Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC060780.3-201ENST00000589464 80 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 AC122108.2-201ENST00000611946 526 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 RNU6-801P-201ENST00000364087 105 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 RNY1P2-201ENST00000364820 117 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 MTATP6P19-201ENST00000413797 659 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 SNORA13-201ENST00000458790 133 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 MIR3908-201ENST00000579798 126 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 MIR204-201ENST00000385200 110 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 SNORD77B-201ENST00000391112 67 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 AC244090.1-201ENST00000441884 93 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.17□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNY4P28-201ENST00000365281 93 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 AC244250.2-201ENST00000418731 148 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 AL162413.1-201ENST00000603198 110 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 SNORD115-2-201ENST00000362842 82 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 SNORD115-20-201ENST00000365099 82 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU1-115P-201ENST00000365329 160 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-831P-201ENST00000384548 107 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU7-53P-201ENST00000516705 60 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 MIR6854-201ENST00000614935 69 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-908P-201ENST00000410160 94 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 AC107399.1-201ENST00000451226 265 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 SNORA40.17-201ENST00000517256 115 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 MIR3179-1-201ENST00000578940 84 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 MIR3179-2-201ENST00000579107 84 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 MIR3179-3-201ENST00000579566 84 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 MIR3179-4-201ENST00000617599 84 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 AC048344.4-201ENST00000619744 527 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-653P-201ENST00000363074 106 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 AC013791.1-201ENST00000616619 62 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-597P-201ENST00000365620 102 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 SNORA20-201ENST00000384662 132 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 MIR617-201ENST00000385030 97 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-256P-201ENST00000516747 97 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 AC140658.3-201ENST00000567603 271 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 MIR5688-201ENST00000580619 83 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 AL670379.3-201ENST00000605040 251 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 uc_338.10-201ENST00000621872 182 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 SNORD116-29-201ENST00000384516 83 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 MIR2053-201ENST00000459295 91 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 AC055872.1-201ENST00000570978 278 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 MIR4423-201ENST00000580922 80 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 AC093726.3-201ENST00000637588 150 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 RNU6-490P-201ENST00000362985 107 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 SNORD115-23-201ENST00000364461 82 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 U8.20-201ENST00000459445 131 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 MTND5P40-201ENST00000559945 246 ntBASIC-0.18□□□□□ -2.44
SYNE1Q8NF91 SNORA25.7-201ENST00000364375 127 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 MIR624-201ENST00000385217 97 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-763P-201ENST00000390865 106 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 AC099799.1-201ENST00000439809 192 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-415P-201ENST00000516252 97 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-118P-201ENST00000516552 102 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 AP003733.2-201ENST00000529409 171 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 U2.1-201ENST00000618978 145 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 SNORD115-19-201ENST00000363098 82 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 SNORD115-18-201ENST00000363293 82 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 SNORD115-17-201ENST00000364612 82 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 AC244505.6-201ENST00000452829 130 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 AL391099.1-201ENST00000624635 187 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 MIR367-201ENST00000362299 68 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-900P-201ENST00000384498 102 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 SNORD36C-201ENST00000516733 66 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 AC037487.3-201ENST00000606668 112 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 AC091932.4-201ENST00000623386 200 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 SNORD24-201ENST00000383884 75 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-455P-201ENST00000384681 107 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-291P-201ENST00000384720 107 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 RNU6-913P-201ENST00000390913 95 ntBASIC-0.19□□□□□ -2.44
SYNE1Q8NF91 SNORA79-201ENST00000408376 140 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms