Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNU6-168P-201ENST00000516189 101 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 RNU6-830P-201ENST00000516353 107 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 RNA5SP170-201ENST00000517150 101 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 RNU7-181P-201ENST00000517234 74 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 AC091932.4-201ENST00000623386 200 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 SNORD33-201ENST00000362761 85 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 Y_RNA.85-201ENST00000363014 111 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 SNORA63.5-201ENST00000363548 123 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 Y_RNA.213-201ENST00000364178 111 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 Y_RNA.298-201ENST00000364960 107 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 RNU6-106P-201ENST00000384405 107 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 Y_RNA.494-201ENST00000384432 111 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.33□□□□□ -2.2
SNED1Q8TER0 AC093850.1-201ENST00000454121 251 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 AC107297.1-201ENST00000459991 176 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 MIR4305-201ENST00000583252 102 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 AL589743.1-201ENST00000551932 2712 ntBASIC1.33□□□□□ -2.2
SNED1Q8TER0 MIR516B2-201ENST00000385190 85 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 HSPE1P24-201ENST00000450782 238 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 uc_338.28-201ENST00000612082 187 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.32□□□□□ -2.2
SNED1Q8TER0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SNED1Q8TER0 Y_RNA.43-201ENST00000362670 111 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 Y_RNA.309-201ENST00000365046 111 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 Y_RNA.370-201ENST00000365589 108 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 RNU6-32P-201ENST00000383948 107 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 RNU6-13P-201ENST00000384248 107 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 Y_RNA.495-201ENST00000384435 112 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 RNU6-12P-201ENST00000384604 107 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 RNU6-1104P-201ENST00000384723 104 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 RNU6-41P-201ENST00000384741 107 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 MIR136-201ENST00000385207 82 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 MIR1302-5-201ENST00000408164 150 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 RNU2-11P-201ENST00000459191 187 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 RNU7-34P-201ENST00000459394 64 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 RNU7-123P-201ENST00000515911 60 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 RNA5SP476-201ENST00000516613 103 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 MIR4709-201ENST00000577272 72 ntBASIC1.32□□□□□ -2.2
SNED1Q8TER0 SNORD115-34-201ENST00000362441 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-12-201ENST00000362583 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 Y_RNA.49-201ENST00000362714 112 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-29-201ENST00000362834 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-9-201ENST00000362912 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-21-201ENST00000362963 81 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-14-201ENST00000363090 81 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-13-201ENST00000363358 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 RNU6-1255P-201ENST00000363434 112 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-41-201ENST00000363608 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-11-201ENST00000363616 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-5-201ENST00000363633 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-39-201ENST00000363694 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-4-201ENST00000363810 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-16-201ENST00000363887 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-6-201ENST00000363942 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-42-201ENST00000364273 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 RNU4-16P-201ENST00000364737 141 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-15-201ENST00000364809 81 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-1-201ENST00000364961 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-26-201ENST00000365067 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-10-201ENST00000365073 81 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORA1.2-201ENST00000365189 134 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-43-201ENST00000365503 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-36-201ENST00000365629 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 RNU6-1014P-201ENST00000383940 103 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 MIR452-201ENST00000385020 85 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 MIR216A-201ENST00000385063 110 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 MT-TI-201ENST00000387365 69 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 AL035398.1-201ENST00000430869 322 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 JTBP1-201ENST00000441314 247 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.31□□□□□ -2.2
SNED1Q8TER0 RNU1-98P-201ENST00000458992 160 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 RPS29P24-201ENST00000486345 171 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 RNU6-998P-201ENST00000515894 101 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 RNA5SP481-201ENST00000516814 122 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 RNA5SP437-201ENST00000517249 129 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.31□□□□□ -2.2
SNED1Q8TER0 MIR4295-201ENST00000585286 85 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 SNORD115-40-201ENST00000606510 82 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 AC106754.2-201ENST00000623006 233 ntBASIC1.31□□□□□ -2.2
SNED1Q8TER0 Y_RNA.362-201ENST00000365518 110 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 SNORA51.5-201ENST00000384126 131 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 RNU6-296P-201ENST00000384608 107 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 RNU6-554P-201ENST00000410466 106 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 RNU7-67P-201ENST00000459003 62 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 snoU13.27-201ENST00000459278 104 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 RNU7-96P-201ENST00000459535 64 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 RNU2-35P-201ENST00000516446 142 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 RNU6-958P-201ENST00000516995 106 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 RNU6-902P-201ENST00000517212 91 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 RNU6-537P-201ENST00000517277 103 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 MIR3973-201ENST00000579824 107 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 AC021506.2-201ENST00000612354 169 ntBASIC1.3□□□□□ -2.2
SNED1Q8TER0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
SNED1Q8TER0 Y_RNA.163-201ENST00000363702 113 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 RNU6-756P-201ENST00000383997 107 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 RNU6-439P-201ENST00000384188 106 ntBASIC1.29□□□□□ -2.2
SNED1Q8TER0 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 253 ms