Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SNORD111.1-201ENST00000516421 86 ntBASIC1.67□□□□□ -2.14
CDKL5O76039 MIR548AO-201ENST00000579992 96 ntBASIC1.67□□□□□ -2.14
CDKL5O76039 MIR548AE2-201ENST00000583456 67 ntBASIC1.67□□□□□ -2.14
CDKL5O76039 AC103810.8-201ENST00000607347 118 ntBASIC1.67□□□□□ -2.14
CDKL5O76039 SNORD115-2-201ENST00000362842 82 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 SNORD115-20-201ENST00000365099 82 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 RNA5SP261-201ENST00000410536 106 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 RNU6-893P-201ENST00000458841 100 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 MIR1270-201ENST00000459320 83 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 RNU6-168P-201ENST00000516189 101 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 RNA5SP33-201ENST00000516687 98 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 AC068339.1-201ENST00000526965 141 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 MIR5009-201ENST00000578736 100 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 AP000942.3-201ENST00000603702 160 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 AL645939.4-201ENST00000604495 135 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 Y_RNA.773-201ENST00000607168 90 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 RNU6-94P-201ENST00000607728 107 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 MIR8074-201ENST00000615081 81 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.66□□□□□ -2.14
CDKL5O76039 MIR4251-201ENST00000635819 61 ntBASIC1.66□□□□□ -2.14
CDKL5O76039 SNORA1.1-201ENST00000364671 133 ntBASIC1.65□□□□□ -2.15
CDKL5O76039 RPS3AP1-201ENST00000413190 320 ntBASIC1.65□□□□□ -2.15
CDKL5O76039 AC090844.1-201ENST00000422019 156 ntBASIC1.65□□□□□ -2.15
CDKL5O76039 HSPE1P24-201ENST00000450782 238 ntBASIC1.65□□□□□ -2.15
CDKL5O76039 AC005908.1-201ENST00000468701 347 ntBASIC1.65□□□□□ -2.15
CDKL5O76039 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.65□□□□□ -2.15
CDKL5O76039 MIR1255B1-201ENST00000636325 63 ntBASIC1.65□□□□□ -2.15
CDKL5O76039 AL161722.3-201ENST00000605789 2983 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 RNU6-1298P-201ENST00000362456 101 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 SNORD115-19-201ENST00000363098 82 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 SNORD115-18-201ENST00000363293 82 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 SNORD115-17-201ENST00000364612 82 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 Y_RNA.328-201ENST00000365208 113 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 Y_RNA.495-201ENST00000384435 112 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 RNU4-69P-201ENST00000410677 143 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.64□□□□□ -2.15
CDKL5O76039 AL096861.1-201ENST00000610899 123 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 AL162726.3-218ENST00000636401 95 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 Z97988.1-201ENST00000637697 135 ntBASIC1.64□□□□□ -2.15
CDKL5O76039 RNU6-766P-201ENST00000362478 107 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 Y_RNA.309-201ENST00000365046 111 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 RNU6-32P-201ENST00000383948 107 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 RNU6-756P-201ENST00000383997 107 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 RNU6-13P-201ENST00000384248 107 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 RNU6-12P-201ENST00000384604 107 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 RNU6-41P-201ENST00000384741 107 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 RNU6-816P-201ENST00000390914 107 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 RNU6-1268P-201ENST00000391214 107 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 RNU6-1239P-201ENST00000391310 107 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 MIR1302-5-201ENST00000408164 150 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 RNU6-602P-201ENST00000411155 105 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 AC108667.1-201ENST00000428618 249 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 SNORA44.1-201ENST00000517031 108 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 MIR3192-201ENST00000584920 77 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 MIR8065-201ENST00000620577 100 ntBASIC1.63□□□□□ -2.15
CDKL5O76039 Y_RNA.299-201ENST00000364973 94 ntBASIC1.62□□□□□ -2.15
CDKL5O76039 SNORA32-201ENST00000384072 121 ntBASIC1.62□□□□□ -2.15
CDKL5O76039 SNORA51.5-201ENST00000384126 131 ntBASIC1.62□□□□□ -2.15
CDKL5O76039 SNORA17.3-201ENST00000391159 129 ntBASIC1.62□□□□□ -2.15
CDKL5O76039 SNORA19.1-201ENST00000410656 129 ntBASIC1.62□□□□□ -2.15
CDKL5O76039 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.62□□□□□ -2.15
CDKL5O76039 RPL39P25-201ENST00000449384 154 ntBASIC1.62□□□□□ -2.15
CDKL5O76039 AC009474.2-201ENST00000451383 136 ntBASIC1.62□□□□□ -2.15
CDKL5O76039 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.62□□□□□ -2.15
CDKL5O76039 MIR8063-201ENST00000621930 81 ntBASIC1.62□□□□□ -2.15
CDKL5O76039 MIR302D-201ENST00000362275 68 ntBASIC1.61□□□□□ -2.15
CDKL5O76039 RNU6-342P-201ENST00000384521 104 ntBASIC1.61□□□□□ -2.15
CDKL5O76039 RNU6-537P-201ENST00000517277 103 ntBASIC1.61□□□□□ -2.15
CDKL5O76039 CYP3A52P-201ENST00000563326 91 ntBASIC1.61□□□□□ -2.15
CDKL5O76039 MIR4303-201ENST00000581299 66 ntBASIC1.61□□□□□ -2.15
CDKL5O76039 RNU6-616P-201ENST00000384353 107 ntBASIC1.6□□□□□ -2.15
CDKL5O76039 AC245047.7-201ENST00000440265 293 ntBASIC1.6□□□□□ -2.15
CDKL5O76039 snoU13.25-201ENST00000458945 104 ntBASIC1.6□□□□□ -2.15
CDKL5O76039 RNA5SP445-201ENST00000515889 115 ntBASIC1.6□□□□□ -2.15
CDKL5O76039 RNA5SP61-201ENST00000516453 100 ntBASIC1.6□□□□□ -2.15
CDKL5O76039 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.6□□□□□ -2.15
CDKL5O76039 GHRLOS.1-201ENST00000610995 70 ntBASIC1.6□□□□□ -2.15
CDKL5O76039 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CDKL5O76039 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
CDKL5O76039 RNA5SP48-201ENST00000363969 126 ntBASIC1.59□□□□□ -2.15
CDKL5O76039 MIR1302-7-201ENST00000408841 72 ntBASIC1.59□□□□□ -2.15
CDKL5O76039 MIR1912-201ENST00000410389 80 ntBASIC1.59□□□□□ -2.15
CDKL5O76039 AC019176.1-201ENST00000518519 225 ntBASIC1.59□□□□□ -2.15
CDKL5O76039 AC141557.1-201ENST00000540982 400 ntBASIC1.59□□□□□ -2.15
CDKL5O76039 AL357312.1-201ENST00000603879 298 ntBASIC1.59□□□□□ -2.15
CDKL5O76039 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
CDKL5O76039 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CDKL5O76039 SNORA25.3-201ENST00000363205 127 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 RNU4-67P-201ENST00000364569 141 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 SNORA18-201ENST00000384416 132 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 MIR590-201ENST00000385008 97 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 MIR758-201ENST00000390227 88 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 SNORD77B-201ENST00000391112 67 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 AL353813.1-201ENST00000440700 253 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 RPS29P23-201ENST00000458635 123 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 snoU13.9-201ENST00000458927 103 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 Y_RNA.677-201ENST00000516401 85 ntBASIC1.58□□□□□ -2.16
CDKL5O76039 RNA5SP170-201ENST00000517150 101 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms