Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RNU6-1144P-201ENST00000384247 104 ntBASIC1.23□□□□□ -2.21
KRT9P35527 MIR548A3-201ENST00000385297 97 ntBASIC1.23□□□□□ -2.21
KRT9P35527 SNORA75.2-201ENST00000391138 150 ntBASIC1.23□□□□□ -2.21
KRT9P35527 SNORA75.3-201ENST00000391231 150 ntBASIC1.23□□□□□ -2.21
KRT9P35527 MIR1263-201ENST00000408324 86 ntBASIC1.23□□□□□ -2.21
KRT9P35527 AC002429.1-201ENST00000437672 148 ntBASIC1.23□□□□□ -2.21
KRT9P35527 RNU7-80P-201ENST00000459562 61 ntBASIC1.23□□□□□ -2.21
KRT9P35527 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
KRT9P35527 RNU6-781P-201ENST00000516377 101 ntBASIC1.23□□□□□ -2.21
KRT9P35527 SNORD36C-201ENST00000516733 66 ntBASIC1.23□□□□□ -2.21
KRT9P35527 AP003484.1-201ENST00000530974 250 ntBASIC1.23□□□□□ -2.21
KRT9P35527 AC108081.1-201ENST00000604358 221 ntBASIC1.23□□□□□ -2.21
KRT9P35527 RMST_2.1-201ENST00000617263 136 ntBASIC1.23□□□□□ -2.21
KRT9P35527 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.22□□□□□ -2.21
KRT9P35527 RNU1-133P-201ENST00000364867 167 ntBASIC1.22□□□□□ -2.21
KRT9P35527 RNU6-392P-201ENST00000364926 101 ntBASIC1.22□□□□□ -2.21
KRT9P35527 Y_RNA.440-201ENST00000384120 114 ntBASIC1.22□□□□□ -2.21
KRT9P35527 Y_RNA.454-201ENST00000384224 113 ntBASIC1.22□□□□□ -2.21
KRT9P35527 Y_RNA.630-201ENST00000411370 108 ntBASIC1.22□□□□□ -2.21
KRT9P35527 MRPL35P3-201ENST00000421557 364 ntBASIC1.22□□□□□ -2.21
KRT9P35527 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.22□□□□□ -2.21
KRT9P35527 AC107297.1-201ENST00000459991 176 ntBASIC1.22□□□□□ -2.21
KRT9P35527 RNU6-830P-201ENST00000516353 107 ntBASIC1.22□□□□□ -2.21
KRT9P35527 AL670379.3-201ENST00000605040 251 ntBASIC1.22□□□□□ -2.21
KRT9P35527 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
KRT9P35527 AL137067.1-201ENST00000615933 120 ntBASIC1.22□□□□□ -2.21
KRT9P35527 MIR6129-201ENST00000616087 109 ntBASIC1.22□□□□□ -2.21
KRT9P35527 MIR376A2-201ENST00000636782 80 ntBASIC1.22□□□□□ -2.21
KRT9P35527 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
KRT9P35527 RNA5SP264-201ENST00000363115 107 ntBASIC1.21□□□□□ -2.22
KRT9P35527 Y_RNA.241-201ENST00000364470 117 ntBASIC1.21□□□□□ -2.22
KRT9P35527 RNU6-690P-201ENST00000365242 106 ntBASIC1.21□□□□□ -2.22
KRT9P35527 Y_RNA.528-201ENST00000384575 108 ntBASIC1.21□□□□□ -2.22
KRT9P35527 RNA5SP136-201ENST00000410906 107 ntBASIC1.21□□□□□ -2.22
KRT9P35527 RNU6-938P-201ENST00000411285 103 ntBASIC1.21□□□□□ -2.22
KRT9P35527 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.21□□□□□ -2.22
KRT9P35527 Y_RNA.649-201ENST00000459077 103 ntBASIC1.21□□□□□ -2.22
KRT9P35527 RNU7-21P-201ENST00000459430 62 ntBASIC1.21□□□□□ -2.22
KRT9P35527 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.21□□□□□ -2.22
KRT9P35527 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.21□□□□□ -2.22
KRT9P35527 MTND5P18-201ENST00000445624 1801 ntBASIC1.21□□□□□ -2.22
KRT9P35527 AC008163.1-202ENST00000636004 2889 ntBASIC1.21□□□□□ -2.22
KRT9P35527 MIR302B-201ENST00000362188 73 ntBASIC1.2□□□□□ -2.22
KRT9P35527 MIR342-201ENST00000362212 99 ntBASIC1.2□□□□□ -2.22
KRT9P35527 RNA5SP325-201ENST00000363756 130 ntBASIC1.2□□□□□ -2.22
KRT9P35527 SNORA1.2-201ENST00000365189 134 ntBASIC1.2□□□□□ -2.22
KRT9P35527 RNU6-42P-201ENST00000384165 107 ntBASIC1.2□□□□□ -2.22
KRT9P35527 SNORA27-201ENST00000384323 126 ntBASIC1.2□□□□□ -2.22
KRT9P35527 SNORD116-21-201ENST00000384507 92 ntBASIC1.2□□□□□ -2.22
KRT9P35527 RNU6-429P-201ENST00000384582 108 ntBASIC1.2□□□□□ -2.22
KRT9P35527 MIR548A1-201ENST00000385041 97 ntBASIC1.2□□□□□ -2.22
KRT9P35527 MIR759-201ENST00000390224 91 ntBASIC1.2□□□□□ -2.22
KRT9P35527 RPS29P28-201ENST00000446439 141 ntBASIC1.2□□□□□ -2.22
KRT9P35527 RNU6-240P-201ENST00000516098 97 ntBASIC1.2□□□□□ -2.22
KRT9P35527 SNORD33.1-201ENST00000516213 88 ntBASIC1.2□□□□□ -2.22
KRT9P35527 AL596211.1-201ENST00000569873 2277 ntBASIC1.2□□□□□ -2.22
KRT9P35527 MIR103A2-201ENST00000362154 78 ntBASIC1.19□□□□□ -2.22
KRT9P35527 RNA5SP48-201ENST00000363969 126 ntBASIC1.19□□□□□ -2.22
KRT9P35527 Y_RNA.366-201ENST00000365540 102 ntBASIC1.19□□□□□ -2.22
KRT9P35527 SNORA22-201ENST00000383907 134 ntBASIC1.19□□□□□ -2.22
KRT9P35527 RNY1P6-201ENST00000384193 109 ntBASIC1.19□□□□□ -2.22
KRT9P35527 MIR570-201ENST00000384917 97 ntBASIC1.19□□□□□ -2.22
KRT9P35527 MIRLET7F2-201ENST00000385277 83 ntBASIC1.19□□□□□ -2.22
KRT9P35527 U8.17-201ENST00000391292 132 ntBASIC1.19□□□□□ -2.22
KRT9P35527 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.19□□□□□ -2.22
KRT9P35527 RPS29P1-201ENST00000465274 159 ntBASIC1.19□□□□□ -2.22
KRT9P35527 Y_RNA.709-201ENST00000516952 92 ntBASIC1.19□□□□□ -2.22
KRT9P35527 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.19□□□□□ -2.22
KRT9P35527 IGKV1-22-201ENST00000524313 326 ntBASIC1.19□□□□□ -2.22
KRT9P35527 AP003716.2-201ENST00000528260 108 ntBASIC1.19□□□□□ -2.22
KRT9P35527 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.19□□□□□ -2.22
KRT9P35527 SNORA25.3-201ENST00000363205 127 ntBASIC1.18□□□□□ -2.22
KRT9P35527 RNU6-1067P-201ENST00000384752 107 ntBASIC1.18□□□□□ -2.22
KRT9P35527 RNY4P18-201ENST00000391107 89 ntBASIC1.18□□□□□ -2.22
KRT9P35527 SNORD124-201ENST00000459577 104 ntBASIC1.18□□□□□ -2.22
KRT9P35527 PDCD5P2-201ENST00000507570 312 ntBASIC1.18□□□□□ -2.22
KRT9P35527 RNU7-181P-201ENST00000517234 74 ntBASIC1.18□□□□□ -2.22
KRT9P35527 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.18□□□□□ -2.22
KRT9P35527 AC091932.4-201ENST00000623386 200 ntBASIC1.18□□□□□ -2.22
KRT9P35527 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.18□□□□□ -2.22
KRT9P35527 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
KRT9P35527 RNU6-349P-201ENST00000362402 107 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-34-201ENST00000362441 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-12-201ENST00000362583 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-29-201ENST00000362834 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-9-201ENST00000362912 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-21-201ENST00000362963 81 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-14-201ENST00000363090 81 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-13-201ENST00000363358 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-41-201ENST00000363608 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-11-201ENST00000363616 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-5-201ENST00000363633 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-39-201ENST00000363694 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-4-201ENST00000363810 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-16-201ENST00000363887 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-6-201ENST00000363942 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-42-201ENST00000364273 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-15-201ENST00000364809 81 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-1-201ENST00000364961 82 ntBASIC1.17□□□□□ -2.22
KRT9P35527 SNORD115-26-201ENST00000365067 82 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms