Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.08□□□□□ -2.58
HLA-DRAP01903 RNY1P7-201ENST00000384743 110 ntBASIC-1.08□□□□□ -2.58
HLA-DRAP01903 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.08□□□□□ -2.58
HLA-DRAP01903 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.08□□□□□ -2.58
HLA-DRAP01903 RNA5SP153-201ENST00000516498 76 ntBASIC-1.08□□□□□ -2.58
HLA-DRAP01903 AC098479.1-201ENST00000609225 154 ntBASIC-1.08□□□□□ -2.58
HLA-DRAP01903 AC133104.2-201ENST00000615272 193 ntBASIC-1.08□□□□□ -2.58
HLA-DRAP01903 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.09□□□□□ -2.58
HLA-DRAP01903 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.09□□□□□ -2.58
HLA-DRAP01903 RNU6-449P-201ENST00000383914 107 ntBASIC-1.09□□□□□ -2.58
HLA-DRAP01903 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.09□□□□□ -2.58
HLA-DRAP01903 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.09□□□□□ -2.58
HLA-DRAP01903 RNU6-138P-201ENST00000515952 107 ntBASIC-1.09□□□□□ -2.58
HLA-DRAP01903 RNU7-188P-201ENST00000517063 64 ntBASIC-1.09□□□□□ -2.58
HLA-DRAP01903 AC048344.4-201ENST00000619744 527 ntBASIC-1.09□□□□□ -2.58
HLA-DRAP01903 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 MIR599-201ENST00000385069 95 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 U8.20-201ENST00000459445 131 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 RNU7-35P-201ENST00000517174 62 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 AL138825.1-201ENST00000618587 192 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 uc_338.10-201ENST00000621872 182 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 MIR4272-201ENST00000635924 64 ntBASIC-1.1□□□□□ -2.59
HLA-DRAP01903 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 MIR635-201ENST00000384830 98 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 MIR196A1-201ENST00000388006 70 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 RNU4-14P-201ENST00000410858 122 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 MTND1P29-201ENST00000448112 647 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 MRPS35P2-201ENST00000508242 191 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 AC007485.1-201ENST00000616755 206 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 MIR376A2-201ENST00000636782 80 ntBASIC-1.11□□□□□ -2.59
HLA-DRAP01903 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 RNU6-429P-201ENST00000384582 108 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 MIR181B2-201ENST00000385004 89 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 AC097635.1-201ENST00000450678 155 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.12□□□□□ -2.59
HLA-DRAP01903 AC021146.6-201ENST00000514659 117 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 AC097639.2-201ENST00000603159 172 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 AP000770.2-201ENST00000623694 100 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 MIR3688-2-201ENST00000636963 87 ntBASIC-1.12□□□□□ -2.59
HLA-DRAP01903 SNORD114-15-201ENST00000364687 72 ntBASIC-1.13□□□□□ -2.59
HLA-DRAP01903 SNORD114-29-201ENST00000364819 70 ntBASIC-1.13□□□□□ -2.59
HLA-DRAP01903 RNY4P3-201ENST00000365254 95 ntBASIC-1.13□□□□□ -2.59
HLA-DRAP01903 RNU6-455P-201ENST00000384681 107 ntBASIC-1.13□□□□□ -2.59
HLA-DRAP01903 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.13□□□□□ -2.59
HLA-DRAP01903 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.13□□□□□ -2.59
HLA-DRAP01903 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.13□□□□□ -2.59
HLA-DRAP01903 RNA5SP476-201ENST00000516613 103 ntBASIC-1.13□□□□□ -2.59
HLA-DRAP01903 RNU7-30P-201ENST00000516835 62 ntBASIC-1.13□□□□□ -2.59
HLA-DRAP01903 IGKV1-22-201ENST00000524313 326 ntBASIC-1.13□□□□□ -2.59
HLA-DRAP01903 AC006006.1-201ENST00000603082 144 ntBASIC-1.13□□□□□ -2.59
HLA-DRAP01903 U4.5-201ENST00000617137 123 ntBASIC-1.13□□□□□ -2.59
HLA-DRAP01903 RNY1P2-201ENST00000364820 117 ntBASIC-1.14□□□□□ -2.59
HLA-DRAP01903 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.14□□□□□ -2.59
HLA-DRAP01903 RNU6-484P-201ENST00000384016 107 ntBASIC-1.14□□□□□ -2.59
HLA-DRAP01903 MIR204-201ENST00000385200 110 ntBASIC-1.14□□□□□ -2.59
HLA-DRAP01903 PMCHL1-202ENST00000423102 261 ntBASIC-1.14□□□□□ -2.59
HLA-DRAP01903 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.14□□□□□ -2.59
HLA-DRAP01903 MIR4473-201ENST00000583731 91 ntBASIC-1.14□□□□□ -2.59
HLA-DRAP01903 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.14□□□□□ -2.59
HLA-DRAP01903 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.15□□□□□ -2.59
HLA-DRAP01903 RNU1-141P-201ENST00000364623 158 ntBASIC-1.15□□□□□ -2.59
HLA-DRAP01903 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.15□□□□□ -2.59
HLA-DRAP01903 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.15□□□□□ -2.59
HLA-DRAP01903 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.15□□□□□ -2.59
HLA-DRAP01903 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.15□□□□□ -2.59
HLA-DRAP01903 MIR559-201ENST00000385188 96 ntBASIC-1.15□□□□□ -2.59
HLA-DRAP01903 RNU7-13P-201ENST00000516413 62 ntBASIC-1.15□□□□□ -2.59
HLA-DRAP01903 RNU6-699P-201ENST00000517081 110 ntBASIC-1.15□□□□□ -2.59
HLA-DRAP01903 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.15□□□□□ -2.59
HLA-DRAP01903 AC025253.1-201ENST00000613623 543 ntBASIC-1.15□□□□□ -2.59
HLA-DRAP01903 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 RNY3P5-201ENST00000384127 102 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 SNORD116-1-201ENST00000384335 95 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 AL603914.1-201ENST00000401964 204 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 RNU6-507P-201ENST00000516045 100 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 AC040926.1-201ENST00000530195 238 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 AC024909.2-201ENST00000553035 286 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 MIR3129-201ENST00000581095 76 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 MIR3920-201ENST00000581751 86 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 AC069503.3-201ENST00000618674 145 ntBASIC-1.16□□□□□ -2.6
HLA-DRAP01903 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.17□□□□□ -2.6
HLA-DRAP01903 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms