRNP40Q96DI7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
SNRNP40Q96DI7 Y_RNA.200-201ENST00000364018 102 ntBASIC0.52□□□□□ -2.33
SNRNP40Q96DI7 MIR5087-201ENST00000635826 76 ntBASIC0.52□□□□□ -2.33
SNRNP40Q96DI7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 Y_RNA.83-201ENST00000363005 113 ntBASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 Y_RNA.85-201ENST00000363014 111 ntBASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 RNU6-716P-201ENST00000365621 103 ntBASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 RNU6-1336P-201ENST00000383886 109 ntBASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 MIR125B2-201ENST00000385128 89 ntBASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 RNU7-185P-201ENST00000459215 60 ntBASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 RNU6-1149P-201ENST00000516810 97 ntBASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 MIR4431-201ENST00000579990 94 ntBASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 AC021613.1-201ENST00000623880 111 ntBASIC0.51□□□□□ -2.33
SNRNP40Q96DI7 SNORA25.7-201ENST00000364375 127 ntBASIC0.5□□□□□ -2.33
SNRNP40Q96DI7 RNU6-364P-201ENST00000384387 107 ntBASIC0.5□□□□□ -2.33
SNRNP40Q96DI7 MIR140-201ENST00000385282 100 ntBASIC0.5□□□□□ -2.33
SNRNP40Q96DI7 MIR938-201ENST00000401216 83 ntBASIC0.5□□□□□ -2.33
SNRNP40Q96DI7 MIR1257-201ENST00000408490 117 ntBASIC0.5□□□□□ -2.33
SNRNP40Q96DI7 MIR1197-201ENST00000408818 88 ntBASIC0.5□□□□□ -2.33
SNRNP40Q96DI7 MIR3152-201ENST00000579801 74 ntBASIC0.5□□□□□ -2.33
SNRNP40Q96DI7 SNORD92-201ENST00000585078 85 ntBASIC0.5□□□□□ -2.33
SNRNP40Q96DI7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms