Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 Y_RNA.393-201ENST00000383936 102 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 SNORA20-201ENST00000384662 132 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 MIR624-201ENST00000385217 97 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 AC090844.1-201ENST00000422019 156 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 HMGN1P33-201ENST00000432945 451 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 RNU7-62P-201ENST00000458856 62 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 AC107027.2-201ENST00000512197 115 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 RNU6-1110P-201ENST00000516462 101 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 AC104465.1-201ENST00000611365 139 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 AC078938.1-201ENST00000620993 318 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 AC091932.4-201ENST00000623386 200 ntBASIC0.62□□□□□ -2.31
EFNA3P52797 RNU6-200P-201ENST00000364743 107 ntBASIC0.61□□□□□ -2.31
EFNA3P52797 RNU6-580P-201ENST00000365159 107 ntBASIC0.61□□□□□ -2.31
EFNA3P52797 Y_RNA.337-201ENST00000365312 102 ntBASIC0.61□□□□□ -2.31
EFNA3P52797 RNU6-597P-201ENST00000365620 102 ntBASIC0.61□□□□□ -2.31
EFNA3P52797 RNY1P4-201ENST00000384595 115 ntBASIC0.61□□□□□ -2.31
EFNA3P52797 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.61□□□□□ -2.31
EFNA3P52797 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
EFNA3P52797 AP002392.1-201ENST00000537692 208 ntBASIC0.61□□□□□ -2.31
EFNA3P52797 MIR376A2-201ENST00000636782 80 ntBASIC0.61□□□□□ -2.31
EFNA3P52797 RNU6-1190P-201ENST00000410811 104 ntBASIC0.6□□□□□ -2.31
EFNA3P52797 AC015818.7-201ENST00000428754 109 ntBASIC0.6□□□□□ -2.31
EFNA3P52797 AC087499.7-201ENST00000441958 109 ntBASIC0.6□□□□□ -2.31
EFNA3P52797 snoU13.21-201ENST00000459368 105 ntBASIC0.6□□□□□ -2.31
EFNA3P52797 RNU6-1219P-201ENST00000516143 112 ntBASIC0.6□□□□□ -2.31
EFNA3P52797 RN7SL793P-201ENST00000583259 296 ntBASIC0.6□□□□□ -2.31
EFNA3P52797 MIR6779-201ENST00000617283 64 ntBASIC0.6□□□□□ -2.31
EFNA3P52797 MIR6513-201ENST00000621188 64 ntBASIC0.6□□□□□ -2.31
EFNA3P52797 MIR6717-201ENST00000622747 73 ntBASIC0.6□□□□□ -2.31
EFNA3P52797 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.59□□□□□ -2.31
EFNA3P52797 RNU6-934P-201ENST00000365154 107 ntBASIC0.59□□□□□ -2.31
EFNA3P52797 MIR588-201ENST00000384900 83 ntBASIC0.59□□□□□ -2.31
EFNA3P52797 MIR1827-201ENST00000408549 66 ntBASIC0.59□□□□□ -2.31
EFNA3P52797 RNU6-602P-201ENST00000411155 105 ntBASIC0.59□□□□□ -2.31
EFNA3P52797 AC244023.1-201ENST00000426884 112 ntBASIC0.59□□□□□ -2.31
EFNA3P52797 AC113410.1-201ENST00000505029 247 ntBASIC0.59□□□□□ -2.31
EFNA3P52797 Y_RNA.700-201ENST00000516806 100 ntBASIC0.59□□□□□ -2.31
EFNA3P52797 RNU6-1149P-201ENST00000516810 97 ntBASIC0.59□□□□□ -2.31
EFNA3P52797 AC022559.1-201ENST00000520905 205 ntBASIC0.59□□□□□ -2.31
EFNA3P52797 AC242498.1-201ENST00000604134 111 ntBASIC0.59□□□□□ -2.31
EFNA3P52797 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
EFNA3P52797 Y_RNA.29-201ENST00000362570 113 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 Y_RNA.257-201ENST00000364596 102 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 RNU6-1319P-201ENST00000390855 104 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 RNU6-747P-201ENST00000390928 104 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 RNU6-241P-201ENST00000391148 104 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 RNU6-177P-201ENST00000411257 104 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 MIR18B-201ENST00000454574 71 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 RNU6-893P-201ENST00000458841 100 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 RNU6-138P-201ENST00000515952 107 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 MIR4771-2-201ENST00000577758 74 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 AC011195.1-201ENST00000578177 177 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 MIR4771-1-201ENST00000582617 74 ntBASIC0.58□□□□□ -2.32
EFNA3P52797 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.58□□□□□ -2.32
EFNA3P52797 Y_RNA.205-201ENST00000364128 113 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 RNU6-818P-201ENST00000364837 108 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 RNU6-239P-201ENST00000390990 99 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 SNORD37.2-201ENST00000391075 66 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 SNORD83.1-201ENST00000411362 77 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 RPL39P25-201ENST00000449384 154 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 snoU13.2-201ENST00000459201 104 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 RNU7-45P-201ENST00000459460 63 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 Y_RNA.662-201ENST00000516028 97 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 RNU6-977P-201ENST00000516411 103 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 MIR6844-201ENST00000637122 62 ntBASIC0.57□□□□□ -2.32
EFNA3P52797 AC010332.2-201ENST00000613083 1904 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 Y_RNA.430-201ENST00000384081 110 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 RNU6-768P-201ENST00000384683 107 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 SNORD12C-201ENST00000386307 89 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 SNORD105-201ENST00000386910 85 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 SNORA26.6-201ENST00000391256 115 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 SNORA75.5-201ENST00000391291 81 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 MIR936-201ENST00000401264 98 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 RNU6-1165P-201ENST00000410119 107 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 RNA5SP237-201ENST00000410414 113 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 RNA5SP222-201ENST00000411039 105 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 AC098934.3-201ENST00000430450 190 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 RNU7-120P-201ENST00000459334 63 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 SNORA81.3-201ENST00000517283 198 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 MIR6740-201ENST00000618268 113 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 AC021613.1-201ENST00000623880 111 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
EFNA3P52797 MTND5P32-201ENST00000560711 1802 ntBASIC0.56□□□□□ -2.32
EFNA3P52797 RNU6-1336P-201ENST00000383886 109 ntBASIC0.55□□□□□ -2.32
EFNA3P52797 MIR520F-201ENST00000384824 87 ntBASIC0.55□□□□□ -2.32
EFNA3P52797 MTATP6P21-201ENST00000440681 189 ntBASIC0.55□□□□□ -2.32
EFNA3P52797 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.55□□□□□ -2.32
EFNA3P52797 COX6CP6-201ENST00000490840 228 ntBASIC0.55□□□□□ -2.32
EFNA3P52797 SCARNA15-202ENST00000516881 127 ntBASIC0.55□□□□□ -2.32
EFNA3P52797 MIR3646-201ENST00000578301 84 ntBASIC0.55□□□□□ -2.32
EFNA3P52797 SNORA22.1-201ENST00000362701 134 ntBASIC0.54□□□□□ -2.32
EFNA3P52797 Y_RNA.52-201ENST00000362760 96 ntBASIC0.54□□□□□ -2.32
EFNA3P52797 RNU4-84P-201ENST00000364200 139 ntBASIC0.54□□□□□ -2.32
EFNA3P52797 Y_RNA.240-201ENST00000364469 95 ntBASIC0.54□□□□□ -2.32
EFNA3P52797 RNU6-1318P-201ENST00000365389 103 ntBASIC0.54□□□□□ -2.32
EFNA3P52797 SNORD18B-201ENST00000365659 72 ntBASIC0.54□□□□□ -2.32
EFNA3P52797 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms