Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MIR548I2-201ENST00000408348 149 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 RNU2-51P-201ENST00000410708 197 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 snoU13.25-201ENST00000458945 104 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 AC048334.1-201ENST00000477975 159 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 RNU7-123P-201ENST00000515911 60 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 SNORA31.2-201ENST00000516019 134 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 RNU6-781P-201ENST00000516377 101 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 RNU2-35P-201ENST00000516446 142 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 RNY4P20-201ENST00000516678 93 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 IGKV1-22-201ENST00000524313 326 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 AP003716.2-201ENST00000528260 108 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 snoU13.31-201ENST00000607291 104 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 U6.95-201ENST00000636931 70 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 MIR6841-201ENST00000637129 72 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 Y_RNA.261-201ENST00000364631 102 ntBASIC1.33□□□□□ -2.2
CTHRC1Q96CG8 MIR1185-1-201ENST00000408598 86 ntBASIC1.33□□□□□ -2.2
CTHRC1Q96CG8 MIR1302-7-201ENST00000408841 72 ntBASIC1.33□□□□□ -2.2
CTHRC1Q96CG8 COX6CP6-201ENST00000490840 228 ntBASIC1.33□□□□□ -2.2
CTHRC1Q96CG8 AC113410.1-201ENST00000505029 247 ntBASIC1.33□□□□□ -2.2
CTHRC1Q96CG8 AC004812.1-201ENST00000540773 146 ntBASIC1.33□□□□□ -2.2
CTHRC1Q96CG8 Y_RNA.198-201ENST00000364013 98 ntBASIC1.32□□□□□ -2.2
CTHRC1Q96CG8 Y_RNA.213-201ENST00000364178 111 ntBASIC1.32□□□□□ -2.2
CTHRC1Q96CG8 Y_RNA.299-201ENST00000364973 94 ntBASIC1.32□□□□□ -2.2
CTHRC1Q96CG8 RNA5SP33-201ENST00000516687 98 ntBASIC1.32□□□□□ -2.2
CTHRC1Q96CG8 MIR3914-2-201ENST00000637339 95 ntBASIC1.32□□□□□ -2.2
CTHRC1Q96CG8 SNORD115-2-201ENST00000362842 82 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 Y_RNA.118-201ENST00000363300 101 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 Y_RNA.171-201ENST00000363760 102 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 SNORD115-20-201ENST00000365099 82 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 MIRLET7F2-201ENST00000385277 83 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 MT-TN-201ENST00000387400 73 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 AC090844.1-201ENST00000422019 156 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 AL512326.2-201ENST00000426359 151 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 MIR4264-201ENST00000583520 66 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 SEPT14P17-201ENST00000617978 177 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 MTND5P18-201ENST00000445624 1801 ntBASIC1.31□□□□□ -2.2
CTHRC1Q96CG8 RNA5SP205-201ENST00000364653 136 ntBASIC1.3□□□□□ -2.2
CTHRC1Q96CG8 SNORA80D-201ENST00000384488 135 ntBASIC1.3□□□□□ -2.2
CTHRC1Q96CG8 Y_RNA.525-201ENST00000384570 113 ntBASIC1.3□□□□□ -2.2
CTHRC1Q96CG8 SNORA22C-201ENST00000384614 134 ntBASIC1.3□□□□□ -2.2
CTHRC1Q96CG8 Y_RNA.563-201ENST00000384707 108 ntBASIC1.3□□□□□ -2.2
CTHRC1Q96CG8 Y_RNA.630-201ENST00000411370 108 ntBASIC1.3□□□□□ -2.2
CTHRC1Q96CG8 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
CTHRC1Q96CG8 RNU6-1258P-201ENST00000516911 111 ntBASIC1.3□□□□□ -2.2
CTHRC1Q96CG8 SNORA70.22-201ENST00000517160 124 ntBASIC1.3□□□□□ -2.2
CTHRC1Q96CG8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.3□□□□□ -2.2
CTHRC1Q96CG8 MIR6516-201ENST00000630554 81 ntBASIC1.3□□□□□ -2.2
CTHRC1Q96CG8 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
CTHRC1Q96CG8 Y_RNA.330-201ENST00000365230 109 ntBASIC1.29□□□□□ -2.2
CTHRC1Q96CG8 SNORD12C-201ENST00000386307 89 ntBASIC1.29□□□□□ -2.2
CTHRC1Q96CG8 RNU6-910P-201ENST00000390844 107 ntBASIC1.29□□□□□ -2.2
CTHRC1Q96CG8 RNU6-613P-201ENST00000410412 108 ntBASIC1.29□□□□□ -2.2
CTHRC1Q96CG8 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
CTHRC1Q96CG8 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
CTHRC1Q96CG8 AC244023.1-201ENST00000426884 112 ntBASIC1.29□□□□□ -2.2
CTHRC1Q96CG8 RNA5SP61-201ENST00000516453 100 ntBASIC1.29□□□□□ -2.2
CTHRC1Q96CG8 AC242498.1-201ENST00000604134 111 ntBASIC1.29□□□□□ -2.2
CTHRC1Q96CG8 Y_RNA.291-201ENST00000364886 113 ntBASIC1.28□□□□□ -2.2
CTHRC1Q96CG8 Y_RNA.508-201ENST00000384502 114 ntBASIC1.28□□□□□ -2.2
CTHRC1Q96CG8 MIR548A3-201ENST00000385297 97 ntBASIC1.28□□□□□ -2.2
CTHRC1Q96CG8 RNA5SP237-201ENST00000410414 113 ntBASIC1.28□□□□□ -2.2
CTHRC1Q96CG8 MIR4421-201ENST00000578133 69 ntBASIC1.28□□□□□ -2.2
CTHRC1Q96CG8 MIR3163-201ENST00000581592 73 ntBASIC1.28□□□□□ -2.2
CTHRC1Q96CG8 RNY4P6-201ENST00000363667 96 ntBASIC1.27□□□□□ -2.21
CTHRC1Q96CG8 Y_RNA.470-201ENST00000384307 117 ntBASIC1.27□□□□□ -2.21
CTHRC1Q96CG8 RNU4-69P-201ENST00000410677 143 ntBASIC1.27□□□□□ -2.21
CTHRC1Q96CG8 snoU13.2-201ENST00000459201 104 ntBASIC1.27□□□□□ -2.21
CTHRC1Q96CG8 RPS23P4-201ENST00000487908 423 ntBASIC1.27□□□□□ -2.21
CTHRC1Q96CG8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 MIR377-201ENST00000362145 69 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 RNU6-834P-201ENST00000362367 110 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 RNY1P10-201ENST00000363268 113 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 SNORA18-201ENST00000384416 132 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 RNU6-1104P-201ENST00000384723 104 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 RNU6-1237P-201ENST00000384777 107 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 MIR588-201ENST00000384900 83 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 MIR499A-201ENST00000384903 122 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 MIR222-201ENST00000384992 110 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 RNU6-205P-201ENST00000390858 107 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 SNORD77B-201ENST00000391112 67 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 Y_RNA.649-201ENST00000459077 103 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 AL670379.3-201ENST00000605040 251 ntBASIC1.26□□□□□ -2.21
CTHRC1Q96CG8 SNORA7.1-201ENST00000363750 139 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 SNORA25.9-201ENST00000365087 128 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 SNORD12-201ENST00000391002 90 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 RNU6-321P-201ENST00000410912 106 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 RNU7-62P-201ENST00000458856 62 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 RNU7-21P-201ENST00000459430 62 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 TRMT112P2-201ENST00000512910 132 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 SNORD79.1-201ENST00000516069 84 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 RNU7-6P-201ENST00000516845 62 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 AC022523.2-201ENST00000561045 150 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 AL359821.1-201ENST00000605519 182 ntBASIC1.25□□□□□ -2.21
CTHRC1Q96CG8 Y_RNA.168-201ENST00000363740 102 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms