Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SNORD89-201ENST00000390981 114 ntBASIC0.68□□□□□ -2.3
HMGCS2P54868 MIR1827-201ENST00000408549 66 ntBASIC0.68□□□□□ -2.3
HMGCS2P54868 SEPT7P4-201ENST00000437076 306 ntBASIC0.68□□□□□ -2.3
HMGCS2P54868 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.68□□□□□ -2.3
HMGCS2P54868 RNU6-229P-201ENST00000516614 102 ntBASIC0.68□□□□□ -2.3
HMGCS2P54868 MIR6717-201ENST00000622747 73 ntBASIC0.68□□□□□ -2.3
HMGCS2P54868 SNORD38B-202ENST00000625943 69 ntBASIC0.68□□□□□ -2.3
HMGCS2P54868 RNU6-597P-201ENST00000365620 102 ntBASIC0.67□□□□□ -2.3
HMGCS2P54868 MIR605-201ENST00000385078 83 ntBASIC0.67□□□□□ -2.3
HMGCS2P54868 SNORD12C-201ENST00000386307 89 ntBASIC0.67□□□□□ -2.3
HMGCS2P54868 RNA5SP127-201ENST00000411051 133 ntBASIC0.67□□□□□ -2.3
HMGCS2P54868 SNORD83.1-201ENST00000411362 77 ntBASIC0.67□□□□□ -2.3
HMGCS2P54868 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
HMGCS2P54868 Y_RNA.644-201ENST00000459006 113 ntBASIC0.67□□□□□ -2.3
HMGCS2P54868 RNU7-80P-201ENST00000459562 61 ntBASIC0.67□□□□□ -2.3
HMGCS2P54868 Y_RNA.674-201ENST00000516362 113 ntBASIC0.67□□□□□ -2.3
HMGCS2P54868 RNU6-1110P-201ENST00000516462 101 ntBASIC0.67□□□□□ -2.3
HMGCS2P54868 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.67□□□□□ -2.3
HMGCS2P54868 RNU6-312P-201ENST00000364629 107 ntBASIC0.66□□□□□ -2.3
HMGCS2P54868 RNU6-768P-201ENST00000384683 107 ntBASIC0.66□□□□□ -2.3
HMGCS2P54868 RNU6-994P-201ENST00000410507 111 ntBASIC0.66□□□□□ -2.3
HMGCS2P54868 AC015818.7-201ENST00000428754 109 ntBASIC0.66□□□□□ -2.3
HMGCS2P54868 AC087499.7-201ENST00000441958 109 ntBASIC0.66□□□□□ -2.3
HMGCS2P54868 RNU7-62P-201ENST00000458856 62 ntBASIC0.66□□□□□ -2.3
HMGCS2P54868 snoU13.2-201ENST00000459201 104 ntBASIC0.66□□□□□ -2.3
HMGCS2P54868 RNU6-1149P-201ENST00000516810 97 ntBASIC0.66□□□□□ -2.3
HMGCS2P54868 AL589743.1-201ENST00000551932 2712 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 AL596211.1-201ENST00000569873 2277 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 RNU6-1082P-201ENST00000364574 107 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 RNU6-200P-201ENST00000364743 107 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 RNU6-934P-201ENST00000365154 107 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 Y_RNA.476-201ENST00000384347 108 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 MIR588-201ENST00000384900 83 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 MIR563-201ENST00000385080 79 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 RNU6-1319P-201ENST00000390855 104 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 RNU6-747P-201ENST00000390928 104 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 RNU6-241P-201ENST00000391148 104 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 RNU6-177P-201ENST00000411257 104 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 AC113410.1-201ENST00000505029 247 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 RNU6-138P-201ENST00000515952 107 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.65□□□□□ -2.31
HMGCS2P54868 AL353765.1-201ENST00000605514 183 ntBASIC0.65□□□□□ -2.31
HMGCS2P54868 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.65□□□□□ -2.31
HMGCS2P54868 MIR302B-201ENST00000362188 73 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 SNORA25.7-201ENST00000364375 127 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 Y_RNA.430-201ENST00000384081 110 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 Y_RNA.454-201ENST00000384224 113 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 Y_RNA.515-201ENST00000384535 112 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 Y_RNA.552-201ENST00000384665 112 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 AC072026.1-201ENST00000605023 201 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 AC020891.4-201ENST00000605745 93 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 MIR6841-201ENST00000637129 72 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 MTND5P32-201ENST00000560711 1802 ntBASIC0.64□□□□□ -2.31
HMGCS2P54868 MIR1-1-201ENST00000362147 71 ntBASIC0.63□□□□□ -2.31
HMGCS2P54868 Y_RNA.30-201ENST00000362572 97 ntBASIC0.63□□□□□ -2.31
HMGCS2P54868 RNU6-682P-201ENST00000363843 106 ntBASIC0.63□□□□□ -2.31
HMGCS2P54868 SNORD99-201ENST00000408612 74 ntBASIC0.63□□□□□ -2.31
HMGCS2P54868 RNU6-1165P-201ENST00000410119 107 ntBASIC0.63□□□□□ -2.31
HMGCS2P54868 RNU5E-9P-201ENST00000411164 104 ntBASIC0.63□□□□□ -2.31
HMGCS2P54868 AC067940.1-201ENST00000458411 300 ntBASIC0.63□□□□□ -2.31
HMGCS2P54868 RNU7-121P-201ENST00000516604 62 ntBASIC0.63□□□□□ -2.31
HMGCS2P54868 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.63□□□□□ -2.31
HMGCS2P54868 AC104465.1-201ENST00000611365 139 ntBASIC0.63□□□□□ -2.31
HMGCS2P54868 AC010332.2-201ENST00000613083 1904 ntBASIC0.63□□□□□ -2.31
HMGCS2P54868 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 MIR30D-201ENST00000362283 70 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 Y_RNA.52-201ENST00000362760 96 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 Y_RNA.258-201ENST00000364613 105 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 RNU6-110P-201ENST00000384508 104 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 Y_RNA.521-201ENST00000384560 114 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 Y_RNA.793-201ENST00000411222 111 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 RNU7-120P-201ENST00000459334 63 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 AC107027.2-201ENST00000512197 115 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 RNA5SP236-201ENST00000516169 116 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 RNA5SP330-201ENST00000517096 96 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 AP002392.1-201ENST00000537692 208 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGCS2P54868 MIR4771-2-201ENST00000577758 74 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 AC025627.3-201ENST00000582078 182 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 MIR4771-1-201ENST00000582617 74 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 AC021613.1-201ENST00000623880 111 ntBASIC0.62□□□□□ -2.31
HMGCS2P54868 RNY1P11-201ENST00000363759 113 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 RNU4-84P-201ENST00000364200 139 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 Y_RNA.240-201ENST00000364469 95 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 Y_RNA.257-201ENST00000364596 102 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 Y_RNA.374-201ENST00000365606 101 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 SNORD105-201ENST00000386910 85 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 AC244098.3-201ENST00000424803 96 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 MIR18B-201ENST00000454574 71 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 RNU6-861P-201ENST00000516745 106 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 MIR4804-201ENST00000581683 73 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 MIR4676-201ENST00000583078 72 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 AL136317.1-201ENST00000612653 226 ntBASIC0.61□□□□□ -2.31
HMGCS2P54868 Y_RNA.115-201ENST00000363272 98 ntBASIC0.6□□□□□ -2.31
HMGCS2P54868 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms