Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC062016.1-201ENST00000355719 319 ntBASIC2.11□□□□□ -2.07
GDNFP39905 MIR21-201ENST00000362134 72 ntBASIC2.11□□□□□ -2.07
GDNFP39905 Y_RNA.94-201ENST00000363068 106 ntBASIC2.11□□□□□ -2.07
GDNFP39905 RNA5SP456-201ENST00000364002 114 ntBASIC2.11□□□□□ -2.07
GDNFP39905 RNU6-203P-201ENST00000384038 104 ntBASIC2.11□□□□□ -2.07
GDNFP39905 SNORD38.2-201ENST00000384470 69 ntBASIC2.11□□□□□ -2.07
GDNFP39905 MIR889-201ENST00000401280 79 ntBASIC2.11□□□□□ -2.07
GDNFP39905 RNA5SP184-201ENST00000411071 108 ntBASIC2.11□□□□□ -2.07
GDNFP39905 SNORA31.17-201ENST00000516953 127 ntBASIC2.11□□□□□ -2.07
GDNFP39905 SNORD14A-201ENST00000606526 91 ntBASIC2.11□□□□□ -2.07
GDNFP39905 MIR6852-201ENST00000621699 66 ntBASIC2.11□□□□□ -2.07
GDNFP39905 MIR4251-201ENST00000635819 61 ntBASIC2.11□□□□□ -2.07
GDNFP39905 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
GDNFP39905 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
GDNFP39905 AC131280.1-202ENST00000624067 4211 ntBASIC2.1□□□□□ -2.07
GDNFP39905 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
GDNFP39905 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
GDNFP39905 MIRLET7G-201ENST00000362280 84 ntBASIC2.1□□□□□ -2.07
GDNFP39905 SNORA2B-201ENST00000384583 137 ntBASIC2.1□□□□□ -2.07
GDNFP39905 SNORD38B-201ENST00000384690 67 ntBASIC2.1□□□□□ -2.07
GDNFP39905 RNA5SP237-201ENST00000410414 113 ntBASIC2.1□□□□□ -2.07
GDNFP39905 RNA5SP270-201ENST00000411361 118 ntBASIC2.1□□□□□ -2.07
GDNFP39905 RNA5SP445-201ENST00000515889 115 ntBASIC2.1□□□□□ -2.07
GDNFP39905 RNU7-41P-201ENST00000515917 61 ntBASIC2.1□□□□□ -2.07
GDNFP39905 MIR6840-201ENST00000611937 71 ntBASIC2.1□□□□□ -2.07
GDNFP39905 U1.36-201ENST00000620684 176 ntBASIC2.1□□□□□ -2.07
GDNFP39905 AP001362.1-201ENST00000625165 124 ntBASIC2.1□□□□□ -2.07
GDNFP39905 SNORD38B-202ENST00000625943 69 ntBASIC2.1□□□□□ -2.07
GDNFP39905 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
GDNFP39905 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
GDNFP39905 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
GDNFP39905 MIR519C-201ENST00000385053 87 ntBASIC2.09□□□□□ -2.07
GDNFP39905 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.09□□□□□ -2.07
GDNFP39905 AC027119.1-201ENST00000440877 241 ntBASIC2.09□□□□□ -2.07
GDNFP39905 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.09□□□□□ -2.07
GDNFP39905 AC141846.1-201ENST00000568348 142 ntBASIC2.09□□□□□ -2.07
GDNFP39905 MIR3162-201ENST00000581818 82 ntBASIC2.09□□□□□ -2.07
GDNFP39905 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.09□□□□□ -2.07
GDNFP39905 RNU6-480P-201ENST00000384332 107 ntBASIC2.08□□□□□ -2.08
GDNFP39905 UBE2DNL-203ENST00000474922 222 ntBASIC2.08□□□□□ -2.08
GDNFP39905 AC093729.1-201ENST00000513074 128 ntBASIC2.08□□□□□ -2.08
GDNFP39905 RNA5SP320-201ENST00000516263 124 ntBASIC2.08□□□□□ -2.08
GDNFP39905 DEFB122-202ENST00000569013 197 ntBASIC2.08□□□□□ -2.08
GDNFP39905 MIR3935-201ENST00000583472 104 ntBASIC2.08□□□□□ -2.08
GDNFP39905 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.08□□□□□ -2.08
GDNFP39905 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.08□□□□□ -2.08
GDNFP39905 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
GDNFP39905 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
GDNFP39905 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
GDNFP39905 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
GDNFP39905 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
GDNFP39905 RNU6-360P-201ENST00000390944 104 ntBASIC2.07□□□□□ -2.08
GDNFP39905 AC133485.1-201ENST00000567176 124 ntBASIC2.07□□□□□ -2.08
GDNFP39905 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.07□□□□□ -2.08
GDNFP39905 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
GDNFP39905 RNU6-1123P-201ENST00000362347 106 ntBASIC2.06□□□□□ -2.08
GDNFP39905 Y_RNA.168-201ENST00000363740 102 ntBASIC2.06□□□□□ -2.08
GDNFP39905 SNORD114-30-201ENST00000364448 72 ntBASIC2.06□□□□□ -2.08
GDNFP39905 MIR196B-201ENST00000384852 84 ntBASIC2.06□□□□□ -2.08
GDNFP39905 RNA5SP450-201ENST00000411206 102 ntBASIC2.06□□□□□ -2.08
GDNFP39905 AC009474.2-201ENST00000451383 136 ntBASIC2.06□□□□□ -2.08
GDNFP39905 MIR4712-201ENST00000583750 82 ntBASIC2.06□□□□□ -2.08
GDNFP39905 AC067747.1-201ENST00000608026 250 ntBASIC2.06□□□□□ -2.08
GDNFP39905 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.06□□□□□ -2.08
GDNFP39905 RNU6-519P-201ENST00000410590 108 ntBASIC2.05□□□□□ -2.08
GDNFP39905 AC073261.1-201ENST00000429409 121 ntBASIC2.05□□□□□ -2.08
GDNFP39905 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.05□□□□□ -2.08
GDNFP39905 RNU7-153P-201ENST00000516455 62 ntBASIC2.05□□□□□ -2.08
GDNFP39905 AL662814.1-201ENST00000617364 121 ntBASIC2.05□□□□□ -2.08
GDNFP39905 SNORD115-37-201ENST00000363768 82 ntBASIC2.04□□□□□ -2.08
GDNFP39905 SNORA3A-201ENST00000364113 130 ntBASIC2.04□□□□□ -2.08
GDNFP39905 MIR27B-201ENST00000385129 97 ntBASIC2.04□□□□□ -2.08
GDNFP39905 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
GDNFP39905 SNORA11.2-201ENST00000408318 127 ntBASIC2.04□□□□□ -2.08
GDNFP39905 AC004965.1-201ENST00000413033 213 ntBASIC2.04□□□□□ -2.08
GDNFP39905 AC244023.1-201ENST00000426884 112 ntBASIC2.04□□□□□ -2.08
GDNFP39905 RPS29P11-201ENST00000496507 171 ntBASIC2.04□□□□□ -2.08
GDNFP39905 RNU6-322P-201ENST00000516010 103 ntBASIC2.04□□□□□ -2.08
GDNFP39905 RNA5SP148-201ENST00000516527 94 ntBASIC2.04□□□□□ -2.08
GDNFP39905 AC140658.3-201ENST00000567603 271 ntBASIC2.04□□□□□ -2.08
GDNFP39905 AC090897.1-201ENST00000580909 226 ntBASIC2.04□□□□□ -2.08
GDNFP39905 MIR4672-201ENST00000583126 81 ntBASIC2.04□□□□□ -2.08
GDNFP39905 AC242498.1-201ENST00000604134 111 ntBASIC2.04□□□□□ -2.08
GDNFP39905 MIR6817-201ENST00000615588 66 ntBASIC2.04□□□□□ -2.08
GDNFP39905 U4.3-201ENST00000621047 82 ntBASIC2.04□□□□□ -2.08
GDNFP39905 ZNF658B-202ENST00000615961 3375 ntBASIC2.04□□□□□ -2.08
GDNFP39905 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
GDNFP39905 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
GDNFP39905 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.03□□□□□ -2.08
GDNFP39905 HSBP1P2-201ENST00000299671 229 ntBASIC2.03□□□□□ -2.08
GDNFP39905 RNA5SP68-201ENST00000363885 119 ntBASIC2.03□□□□□ -2.08
GDNFP39905 MIR194-1-201ENST00000384892 85 ntBASIC2.03□□□□□ -2.08
GDNFP39905 MIR653-201ENST00000385279 96 ntBASIC2.03□□□□□ -2.08
GDNFP39905 HMGN2P38-201ENST00000423806 265 ntBASIC2.03□□□□□ -2.08
GDNFP39905 AC087499.7-201ENST00000441958 109 ntBASIC2.03□□□□□ -2.08
GDNFP39905 AC104435.1-201ENST00000483483 166 ntBASIC2.03□□□□□ -2.08
GDNFP39905 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
GDNFP39905 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.03□□□□□ -2.08
GDNFP39905 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
GDNFP39905 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms