Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 RNU6-49P-201ENST00000384256 107 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 Y_RNA.470-201ENST00000384307 117 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 Y_RNA.544-201ENST00000384650 113 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 RNU6-1319P-201ENST00000390855 104 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 RNU6-747P-201ENST00000390928 104 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 RNU6-241P-201ENST00000391148 104 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 SNORA26.6-201ENST00000391256 115 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 RNU6-177P-201ENST00000411257 104 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 RNU7-113P-201ENST00000459273 62 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 RNU6-904P-201ENST00000516206 101 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 FAM106DP-201ENST00000586416 501 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
ITGB1P05556 AC243994.1-201ENST00000618627 109 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.84□□□□□ -2.11
ITGB1P05556 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.83□□□□□ -2.12
ITGB1P05556 SNORA22.1-201ENST00000362701 134 ntBASIC1.83□□□□□ -2.12
ITGB1P05556 SNORA24-201ENST00000384096 131 ntBASIC1.83□□□□□ -2.12
ITGB1P05556 SNORA70.7-201ENST00000384159 133 ntBASIC1.83□□□□□ -2.12
ITGB1P05556 Y_RNA.508-201ENST00000384502 114 ntBASIC1.83□□□□□ -2.12
ITGB1P05556 RNU6-917P-201ENST00000516294 104 ntBASIC1.83□□□□□ -2.12
ITGB1P05556 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.83□□□□□ -2.12
ITGB1P05556 SNORA25.9-201ENST00000365087 128 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 Y_RNA.355-201ENST00000365462 98 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 MIR1912-201ENST00000410389 80 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 HMGN1P33-201ENST00000432945 451 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 MIR1270-201ENST00000459320 83 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 SNORA72.7-201ENST00000516349 94 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 RNU7-53P-201ENST00000516705 60 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 MIR548AE2-201ENST00000583456 67 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 AL512598.1-201ENST00000610158 273 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 MIR6841-201ENST00000637129 72 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 WWP1P1-201ENST00000466609 2769 ntBASIC1.82□□□□□ -2.12
ITGB1P05556 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ITGB1P05556 Y_RNA.78-201ENST00000362970 110 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 SNORD115-19-201ENST00000363098 82 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 SNORD115-18-201ENST00000363293 82 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 Y_RNA.118-201ENST00000363300 101 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 SNORD115-17-201ENST00000364612 82 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 RNU6-970P-201ENST00000516312 107 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 RNA5SP33-201ENST00000516687 98 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 MIR3152-201ENST00000579801 74 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 BX248123.2-201ENST00000606318 124 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 AL020996.3-201ENST00000606617 222 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ITGB1P05556 MIR6717-201ENST00000622747 73 ntBASIC1.81□□□□□ -2.12
ITGB1P05556 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
ITGB1P05556 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
ITGB1P05556 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ITGB1P05556 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.8□□□□□ -2.12
ITGB1P05556 AP000648.3-201ENST00000623539 4507 ntBASIC1.8□□□□□ -2.12
ITGB1P05556 RNU6-294P-201ENST00000364999 102 ntBASIC1.8□□□□□ -2.12
ITGB1P05556 MIR605-201ENST00000385078 83 ntBASIC1.8□□□□□ -2.12
ITGB1P05556 MIR653-201ENST00000385279 96 ntBASIC1.8□□□□□ -2.12
ITGB1P05556 RNU4-69P-201ENST00000410677 143 ntBASIC1.8□□□□□ -2.12
ITGB1P05556 RPS3AP1-201ENST00000413190 320 ntBASIC1.8□□□□□ -2.12
ITGB1P05556 SNORA77B-201ENST00000578179 125 ntBASIC1.8□□□□□ -2.12
ITGB1P05556 AC103810.8-201ENST00000607347 118 ntBASIC1.8□□□□□ -2.12
ITGB1P05556 Y_RNA.818-201ENST00000618813 71 ntBASIC1.8□□□□□ -2.12
ITGB1P05556 RNY3P2-201ENST00000362918 102 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 Y_RNA.155-201ENST00000363632 101 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 SNORD73B-201ENST00000364394 72 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 RNU4-67P-201ENST00000364569 141 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 Y_RNA.507-201ENST00000384500 99 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 RNY1P7-201ENST00000384743 110 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 MIR513A1-201ENST00000385138 129 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 MTATP8P2-201ENST00000435212 202 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 RNU7-73P-201ENST00000458743 63 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 SNORA74.3-201ENST00000517108 154 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 DEFB131E-201ENST00000532329 154 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 AC015688.6-201ENST00000577737 104 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 MIR4285-201ENST00000581001 85 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 AL645939.4-201ENST00000604495 135 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.79□□□□□ -2.12
ITGB1P05556 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.79□□□□□ -2.12
ITGB1P05556 SNORD115-2-201ENST00000362842 82 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 RNU6-363P-201ENST00000362895 105 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 RNU6-1099P-201ENST00000363533 107 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 Y_RNA.299-201ENST00000364973 94 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 SNORD115-20-201ENST00000365099 82 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 SNORA32-201ENST00000384072 121 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 RNU6-616P-201ENST00000384353 107 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 Y_RNA.537-201ENST00000384626 109 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
ITGB1P05556 AL353813.1-201ENST00000440700 253 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 RNU6-893P-201ENST00000458841 100 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.78□□□□□ -2.12
ITGB1P05556 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
ITGB1P05556 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
ITGB1P05556 Y_RNA.360-201ENST00000365512 102 ntBASIC1.77□□□□□ -2.13
ITGB1P05556 Y_RNA.430-201ENST00000384081 110 ntBASIC1.77□□□□□ -2.13
ITGB1P05556 RNU6-409P-201ENST00000384114 104 ntBASIC1.77□□□□□ -2.13
ITGB1P05556 MIR577-201ENST00000385196 96 ntBASIC1.77□□□□□ -2.13
ITGB1P05556 RNA5SP261-201ENST00000410536 106 ntBASIC1.77□□□□□ -2.13
ITGB1P05556 SNORA7.5-201ENST00000410672 110 ntBASIC1.77□□□□□ -2.13
ITGB1P05556 RNU6-733P-201ENST00000410759 104 ntBASIC1.77□□□□□ -2.13
ITGB1P05556 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.77□□□□□ -2.13
ITGB1P05556 MIR8074-201ENST00000615081 81 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 394.2 ms