Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MIR3646-201ENST00000578301 84 ntBASIC0.92□□□□□ -2.26
CCDC38Q502W7 AC013244.2-201ENST00000603396 103 ntBASIC0.92□□□□□ -2.26
CCDC38Q502W7 Y_RNA.52-201ENST00000362760 96 ntBASIC0.91□□□□□ -2.26
CCDC38Q502W7 MIR489-201ENST00000384923 84 ntBASIC0.91□□□□□ -2.26
CCDC38Q502W7 MT-TF-201ENST00000387314 71 ntBASIC0.91□□□□□ -2.26
CCDC38Q502W7 SNORA75.5-201ENST00000391291 81 ntBASIC0.91□□□□□ -2.26
CCDC38Q502W7 RNU6-893P-201ENST00000458841 100 ntBASIC0.91□□□□□ -2.26
CCDC38Q502W7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC38Q502W7 RMST_2.1-201ENST00000617263 136 ntBASIC0.91□□□□□ -2.26
CCDC38Q502W7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC38Q502W7 MIR6841-201ENST00000637129 72 ntBASIC0.91□□□□□ -2.26
CCDC38Q502W7 RNU4-84P-201ENST00000364200 139 ntBASIC0.9□□□□□ -2.27
CCDC38Q502W7 RNU6-818P-201ENST00000364837 108 ntBASIC0.9□□□□□ -2.27
CCDC38Q502W7 Y_RNA.785-201ENST00000384290 109 ntBASIC0.9□□□□□ -2.27
CCDC38Q502W7 MIR605-201ENST00000385078 83 ntBASIC0.9□□□□□ -2.27
CCDC38Q502W7 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
CCDC38Q502W7 MIR4698-201ENST00000577795 80 ntBASIC0.9□□□□□ -2.27
CCDC38Q502W7 MIR4676-201ENST00000583078 72 ntBASIC0.9□□□□□ -2.27
CCDC38Q502W7 MIR151B-201ENST00000584249 96 ntBASIC0.9□□□□□ -2.27
CCDC38Q502W7 AC104465.1-201ENST00000611365 139 ntBASIC0.9□□□□□ -2.27
CCDC38Q502W7 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
CCDC38Q502W7 MIR6844-201ENST00000637122 62 ntBASIC0.9□□□□□ -2.27
CCDC38Q502W7 SNORA22.1-201ENST00000362701 134 ntBASIC0.89□□□□□ -2.27
CCDC38Q502W7 RNU6-1082P-201ENST00000364574 107 ntBASIC0.89□□□□□ -2.27
CCDC38Q502W7 MIR520F-201ENST00000384824 87 ntBASIC0.89□□□□□ -2.27
CCDC38Q502W7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC38Q502W7 RNU7-121P-201ENST00000516604 62 ntBASIC0.89□□□□□ -2.27
CCDC38Q502W7 SNORA81.3-201ENST00000517283 198 ntBASIC0.89□□□□□ -2.27
CCDC38Q502W7 MIR4804-201ENST00000581683 73 ntBASIC0.89□□□□□ -2.27
CCDC38Q502W7 AC020891.4-201ENST00000605745 93 ntBASIC0.89□□□□□ -2.27
CCDC38Q502W7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC38Q502W7 MIR30D-201ENST00000362283 70 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 RNU6-1318P-201ENST00000365389 103 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 RNY1P6-201ENST00000384193 109 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 RNU6-110P-201ENST00000384508 104 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 AC015818.7-201ENST00000428754 109 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 AC087499.7-201ENST00000441958 109 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 Y_RNA.662-201ENST00000516028 97 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 RNU6-861P-201ENST00000516745 106 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 MIR6788-201ENST00000618842 66 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 MIR6767-201ENST00000637302 66 ntBASIC0.88□□□□□ -2.27
CCDC38Q502W7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC38Q502W7 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
CCDC38Q502W7 RNU1-119P-201ENST00000391122 165 ntBASIC0.87□□□□□ -2.27
CCDC38Q502W7 RNA5SP237-201ENST00000410414 113 ntBASIC0.87□□□□□ -2.27
CCDC38Q502W7 RNU5E-9P-201ENST00000411164 104 ntBASIC0.87□□□□□ -2.27
CCDC38Q502W7 RNA5SP236-201ENST00000516169 116 ntBASIC0.87□□□□□ -2.27
CCDC38Q502W7 RNU6-1223P-201ENST00000517124 104 ntBASIC0.87□□□□□ -2.27
CCDC38Q502W7 AC023934.1-201ENST00000574529 2389 ntBASIC0.87□□□□□ -2.27
CCDC38Q502W7 RNU6-682P-201ENST00000363843 106 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 MIR938-201ENST00000401216 83 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 MIR1257-201ENST00000408490 117 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 MIR548J-201ENST00000408833 112 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 RNU7-185P-201ENST00000459215 60 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC38Q502W7 AC011195.1-201ENST00000578177 177 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 DNAJC19P2-201ENST00000593340 302 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 FAM71BP1-201ENST00000604431 523 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 AC004792.1-201ENST00000614523 137 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 AL662814.1-201ENST00000617364 121 ntBASIC0.86□□□□□ -2.27
CCDC38Q502W7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CCDC38Q502W7 RNU4-16P-201ENST00000364737 141 ntBASIC0.85□□□□□ -2.27
CCDC38Q502W7 Y_RNA.441-201ENST00000384123 112 ntBASIC0.85□□□□□ -2.27
CCDC38Q502W7 MIR520H-201ENST00000385126 88 ntBASIC0.85□□□□□ -2.27
CCDC38Q502W7 MIR125B2-201ENST00000385128 89 ntBASIC0.85□□□□□ -2.27
CCDC38Q502W7 RNU6-1135P-201ENST00000411083 103 ntBASIC0.85□□□□□ -2.27
CCDC38Q502W7 MTATP6P21-201ENST00000440681 189 ntBASIC0.85□□□□□ -2.27
CCDC38Q502W7 RNU7-56P-201ENST00000458744 62 ntBASIC0.85□□□□□ -2.27
CCDC38Q502W7 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
CCDC38Q502W7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.85□□□□□ -2.27
CCDC38Q502W7 MIR6515-201ENST00000619843 57 ntBASIC0.85□□□□□ -2.27
CCDC38Q502W7 RNU6-349P-201ENST00000362402 107 ntBASIC0.84□□□□□ -2.27
CCDC38Q502W7 Y_RNA.497-201ENST00000384447 98 ntBASIC0.84□□□□□ -2.27
CCDC38Q502W7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.84□□□□□ -2.27
CCDC38Q502W7 RNU6-588P-201ENST00000410281 105 ntBASIC0.84□□□□□ -2.27
CCDC38Q502W7 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.84□□□□□ -2.27
CCDC38Q502W7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
CCDC38Q502W7 MIR573-201ENST00000384964 99 ntBASIC0.83□□□□□ -2.28
CCDC38Q502W7 SNORD37.2-201ENST00000391075 66 ntBASIC0.83□□□□□ -2.28
CCDC38Q502W7 MTND5P15-201ENST00000434246 349 ntBASIC0.83□□□□□ -2.28
CCDC38Q502W7 AC011603.4-201ENST00000611325 277 ntBASIC0.83□□□□□ -2.28
CCDC38Q502W7 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
CCDC38Q502W7 RNU6-447P-201ENST00000410293 104 ntBASIC0.82□□□□□ -2.28
CCDC38Q502W7 RNU6-1118P-201ENST00000410382 104 ntBASIC0.82□□□□□ -2.28
CCDC38Q502W7 RNU6-1076P-201ENST00000410397 104 ntBASIC0.82□□□□□ -2.28
CCDC38Q502W7 RNU6-355P-201ENST00000410427 104 ntBASIC0.82□□□□□ -2.28
CCDC38Q502W7 RNU6-791P-201ENST00000410467 104 ntBASIC0.82□□□□□ -2.28
CCDC38Q502W7 RNU6-705P-201ENST00000410601 104 ntBASIC0.82□□□□□ -2.28
CCDC38Q502W7 RNU6-1100P-201ENST00000410691 104 ntBASIC0.82□□□□□ -2.28
CCDC38Q502W7 RNU6-860P-201ENST00000410860 104 ntBASIC0.82□□□□□ -2.28
CCDC38Q502W7 RNU6-1217P-201ENST00000411276 104 ntBASIC0.82□□□□□ -2.28
CCDC38Q502W7 RNU6-785P-201ENST00000411324 104 ntBASIC0.82□□□□□ -2.28
CCDC38Q502W7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC38Q502W7 RPL39P25-201ENST00000449384 154 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms