Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RNU4-90P-201ENST00000362773 141 ntBASIC-0.78□□□□□ -2.53
SNX4O95219 SNORA63.5-201ENST00000363548 123 ntBASIC-0.78□□□□□ -2.53
SNX4O95219 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.78□□□□□ -2.53
SNX4O95219 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.78□□□□□ -2.53
SNX4O95219 PMCHL1-202ENST00000423102 261 ntBASIC-0.78□□□□□ -2.53
SNX4O95219 MIR4263-201ENST00000584745 83 ntBASIC-0.78□□□□□ -2.53
SNX4O95219 uc_338.28-201ENST00000612082 187 ntBASIC-0.78□□□□□ -2.53
SNX4O95219 MTND4LP32-201ENST00000636111 270 ntBASIC-0.78□□□□□ -2.53
SNX4O95219 MIR6841-201ENST00000637129 72 ntBASIC-0.78□□□□□ -2.53
SNX4O95219 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.79□□□□□ -2.54
SNX4O95219 RNY1P13-201ENST00000365030 105 ntBASIC-0.79□□□□□ -2.54
SNX4O95219 SNORA18-201ENST00000384416 132 ntBASIC-0.79□□□□□ -2.54
SNX4O95219 MIR876-201ENST00000401147 81 ntBASIC-0.79□□□□□ -2.54
SNX4O95219 RNU6-893P-201ENST00000458841 100 ntBASIC-0.79□□□□□ -2.54
SNX4O95219 AC092794.1-201ENST00000612734 582 ntBASIC-0.79□□□□□ -2.54
SNX4O95219 RNU4-84P-201ENST00000364200 139 ntBASIC-0.8□□□□□ -2.54
SNX4O95219 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.8□□□□□ -2.54
SNX4O95219 AC244505.6-201ENST00000452829 130 ntBASIC-0.8□□□□□ -2.54
SNX4O95219 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.8□□□□□ -2.54
SNX4O95219 AC108676.2-201ENST00000605225 163 ntBASIC-0.8□□□□□ -2.54
SNX4O95219 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.81□□□□□ -2.54
SNX4O95219 SNORA25.7-201ENST00000364375 127 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 RNA5SP205-201ENST00000364653 136 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 RNA5SP25-201ENST00000410815 110 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 RNU6-507P-201ENST00000516045 100 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 RNU6-531P-201ENST00000516694 104 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 MIR5197-201ENST00000583721 112 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 MIR4436A-201ENST00000585278 85 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 MIR376A1-201ENST00000616574 68 ntBASIC-0.81□□□□□ -2.54
SNX4O95219 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 SNORD116-29-201ENST00000384516 83 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
SNX4O95219 SNORD75.1-201ENST00000408373 60 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 RNU6-130P-201ENST00000411112 103 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 HSPE1P25-201ENST00000455484 251 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 AC040926.1-201ENST00000530195 238 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 AC097639.2-201ENST00000603159 172 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 SNORD58B-201ENST00000607313 66 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 PART1_1.1-201ENST00000611761 217 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 MIR6507-201ENST00000613630 70 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 AC021613.1-201ENST00000623880 111 ntBASIC-0.82□□□□□ -2.54
SNX4O95219 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 RNU6-484P-201ENST00000384016 107 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 SNORA1-201ENST00000384107 130 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 RNY3P5-201ENST00000384127 102 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 SNORD116-4-201ENST00000384733 96 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 RNU6-876P-201ENST00000391295 104 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 FGF7P6-202ENST00000451282 293 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 RNU7-70P-201ENST00000516941 66 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 NAMPTP3-201ENST00000569273 224 ntBASIC-0.83□□□□□ -2.54
SNX4O95219 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.84□□□□□ -2.54
SNX4O95219 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.84□□□□□ -2.54
SNX4O95219 RNU4-70P-201ENST00000384579 139 ntBASIC-0.84□□□□□ -2.54
SNX4O95219 MIR224-201ENST00000384889 81 ntBASIC-0.84□□□□□ -2.54
SNX4O95219 MT-TL1-201ENST00000386347 75 ntBASIC-0.84□□□□□ -2.54
SNX4O95219 AL589823.1-201ENST00000429577 183 ntBASIC-0.84□□□□□ -2.54
SNX4O95219 AL731563.1-201ENST00000442202 214 ntBASIC-0.84□□□□□ -2.54
SNX4O95219 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.84□□□□□ -2.54
SNX4O95219 RNU7-104P-201ENST00000459398 79 ntBASIC-0.84□□□□□ -2.54
SNX4O95219 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.84□□□□□ -2.54
SNX4O95219 AC037487.3-201ENST00000606668 112 ntBASIC-0.84□□□□□ -2.54
SNX4O95219 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.84□□□□□ -2.54
SNX4O95219 AC084368.1-201ENST00000620935 65 ntBASIC-0.84□□□□□ -2.54
SNX4O95219 MIR6086-201ENST00000638065 55 ntBASIC-0.84□□□□□ -2.54
SNX4O95219 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.85□□□□□ -2.55
SNX4O95219 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.85□□□□□ -2.55
SNX4O95219 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.85□□□□□ -2.55
SNX4O95219 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.85□□□□□ -2.55
SNX4O95219 RNU7-161P-201ENST00000517289 62 ntBASIC-0.85□□□□□ -2.55
SNX4O95219 AC104985.2-201ENST00000620598 500 ntBASIC-0.85□□□□□ -2.55
SNX4O95219 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.86□□□□□ -2.55
SNX4O95219 RNA5SP133-201ENST00000363368 119 ntBASIC-0.86□□□□□ -2.55
SNX4O95219 SNORD95.1-201ENST00000364099 68 ntBASIC-0.86□□□□□ -2.55
SNX4O95219 RNU6-702P-201ENST00000364982 107 ntBASIC-0.86□□□□□ -2.55
SNX4O95219 RNU6-102P-201ENST00000384485 104 ntBASIC-0.86□□□□□ -2.55
SNX4O95219 MIR626-201ENST00000385032 94 ntBASIC-0.86□□□□□ -2.55
SNX4O95219 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.86□□□□□ -2.55
SNX4O95219 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.86□□□□□ -2.55
SNX4O95219 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.86□□□□□ -2.55
SNX4O95219 AC084781.2-201ENST00000615568 161 ntBASIC-0.86□□□□□ -2.55
SNX4O95219 SNORA25.1-201ENST00000362326 128 ntBASIC-0.87□□□□□ -2.55
SNX4O95219 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.87□□□□□ -2.55
SNX4O95219 RNA5SP368-201ENST00000364298 116 ntBASIC-0.87□□□□□ -2.55
SNX4O95219 SNORD41.1-201ENST00000391000 69 ntBASIC-0.87□□□□□ -2.55
SNX4O95219 RNU7-152P-201ENST00000458982 64 ntBASIC-0.87□□□□□ -2.55
SNX4O95219 RNU6-976P-201ENST00000516086 111 ntBASIC-0.87□□□□□ -2.55
SNX4O95219 SNORD114-14-201ENST00000362723 75 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 292.4 ms