Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.68□□□□□ -2.68
TPM3P06753 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.68□□□□□ -2.68
TPM3P06753 RNU6-901P-201ENST00000384593 106 ntBASIC-1.68□□□□□ -2.68
TPM3P06753 RNU6-310P-201ENST00000384655 107 ntBASIC-1.68□□□□□ -2.68
TPM3P06753 MIR181A1-201ENST00000385026 110 ntBASIC-1.68□□□□□ -2.68
TPM3P06753 RNU2-16P-201ENST00000410712 136 ntBASIC-1.68□□□□□ -2.68
TPM3P06753 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.68□□□□□ -2.68
TPM3P06753 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.68□□□□□ -2.68
TPM3P06753 MIR4280-201ENST00000582178 76 ntBASIC-1.68□□□□□ -2.68
TPM3P06753 MIR3974-201ENST00000637126 96 ntBASIC-1.68□□□□□ -2.68
TPM3P06753 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 RNU6-890P-201ENST00000384121 107 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 SNORA53-201ENST00000391141 249 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 RNU4-63P-201ENST00000411313 118 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 AC099799.1-201ENST00000439809 192 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 AC040926.1-201ENST00000530195 238 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 AC024909.2-201ENST00000553035 286 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 MIR5688-201ENST00000580619 83 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 AC108676.2-201ENST00000605225 163 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 AL121655.1-201ENST00000605811 308 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 AC078883.4-201ENST00000623218 367 ntBASIC-1.69□□□□□ -2.68
TPM3P06753 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.7□□□□□ -2.68
TPM3P06753 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.7□□□□□ -2.68
TPM3P06753 RNU4-36P-201ENST00000364294 144 ntBASIC-1.7□□□□□ -2.68
TPM3P06753 AC093423.1-201ENST00000440817 142 ntBASIC-1.7□□□□□ -2.68
TPM3P06753 MRPS35P2-201ENST00000508242 191 ntBASIC-1.7□□□□□ -2.68
TPM3P06753 RNU6-758P-201ENST00000516292 89 ntBASIC-1.7□□□□□ -2.68
TPM3P06753 RNU7-70P-201ENST00000516941 66 ntBASIC-1.7□□□□□ -2.68
TPM3P06753 MIR548AE1-201ENST00000583292 70 ntBASIC-1.7□□□□□ -2.68
TPM3P06753 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.7□□□□□ -2.68
TPM3P06753 MIR7111-201ENST00000619751 72 ntBASIC-1.7□□□□□ -2.68
TPM3P06753 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.71□□□□□ -2.68
TPM3P06753 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.71□□□□□ -2.68
TPM3P06753 RNU6-154P-201ENST00000384306 106 ntBASIC-1.71□□□□□ -2.68
TPM3P06753 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.71□□□□□ -2.68
TPM3P06753 MIR196A1-201ENST00000388006 70 ntBASIC-1.71□□□□□ -2.68
TPM3P06753 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.71□□□□□ -2.68
TPM3P06753 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.71□□□□□ -2.68
TPM3P06753 AC007485.1-201ENST00000616755 206 ntBASIC-1.71□□□□□ -2.68
TPM3P06753 MIR6851-201ENST00000617060 67 ntBASIC-1.71□□□□□ -2.68
TPM3P06753 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.72□□□□□ -2.68
TPM3P06753 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.72□□□□□ -2.68
TPM3P06753 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.72□□□□□ -2.68
TPM3P06753 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.72□□□□□ -2.68
TPM3P06753 SNORD67.1-201ENST00000516618 108 ntBASIC-1.72□□□□□ -2.68
TPM3P06753 AP001328.1-201ENST00000528550 176 ntBASIC-1.72□□□□□ -2.68
TPM3P06753 MIR3129-201ENST00000581095 76 ntBASIC-1.72□□□□□ -2.68
TPM3P06753 SNORD114-10-201ENST00000363409 72 ntBASIC-1.73□□□□□ -2.69
TPM3P06753 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.73□□□□□ -2.69
TPM3P06753 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.73□□□□□ -2.69
TPM3P06753 RNU4-16P-201ENST00000364737 141 ntBASIC-1.73□□□□□ -2.69
TPM3P06753 MIR519A1-201ENST00000385257 85 ntBASIC-1.73□□□□□ -2.69
TPM3P06753 RNU4-14P-201ENST00000410858 122 ntBASIC-1.73□□□□□ -2.69
TPM3P06753 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.74□□□□□ -2.69
TPM3P06753 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.74□□□□□ -2.69
TPM3P06753 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.74□□□□□ -2.69
TPM3P06753 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.74□□□□□ -2.69
TPM3P06753 MIR519E-201ENST00000385075 84 ntBASIC-1.74□□□□□ -2.69
TPM3P06753 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.74□□□□□ -2.69
TPM3P06753 PMCHL1-202ENST00000423102 261 ntBASIC-1.74□□□□□ -2.69
TPM3P06753 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.74□□□□□ -2.69
TPM3P06753 AP000676.1-201ENST00000533307 52 ntBASIC-1.74□□□□□ -2.69
TPM3P06753 AC133104.2-201ENST00000615272 193 ntBASIC-1.74□□□□□ -2.69
TPM3P06753 AC048344.4-201ENST00000619744 527 ntBASIC-1.74□□□□□ -2.69
TPM3P06753 RNU6-502P-201ENST00000362419 108 ntBASIC-1.75□□□□□ -2.69
TPM3P06753 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.75□□□□□ -2.69
TPM3P06753 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.75□□□□□ -2.69
TPM3P06753 SNORD38.3-201ENST00000516599 73 ntBASIC-1.75□□□□□ -2.69
TPM3P06753 AL359881.1-201ENST00000602916 267 ntBASIC-1.75□□□□□ -2.69
TPM3P06753 Z95118.1-201ENST00000421372 247 ntBASIC-1.76□□□□□ -2.69
TPM3P06753 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.76□□□□□ -2.69
TPM3P06753 MIR4272-201ENST00000635924 64 ntBASIC-1.76□□□□□ -2.69
TPM3P06753 SNORD95.1-201ENST00000364099 68 ntBASIC-1.77□□□□□ -2.69
TPM3P06753 SNORA32-201ENST00000384072 121 ntBASIC-1.77□□□□□ -2.69
TPM3P06753 MIR617-201ENST00000385030 97 ntBASIC-1.77□□□□□ -2.69
TPM3P06753 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.77□□□□□ -2.69
TPM3P06753 RNU6-507P-201ENST00000516045 100 ntBASIC-1.77□□□□□ -2.69
TPM3P06753 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.77□□□□□ -2.69
TPM3P06753 SNORA27.4-201ENST00000516650 95 ntBASIC-1.77□□□□□ -2.69
TPM3P06753 MIR548AG2-201ENST00000581228 64 ntBASIC-1.77□□□□□ -2.69
TPM3P06753 MIR5690-201ENST00000583739 73 ntBASIC-1.77□□□□□ -2.69
TPM3P06753 AC006006.1-201ENST00000603082 144 ntBASIC-1.77□□□□□ -2.69
TPM3P06753 RNU6-86P-201ENST00000606534 107 ntBASIC-1.77□□□□□ -2.69
TPM3P06753 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.78□□□□□ -2.69
TPM3P06753 RNU4-10P-201ENST00000364383 140 ntBASIC-1.78□□□□□ -2.69
TPM3P06753 RNU6-370P-201ENST00000411008 104 ntBASIC-1.78□□□□□ -2.69
TPM3P06753 MIR4460-201ENST00000577862 86 ntBASIC-1.78□□□□□ -2.69
TPM3P06753 MIR4760-201ENST00000585040 80 ntBASIC-1.78□□□□□ -2.69
TPM3P06753 MIR20A-201ENST00000362279 71 ntBASIC-1.79□□□□□ -2.7
TPM3P06753 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.79□□□□□ -2.7
TPM3P06753 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.79□□□□□ -2.7
TPM3P06753 MIR559-201ENST00000385188 96 ntBASIC-1.79□□□□□ -2.7
TPM3P06753 SNORD83B-201ENST00000386745 93 ntBASIC-1.79□□□□□ -2.7
TPM3P06753 MIR548I2-201ENST00000408348 149 ntBASIC-1.79□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms