Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PSMC1P5-201ENST00000512850 177 ntBASIC0.95□□□□□ -2.26
NEK3P51956 AC104465.1-201ENST00000611365 139 ntBASIC0.95□□□□□ -2.26
NEK3P51956 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
NEK3P51956 RNU4-84P-201ENST00000364200 139 ntBASIC0.94□□□□□ -2.26
NEK3P51956 RNU6-818P-201ENST00000364837 108 ntBASIC0.94□□□□□ -2.26
NEK3P51956 RNU6-42P-201ENST00000384165 107 ntBASIC0.94□□□□□ -2.26
NEK3P51956 RNY1P6-201ENST00000384193 109 ntBASIC0.94□□□□□ -2.26
NEK3P51956 SNORD12C-201ENST00000386307 89 ntBASIC0.94□□□□□ -2.26
NEK3P51956 RNU6-1135P-201ENST00000411083 103 ntBASIC0.94□□□□□ -2.26
NEK3P51956 MTATP6P21-201ENST00000440681 189 ntBASIC0.94□□□□□ -2.26
NEK3P51956 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.94□□□□□ -2.26
NEK3P51956 RNU7-121P-201ENST00000516604 62 ntBASIC0.94□□□□□ -2.26
NEK3P51956 RMST_2.1-201ENST00000617263 136 ntBASIC0.94□□□□□ -2.26
NEK3P51956 MIR6844-201ENST00000637122 62 ntBASIC0.94□□□□□ -2.26
NEK3P51956 AC010332.2-201ENST00000613083 1904 ntBASIC0.93□□□□□ -2.26
NEK3P51956 SNORA22.1-201ENST00000362701 134 ntBASIC0.93□□□□□ -2.26
NEK3P51956 Y_RNA.52-201ENST00000362760 96 ntBASIC0.93□□□□□ -2.26
NEK3P51956 RNU6-1335P-201ENST00000365426 107 ntBASIC0.93□□□□□ -2.26
NEK3P51956 snoU13.21-201ENST00000459368 105 ntBASIC0.93□□□□□ -2.26
NEK3P51956 RNU7-45P-201ENST00000459460 63 ntBASIC0.93□□□□□ -2.26
NEK3P51956 RPS29P1-201ENST00000465274 159 ntBASIC0.93□□□□□ -2.26
NEK3P51956 MIR4676-201ENST00000583078 72 ntBASIC0.93□□□□□ -2.26
NEK3P51956 AC011603.4-201ENST00000611325 277 ntBASIC0.93□□□□□ -2.26
NEK3P51956 RNA5SP237-201ENST00000410414 113 ntBASIC0.92□□□□□ -2.26
NEK3P51956 Y_RNA.662-201ENST00000516028 97 ntBASIC0.92□□□□□ -2.26
NEK3P51956 SNORA81.3-201ENST00000517283 198 ntBASIC0.92□□□□□ -2.26
NEK3P51956 AC022559.1-201ENST00000520905 205 ntBASIC0.92□□□□□ -2.26
NEK3P51956 MIR4804-201ENST00000581683 73 ntBASIC0.92□□□□□ -2.26
NEK3P51956 SNORA4-201ENST00000584302 138 ntBASIC0.92□□□□□ -2.26
NEK3P51956 HSBP1P2-201ENST00000299671 229 ntBASIC0.91□□□□□ -2.26
NEK3P51956 MIR373-201ENST00000362273 69 ntBASIC0.91□□□□□ -2.26
NEK3P51956 MIR30D-201ENST00000362283 70 ntBASIC0.91□□□□□ -2.26
NEK3P51956 Y_RNA.118-201ENST00000363300 101 ntBASIC0.91□□□□□ -2.26
NEK3P51956 Y_RNA.441-201ENST00000384123 112 ntBASIC0.91□□□□□ -2.26
NEK3P51956 MIR520F-201ENST00000384824 87 ntBASIC0.91□□□□□ -2.26
NEK3P51956 RNU1-119P-201ENST00000391122 165 ntBASIC0.91□□□□□ -2.26
NEK3P51956 MIR938-201ENST00000401216 83 ntBASIC0.91□□□□□ -2.26
NEK3P51956 MIR1257-201ENST00000408490 117 ntBASIC0.91□□□□□ -2.26
NEK3P51956 DNAJC19P2-201ENST00000593340 302 ntBASIC0.91□□□□□ -2.26
NEK3P51956 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.91□□□□□ -2.26
NEK3P51956 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.26
NEK3P51956 RNU4-45P-201ENST00000365469 141 ntBASIC0.9□□□□□ -2.27
NEK3P51956 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.9□□□□□ -2.27
NEK3P51956 RNA5SP236-201ENST00000516169 116 ntBASIC0.9□□□□□ -2.27
NEK3P51956 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
NEK3P51956 MIR151B-201ENST00000584249 96 ntBASIC0.9□□□□□ -2.27
NEK3P51956 AL662814.1-201ENST00000617364 121 ntBASIC0.9□□□□□ -2.27
NEK3P51956 AC023934.1-201ENST00000574529 2389 ntBASIC0.89□□□□□ -2.27
NEK3P51956 MIR125B2-201ENST00000385128 89 ntBASIC0.89□□□□□ -2.27
NEK3P51956 RNU7-185P-201ENST00000459215 60 ntBASIC0.89□□□□□ -2.27
NEK3P51956 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.89□□□□□ -2.27
NEK3P51956 AC020891.4-201ENST00000605745 93 ntBASIC0.89□□□□□ -2.27
NEK3P51956 uc_338.6-201ENST00000613544 171 ntBASIC0.89□□□□□ -2.27
NEK3P51956 MIR6788-201ENST00000618842 66 ntBASIC0.89□□□□□ -2.27
NEK3P51956 MIR6734-201ENST00000621166 68 ntBASIC0.89□□□□□ -2.27
NEK3P51956 RNU6-1082P-201ENST00000364574 107 ntBASIC0.88□□□□□ -2.27
NEK3P51956 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.88□□□□□ -2.27
NEK3P51956 RNU5E-9P-201ENST00000411164 104 ntBASIC0.88□□□□□ -2.27
NEK3P51956 AC244098.3-201ENST00000424803 96 ntBASIC0.88□□□□□ -2.27
NEK3P51956 RNU7-56P-201ENST00000458744 62 ntBASIC0.88□□□□□ -2.27
NEK3P51956 RNU6-349P-201ENST00000362402 107 ntBASIC0.87□□□□□ -2.27
NEK3P51956 MIR573-201ENST00000384964 99 ntBASIC0.87□□□□□ -2.27
NEK3P51956 MIR605-201ENST00000385078 83 ntBASIC0.87□□□□□ -2.27
NEK3P51956 MIR520H-201ENST00000385126 88 ntBASIC0.87□□□□□ -2.27
NEK3P51956 RNU6-1223P-201ENST00000517124 104 ntBASIC0.87□□□□□ -2.27
NEK3P51956 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
NEK3P51956 AC011195.1-201ENST00000578177 177 ntBASIC0.87□□□□□ -2.27
NEK3P51956 AC004792.1-201ENST00000614523 137 ntBASIC0.87□□□□□ -2.27
NEK3P51956 RNU6-682P-201ENST00000363843 106 ntBASIC0.86□□□□□ -2.27
NEK3P51956 MIR548J-201ENST00000408833 112 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-447P-201ENST00000410293 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-1118P-201ENST00000410382 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-1076P-201ENST00000410397 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-355P-201ENST00000410427 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-791P-201ENST00000410467 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-705P-201ENST00000410601 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-1100P-201ENST00000410691 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-860P-201ENST00000410860 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-1217P-201ENST00000411276 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-785P-201ENST00000411324 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RPL39P25-201ENST00000449384 154 ntBASIC0.86□□□□□ -2.27
NEK3P51956 COX6CP6-201ENST00000490840 228 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-861P-201ENST00000516745 106 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-182P-201ENST00000516970 105 ntBASIC0.86□□□□□ -2.27
NEK3P51956 SNORD92-201ENST00000585078 85 ntBASIC0.86□□□□□ -2.27
NEK3P51956 FAM71BP1-201ENST00000604431 523 ntBASIC0.86□□□□□ -2.27
NEK3P51956 U6.90-201ENST00000614007 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 U6.70-201ENST00000620287 104 ntBASIC0.86□□□□□ -2.27
NEK3P51956 RNU6-1336P-201ENST00000383886 109 ntBASIC0.85□□□□□ -2.27
NEK3P51956 RNU6-364P-201ENST00000384387 107 ntBASIC0.85□□□□□ -2.27
NEK3P51956 Y_RNA.497-201ENST00000384447 98 ntBASIC0.85□□□□□ -2.27
NEK3P51956 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
NEK3P51956 SNORD37.2-201ENST00000391075 66 ntBASIC0.85□□□□□ -2.27
NEK3P51956 AL022718.1-201ENST00000412004 84 ntBASIC0.85□□□□□ -2.27
NEK3P51956 Y_RNA.757-201ENST00000578934 114 ntBASIC0.85□□□□□ -2.27
NEK3P51956 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.85□□□□□ -2.27
NEK3P51956 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
NEK3P51956 SNORD18B-201ENST00000365659 72 ntBASIC0.84□□□□□ -2.27
NEK3P51956 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
NEK3P51956 RNA5SP144-201ENST00000410846 116 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms