Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU7-62P-201ENST00000458856 62 ntBASIC0.83□□□□□ -2.28
VTNP04004 snoU13.21-201ENST00000459368 105 ntBASIC0.83□□□□□ -2.28
VTNP04004 SCARNA15-202ENST00000516881 127 ntBASIC0.83□□□□□ -2.28
VTNP04004 MIR3152-201ENST00000579801 74 ntBASIC0.83□□□□□ -2.28
VTNP04004 MIR3671-201ENST00000580455 88 ntBASIC0.83□□□□□ -2.28
VTNP04004 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
VTNP04004 Y_RNA.8-201ENST00000362353 102 ntBASIC0.82□□□□□ -2.28
VTNP04004 Y_RNA.150-201ENST00000363562 102 ntBASIC0.82□□□□□ -2.28
VTNP04004 Y_RNA.168-201ENST00000363740 102 ntBASIC0.82□□□□□ -2.28
VTNP04004 MIR588-201ENST00000384900 83 ntBASIC0.82□□□□□ -2.28
VTNP04004 SNORD12C-201ENST00000386307 89 ntBASIC0.82□□□□□ -2.28
VTNP04004 SNORA75.5-201ENST00000391291 81 ntBASIC0.82□□□□□ -2.28
VTNP04004 FABP5P4-201ENST00000437203 171 ntBASIC0.82□□□□□ -2.28
VTNP04004 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.82□□□□□ -2.28
VTNP04004 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
VTNP04004 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
VTNP04004 Y_RNA.52-201ENST00000362760 96 ntBASIC0.81□□□□□ -2.28
VTNP04004 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
VTNP04004 RNU6-934P-201ENST00000365154 107 ntBASIC0.81□□□□□ -2.28
VTNP04004 MIR508-201ENST00000384857 115 ntBASIC0.81□□□□□ -2.28
VTNP04004 MIR598-201ENST00000384868 97 ntBASIC0.81□□□□□ -2.28
VTNP04004 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
VTNP04004 MT-TN-201ENST00000387400 73 ntBASIC0.81□□□□□ -2.28
VTNP04004 AC015818.7-201ENST00000428754 109 ntBASIC0.81□□□□□ -2.28
VTNP04004 AC087499.7-201ENST00000441958 109 ntBASIC0.81□□□□□ -2.28
VTNP04004 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
VTNP04004 AC133485.1-201ENST00000567176 124 ntBASIC0.81□□□□□ -2.28
VTNP04004 AC138907.6-201ENST00000568401 126 ntBASIC0.81□□□□□ -2.28
VTNP04004 DNAJC19P2-201ENST00000593340 302 ntBASIC0.81□□□□□ -2.28
VTNP04004 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
VTNP04004 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
VTNP04004 MIR1-1-201ENST00000362147 71 ntBASIC0.8□□□□□ -2.28
VTNP04004 Y_RNA.272-201ENST00000364696 102 ntBASIC0.8□□□□□ -2.28
VTNP04004 RNU6-1319P-201ENST00000390855 104 ntBASIC0.8□□□□□ -2.28
VTNP04004 RNU6-747P-201ENST00000390928 104 ntBASIC0.8□□□□□ -2.28
VTNP04004 RNU6-241P-201ENST00000391148 104 ntBASIC0.8□□□□□ -2.28
VTNP04004 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.8□□□□□ -2.28
VTNP04004 RNU6-177P-201ENST00000411257 104 ntBASIC0.8□□□□□ -2.28
VTNP04004 AC108059.2-201ENST00000434626 151 ntBASIC0.8□□□□□ -2.28
VTNP04004 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
VTNP04004 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
VTNP04004 AC021613.1-201ENST00000623880 111 ntBASIC0.8□□□□□ -2.28
VTNP04004 AC010332.2-201ENST00000613083 1904 ntBASIC0.79□□□□□ -2.28
VTNP04004 RNU6-151P-201ENST00000364158 107 ntBASIC0.79□□□□□ -2.28
VTNP04004 SNORD18B-201ENST00000365659 72 ntBASIC0.79□□□□□ -2.28
VTNP04004 Y_RNA.540-201ENST00000384638 111 ntBASIC0.79□□□□□ -2.28
VTNP04004 SNORA26.6-201ENST00000391256 115 ntBASIC0.79□□□□□ -2.28
VTNP04004 RNU6-1135P-201ENST00000411083 103 ntBASIC0.79□□□□□ -2.28
VTNP04004 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.79□□□□□ -2.28
VTNP04004 AC113410.1-201ENST00000505029 247 ntBASIC0.79□□□□□ -2.28
VTNP04004 RNU5E-3P-201ENST00000515913 68 ntBASIC0.79□□□□□ -2.28
VTNP04004 RNA5SP255-201ENST00000516370 107 ntBASIC0.79□□□□□ -2.28
VTNP04004 RNU7-121P-201ENST00000516604 62 ntBASIC0.79□□□□□ -2.28
VTNP04004 RNU6-794P-201ENST00000517261 64 ntBASIC0.79□□□□□ -2.28
VTNP04004 MIR4771-2-201ENST00000577758 74 ntBASIC0.79□□□□□ -2.28
VTNP04004 MIR3646-201ENST00000578301 84 ntBASIC0.79□□□□□ -2.28
VTNP04004 MIR4771-1-201ENST00000582617 74 ntBASIC0.79□□□□□ -2.28
VTNP04004 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
VTNP04004 MIR6740-201ENST00000618268 113 ntBASIC0.79□□□□□ -2.28
VTNP04004 RNU4-11P-201ENST00000365287 132 ntBASIC0.78□□□□□ -2.28
VTNP04004 RNU6-449P-201ENST00000383914 107 ntBASIC0.78□□□□□ -2.28
VTNP04004 Y_RNA.441-201ENST00000384123 112 ntBASIC0.78□□□□□ -2.28
VTNP04004 Y_RNA.497-201ENST00000384447 98 ntBASIC0.78□□□□□ -2.28
VTNP04004 Y_RNA.584-201ENST00000391090 114 ntBASIC0.78□□□□□ -2.28
VTNP04004 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.78□□□□□ -2.28
VTNP04004 RNA5SP237-201ENST00000410414 113 ntBASIC0.78□□□□□ -2.28
VTNP04004 uc_338.6-201ENST00000613544 171 ntBASIC0.78□□□□□ -2.28
VTNP04004 AC023934.1-201ENST00000574529 2389 ntBASIC0.78□□□□□ -2.28
VTNP04004 MIR377-201ENST00000362145 69 ntBASIC0.77□□□□□ -2.29
VTNP04004 SNORA22.1-201ENST00000362701 134 ntBASIC0.77□□□□□ -2.29
VTNP04004 RNU6-580P-201ENST00000365159 107 ntBASIC0.77□□□□□ -2.29
VTNP04004 RNU6-1335P-201ENST00000365426 107 ntBASIC0.77□□□□□ -2.29
VTNP04004 RNU6-1130P-201ENST00000365434 107 ntBASIC0.77□□□□□ -2.29
VTNP04004 SNORD116-18-201ENST00000383961 92 ntBASIC0.77□□□□□ -2.29
VTNP04004 RNY1P6-201ENST00000384193 109 ntBASIC0.77□□□□□ -2.29
VTNP04004 RNU6-804P-201ENST00000384286 107 ntBASIC0.77□□□□□ -2.29
VTNP04004 RNU6-1165P-201ENST00000410119 107 ntBASIC0.77□□□□□ -2.29
VTNP04004 RNU2-64P-201ENST00000411315 191 ntBASIC0.77□□□□□ -2.29
VTNP04004 snoU13.2-201ENST00000459201 104 ntBASIC0.77□□□□□ -2.29
VTNP04004 U7.7-201ENST00000459276 60 ntBASIC0.77□□□□□ -2.29
VTNP04004 AC004812.1-201ENST00000540773 146 ntBASIC0.77□□□□□ -2.29
VTNP04004 AC112693.2-201ENST00000556538 232 ntBASIC0.77□□□□□ -2.29
VTNP04004 AL136317.1-201ENST00000612653 226 ntBASIC0.77□□□□□ -2.29
VTNP04004 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.77□□□□□ -2.29
VTNP04004 RNY1P11-201ENST00000363759 113 ntBASIC0.76□□□□□ -2.29
VTNP04004 RNU6-690P-201ENST00000365242 106 ntBASIC0.76□□□□□ -2.29
VTNP04004 MIR605-201ENST00000385078 83 ntBASIC0.76□□□□□ -2.29
VTNP04004 RPS26P5-201ENST00000418544 335 ntBASIC0.76□□□□□ -2.29
VTNP04004 MTATP6P21-201ENST00000440681 189 ntBASIC0.76□□□□□ -2.29
VTNP04004 RPL39P25-201ENST00000449384 154 ntBASIC0.76□□□□□ -2.29
VTNP04004 RNU6-977P-201ENST00000516411 103 ntBASIC0.76□□□□□ -2.29
VTNP04004 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
VTNP04004 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
VTNP04004 MIR613-201ENST00000385248 95 ntBASIC0.75□□□□□ -2.29
VTNP04004 AL590095.2-201ENST00000604136 117 ntBASIC0.75□□□□□ -2.29
VTNP04004 FTX_2.1-201ENST00000618816 94 ntBASIC0.75□□□□□ -2.29
VTNP04004 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
VTNP04004 RNU6-886P-201ENST00000384319 105 ntBASIC0.74□□□□□ -2.29
VTNP04004 MIR520F-201ENST00000384824 87 ntBASIC0.74□□□□□ -2.29
VTNP04004 MIR1827-201ENST00000408549 66 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms