Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC091951.2-201ENST00000500762 203 ntBASIC-2.5□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.809-201ENST00000516058 95 ntBASIC-2.5□□□□□ -2.81
CCDC58Q4VC31 AP003461.1-201ENST00000528866 78 ntBASIC-2.5□□□□□ -2.81
CCDC58Q4VC31 AC027449.1-201ENST00000608890 407 ntBASIC-2.5□□□□□ -2.81
CCDC58Q4VC31 U4.2-201ENST00000618561 85 ntBASIC-2.5□□□□□ -2.81
CCDC58Q4VC31 RNU6-228P-201ENST00000362700 106 ntBASIC-2.51□□□□□ -2.81
CCDC58Q4VC31 RNU6-1260P-201ENST00000362944 107 ntBASIC-2.51□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.135-201ENST00000363439 95 ntBASIC-2.51□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.51□□□□□ -2.81
CCDC58Q4VC31 MIR4662B-201ENST00000579498 81 ntBASIC-2.51□□□□□ -2.81
CCDC58Q4VC31 MIR4308-201ENST00000580634 81 ntBASIC-2.51□□□□□ -2.81
CCDC58Q4VC31 AL008718.3-201ENST00000610217 321 ntBASIC-2.51□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.27-201ENST00000362540 103 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 SNORD115-33-201ENST00000363723 82 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.201-201ENST00000364052 96 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 SNORD61-201ENST00000384252 73 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 MIR487B-201ENST00000385021 84 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 SNORA26.4-201ENST00000391188 123 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 RNU6-337P-201ENST00000391243 106 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 AL078595.1-201ENST00000404458 226 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.644-201ENST00000459006 113 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 RNU6-720P-201ENST00000516363 108 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 AL049861.1-201ENST00000603130 150 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 AC097520.1-201ENST00000624435 385 ntBASIC-2.52□□□□□ -2.81
CCDC58Q4VC31 RNU6-888P-201ENST00000363010 101 ntBASIC-2.53□□□□□ -2.81
CCDC58Q4VC31 RNY4P6-201ENST00000363667 96 ntBASIC-2.53□□□□□ -2.81
CCDC58Q4VC31 RNU6-1189P-201ENST00000383958 107 ntBASIC-2.53□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.486-201ENST00000384398 107 ntBASIC-2.53□□□□□ -2.81
CCDC58Q4VC31 RNU4-70P-201ENST00000384579 139 ntBASIC-2.53□□□□□ -2.81
CCDC58Q4VC31 RNU6-1104P-201ENST00000384723 104 ntBASIC-2.53□□□□□ -2.81
CCDC58Q4VC31 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.53□□□□□ -2.81
CCDC58Q4VC31 AF228730.3-201ENST00000436691 102 ntBASIC-2.53□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.631-201ENST00000459607 101 ntBASIC-2.53□□□□□ -2.81
CCDC58Q4VC31 Y_RNA.665-201ENST00000516177 98 ntBASIC-2.53□□□□□ -2.81
CCDC58Q4VC31 RNU6-1270P-201ENST00000517128 108 ntBASIC-2.53□□□□□ -2.81
CCDC58Q4VC31 AL353193.1-201ENST00000421444 268 ntBASIC-2.54□□□□□ -2.82
CCDC58Q4VC31 AL160004.2-201ENST00000432935 350 ntBASIC-2.54□□□□□ -2.82
CCDC58Q4VC31 RNU7-141P-201ENST00000459304 62 ntBASIC-2.54□□□□□ -2.82
CCDC58Q4VC31 RNU6-732P-201ENST00000516033 103 ntBASIC-2.54□□□□□ -2.82
CCDC58Q4VC31 RNU6-287P-201ENST00000516230 98 ntBASIC-2.54□□□□□ -2.82
CCDC58Q4VC31 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-2.54□□□□□ -2.82
CCDC58Q4VC31 ZNF519P2-201ENST00000557032 169 ntBASIC-2.54□□□□□ -2.82
CCDC58Q4VC31 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.55□□□□□ -2.82
CCDC58Q4VC31 Y_RNA.351-201ENST00000365436 96 ntBASIC-2.55□□□□□ -2.82
CCDC58Q4VC31 RNU6-20P-201ENST00000384106 107 ntBASIC-2.55□□□□□ -2.82
CCDC58Q4VC31 MTCO2P19-201ENST00000427513 598 ntBASIC-2.55□□□□□ -2.82
CCDC58Q4VC31 MIR2355-201ENST00000517199 87 ntBASIC-2.55□□□□□ -2.82
CCDC58Q4VC31 AL021707.8-201ENST00000609428 183 ntBASIC-2.55□□□□□ -2.82
CCDC58Q4VC31 RNU6-208P-201ENST00000362431 107 ntBASIC-2.56□□□□□ -2.82
CCDC58Q4VC31 RNU6-1252P-201ENST00000363054 104 ntBASIC-2.56□□□□□ -2.82
CCDC58Q4VC31 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.56□□□□□ -2.82
CCDC58Q4VC31 SNORD115-27-201ENST00000364430 82 ntBASIC-2.56□□□□□ -2.82
CCDC58Q4VC31 SNORD114-3-201ENST00000364969 75 ntBASIC-2.56□□□□□ -2.82
CCDC58Q4VC31 AC024067.1-201ENST00000426199 223 ntBASIC-2.56□□□□□ -2.82
CCDC58Q4VC31 AC108019.1-201ENST00000512540 175 ntBASIC-2.56□□□□□ -2.82
CCDC58Q4VC31 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.56□□□□□ -2.82
CCDC58Q4VC31 AL627230.5-201ENST00000619807 58 ntBASIC-2.56□□□□□ -2.82
CCDC58Q4VC31 Y_RNA.231-201ENST00000364358 102 ntBASIC-2.57□□□□□ -2.82
CCDC58Q4VC31 Y_RNA.239-201ENST00000364444 113 ntBASIC-2.57□□□□□ -2.82
CCDC58Q4VC31 Y_RNA.372-201ENST00000365599 102 ntBASIC-2.57□□□□□ -2.82
CCDC58Q4VC31 AL365203.2-201ENST00000423444 196 ntBASIC-2.57□□□□□ -2.82
CCDC58Q4VC31 MIR6888-201ENST00000621977 67 ntBASIC-2.57□□□□□ -2.82
CCDC58Q4VC31 RNU6-1059P-201ENST00000363752 98 ntBASIC-2.58□□□□□ -2.82
CCDC58Q4VC31 SNORD75.2-201ENST00000408784 58 ntBASIC-2.58□□□□□ -2.82
CCDC58Q4VC31 SNORD63B-201ENST00000411005 70 ntBASIC-2.58□□□□□ -2.82
CCDC58Q4VC31 AL593851.1-201ENST00000426171 157 ntBASIC-2.58□□□□□ -2.82
CCDC58Q4VC31 MTND2P39-201ENST00000457230 764 ntBASIC-2.58□□□□□ -2.82
CCDC58Q4VC31 SNORD77.4-201ENST00000516158 81 ntBASIC-2.58□□□□□ -2.82
CCDC58Q4VC31 RNU7-35P-201ENST00000517174 62 ntBASIC-2.58□□□□□ -2.82
CCDC58Q4VC31 AC005014.2-201ENST00000607795 599 ntBASIC-2.58□□□□□ -2.82
CCDC58Q4VC31 FGF7P2-201ENST00000332473 296 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 RNU6-626P-201ENST00000363354 107 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 RNY3P4-201ENST00000384428 101 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 MIR513B-201ENST00000385136 84 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 SNORD115-47-201ENST00000391226 86 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 FGF7P6-202ENST00000451282 293 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 RNU7-80P-201ENST00000459562 61 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 MTCO2P4-201ENST00000517968 247 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 AC091932.4-201ENST00000623386 200 ntBASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-2.59□□□□□ -2.82
CCDC58Q4VC31 SNORD115-19-201ENST00000363098 82 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 SNORD115-18-201ENST00000363293 82 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 Y_RNA.212-201ENST00000364177 102 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 SNORD115-17-201ENST00000364612 82 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 SNORD115-20-201ENST00000365099 82 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 RNY3-201ENST00000365484 102 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 RNU6-1103P-201ENST00000384150 107 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 Y_RNA.454-201ENST00000384224 113 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 RNU6-842P-201ENST00000384269 107 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 Y_RNA.601-201ENST00000410500 113 ntBASIC-2.6□□□□□ -2.83
CCDC58Q4VC31 RNU6-261P-201ENST00000459506 102 ntBASIC-2.6□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 209.4 ms