Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RPL39P25-201ENST00000449384 154 ntBASIC0.76□□□□□ -2.29
RHBDL3P58872 RNU6-643P-201ENST00000384018 107 ntBASIC0.75□□□□□ -2.29
RHBDL3P58872 Y_RNA.571-201ENST00000384753 98 ntBASIC0.75□□□□□ -2.29
RHBDL3P58872 SNORA26.6-201ENST00000391256 115 ntBASIC0.75□□□□□ -2.29
RHBDL3P58872 RNA5SP237-201ENST00000410414 113 ntBASIC0.75□□□□□ -2.29
RHBDL3P58872 Y_RNA.626-201ENST00000411288 95 ntBASIC0.75□□□□□ -2.29
RHBDL3P58872 SEPT7P4-201ENST00000437076 306 ntBASIC0.75□□□□□ -2.29
RHBDL3P58872 AL118496.2-201ENST00000448300 230 ntBASIC0.75□□□□□ -2.29
RHBDL3P58872 RNU7-56P-201ENST00000458744 62 ntBASIC0.75□□□□□ -2.29
RHBDL3P58872 RNU7-185P-201ENST00000459215 60 ntBASIC0.75□□□□□ -2.29
RHBDL3P58872 RNU4-54P-201ENST00000516428 129 ntBASIC0.75□□□□□ -2.29
RHBDL3P58872 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
RHBDL3P58872 AC020891.4-201ENST00000605745 93 ntBASIC0.75□□□□□ -2.29
RHBDL3P58872 Y_RNA.182-201ENST00000363880 111 ntBASIC0.74□□□□□ -2.29
RHBDL3P58872 RNU6-978P-201ENST00000364371 103 ntBASIC0.74□□□□□ -2.29
RHBDL3P58872 SNORA25.7-201ENST00000364375 127 ntBASIC0.74□□□□□ -2.29
RHBDL3P58872 MIR624-201ENST00000385217 97 ntBASIC0.74□□□□□ -2.29
RHBDL3P58872 SCARNA15.1-201ENST00000516384 125 ntBASIC0.74□□□□□ -2.29
RHBDL3P58872 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.74□□□□□ -2.29
RHBDL3P58872 Y_RNA.193-201ENST00000363979 102 ntBASIC0.73□□□□□ -2.29
RHBDL3P58872 RNU6-275P-201ENST00000364910 107 ntBASIC0.73□□□□□ -2.29
RHBDL3P58872 RNU6-702P-201ENST00000364982 107 ntBASIC0.73□□□□□ -2.29
RHBDL3P58872 MIR140-201ENST00000385282 100 ntBASIC0.73□□□□□ -2.29
RHBDL3P58872 SNORD12C-201ENST00000386307 89 ntBASIC0.73□□□□□ -2.29
RHBDL3P58872 RNU6-1023P-201ENST00000516137 106 ntBASIC0.73□□□□□ -2.29
RHBDL3P58872 MIR376A2-201ENST00000636782 80 ntBASIC0.73□□□□□ -2.29
RHBDL3P58872 SNORA20.1-201ENST00000364790 130 ntBASIC0.72□□□□□ -2.29
RHBDL3P58872 Y_RNA.477-201ENST00000384352 108 ntBASIC0.72□□□□□ -2.29
RHBDL3P58872 AC015818.7-201ENST00000428754 109 ntBASIC0.72□□□□□ -2.29
RHBDL3P58872 AC092628.1-201ENST00000436250 252 ntBASIC0.72□□□□□ -2.29
RHBDL3P58872 AC087499.7-201ENST00000441958 109 ntBASIC0.72□□□□□ -2.29
RHBDL3P58872 RNY3P16-201ENST00000516338 101 ntBASIC0.72□□□□□ -2.29
RHBDL3P58872 MIR4711-201ENST00000578274 70 ntBASIC0.72□□□□□ -2.29
RHBDL3P58872 MIR3612-201ENST00000579753 87 ntBASIC0.72□□□□□ -2.29
RHBDL3P58872 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.72□□□□□ -2.29
RHBDL3P58872 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
RHBDL3P58872 RNA5SP347-201ENST00000362445 119 ntBASIC0.71□□□□□ -2.3
RHBDL3P58872 RNU6-945P-201ENST00000383947 107 ntBASIC0.71□□□□□ -2.3
RHBDL3P58872 MIR568-201ENST00000385036 95 ntBASIC0.71□□□□□ -2.3
RHBDL3P58872 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
RHBDL3P58872 MTND3P2-201ENST00000438452 342 ntBASIC0.71□□□□□ -2.3
RHBDL3P58872 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.71□□□□□ -2.3
RHBDL3P58872 RN7SKP12-201ENST00000516275 143 ntBASIC0.71□□□□□ -2.3
RHBDL3P58872 RNU7-156P-201ENST00000517214 74 ntBASIC0.71□□□□□ -2.3
RHBDL3P58872 uc_338.6-201ENST00000613544 171 ntBASIC0.71□□□□□ -2.3
RHBDL3P58872 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
RHBDL3P58872 MIR30D-201ENST00000362283 70 ntBASIC0.7□□□□□ -2.3
RHBDL3P58872 RNU6-923P-201ENST00000364753 107 ntBASIC0.7□□□□□ -2.3
RHBDL3P58872 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
RHBDL3P58872 RNU6-196P-201ENST00000384315 107 ntBASIC0.7□□□□□ -2.3
RHBDL3P58872 Y_RNA.539-201ENST00000384635 107 ntBASIC0.7□□□□□ -2.3
RHBDL3P58872 RNU6-1237P-201ENST00000384777 107 ntBASIC0.7□□□□□ -2.3
RHBDL3P58872 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.7□□□□□ -2.3
RHBDL3P58872 AC098934.3-201ENST00000430450 190 ntBASIC0.7□□□□□ -2.3
RHBDL3P58872 AC090897.1-201ENST00000580909 226 ntBASIC0.7□□□□□ -2.3
RHBDL3P58872 SNORD92-201ENST00000585078 85 ntBASIC0.7□□□□□ -2.3
RHBDL3P58872 MIR18A-201ENST00000362310 71 ntBASIC0.69□□□□□ -2.3
RHBDL3P58872 RNU7-45P-201ENST00000459460 63 ntBASIC0.69□□□□□ -2.3
RHBDL3P58872 MIR3128-201ENST00000581957 66 ntBASIC0.69□□□□□ -2.3
RHBDL3P58872 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.69□□□□□ -2.3
RHBDL3P58872 AC021613.1-201ENST00000623880 111 ntBASIC0.69□□□□□ -2.3
RHBDL3P58872 Y_RNA.75-201ENST00000362927 97 ntBASIC0.68□□□□□ -2.3
RHBDL3P58872 SNORD100-201ENST00000408573 76 ntBASIC0.68□□□□□ -2.3
RHBDL3P58872 RNU7-102P-201ENST00000458948 62 ntBASIC0.68□□□□□ -2.3
RHBDL3P58872 AL662814.1-201ENST00000617364 121 ntBASIC0.68□□□□□ -2.3
RHBDL3P58872 SNORA22.1-201ENST00000362701 134 ntBASIC0.67□□□□□ -2.3
RHBDL3P58872 Y_RNA.521-201ENST00000384560 114 ntBASIC0.67□□□□□ -2.3
RHBDL3P58872 SNORD93-201ENST00000408813 74 ntBASIC0.67□□□□□ -2.3
RHBDL3P58872 MIR4308-201ENST00000580634 81 ntBASIC0.67□□□□□ -2.3
RHBDL3P58872 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
RHBDL3P58872 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
RHBDL3P58872 Y_RNA.435-201ENST00000384095 112 ntBASIC0.66□□□□□ -2.3
RHBDL3P58872 Y_RNA.452-201ENST00000384202 108 ntBASIC0.66□□□□□ -2.3
RHBDL3P58872 RNU6-1149P-201ENST00000516810 97 ntBASIC0.66□□□□□ -2.3
RHBDL3P58872 AL162730.1-201ENST00000605734 292 ntBASIC0.66□□□□□ -2.3
RHBDL3P58872 MIR6841-201ENST00000637129 72 ntBASIC0.66□□□□□ -2.3
RHBDL3P58872 AL589743.1-201ENST00000551932 2712 ntBASIC0.66□□□□□ -2.3
RHBDL3P58872 SNORD114-23-201ENST00000363536 72 ntBASIC0.65□□□□□ -2.31
RHBDL3P58872 RNU6-597P-201ENST00000365620 102 ntBASIC0.65□□□□□ -2.31
RHBDL3P58872 MRPS18CP4-201ENST00000535821 231 ntBASIC0.65□□□□□ -2.31
RHBDL3P58872 uc_338.17-201ENST00000619633 179 ntBASIC0.65□□□□□ -2.31
RHBDL3P58872 uc_338.16-201ENST00000621804 95 ntBASIC0.65□□□□□ -2.31
RHBDL3P58872 AC010487.4-201ENST00000637027 61 ntBASIC0.65□□□□□ -2.31
RHBDL3P58872 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
RHBDL3P58872 RNA5SP117-201ENST00000365294 118 ntBASIC0.64□□□□□ -2.31
RHBDL3P58872 MIR193B-201ENST00000384907 83 ntBASIC0.64□□□□□ -2.31
RHBDL3P58872 SCARNA15-202ENST00000516881 127 ntBASIC0.64□□□□□ -2.31
RHBDL3P58872 MIR4431-201ENST00000579990 94 ntBASIC0.64□□□□□ -2.31
RHBDL3P58872 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.64□□□□□ -2.31
RHBDL3P58872 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
RHBDL3P58872 Y_RNA.60-201ENST00000362831 98 ntBASIC0.63□□□□□ -2.31
RHBDL3P58872 Y_RNA.200-201ENST00000364018 102 ntBASIC0.63□□□□□ -2.31
RHBDL3P58872 Y_RNA.447-201ENST00000384184 113 ntBASIC0.63□□□□□ -2.31
RHBDL3P58872 RNU4-83P-201ENST00000410863 133 ntBASIC0.63□□□□□ -2.31
RHBDL3P58872 RNU5E-9P-201ENST00000411164 104 ntBASIC0.63□□□□□ -2.31
RHBDL3P58872 RNU6-448P-201ENST00000517052 107 ntBASIC0.63□□□□□ -2.31
RHBDL3P58872 AP003327.1-201ENST00000529684 127 ntBASIC0.63□□□□□ -2.31
RHBDL3P58872 AC243829.3-201ENST00000622177 108 ntBASIC0.63□□□□□ -2.31
RHBDL3P58872 Y_RNA.83-201ENST00000363005 113 ntBASIC0.62□□□□□ -2.31
RHBDL3P58872 AC002350.1-201ENST00000490759 375 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 270.9 ms