Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RNU6-521P-201ENST00000516663 105 ntBASIC1.91□□□□□ -2.1
SHOXO15266 MIR3937-201ENST00000580135 106 ntBASIC1.91□□□□□ -2.1
SHOXO15266 MIR3192-201ENST00000584920 77 ntBASIC1.91□□□□□ -2.1
SHOXO15266 AP000753.3-201ENST00000604083 169 ntBASIC1.91□□□□□ -2.1
SHOXO15266 AC096720.1-201ENST00000604441 183 ntBASIC1.91□□□□□ -2.1
SHOXO15266 AL512310.12-203ENST00000640543 90 ntBASIC1.91□□□□□ -2.1
SHOXO15266 MIR302D-201ENST00000362275 68 ntBASIC1.9□□□□□ -2.11
SHOXO15266 Y_RNA.96-201ENST00000363092 109 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-832P-201ENST00000363319 107 ntBASIC1.9□□□□□ -2.11
SHOXO15266 SNORD115-35-201ENST00000365122 82 ntBASIC1.9□□□□□ -2.11
SHOXO15266 Y_RNA.377-201ENST00000365644 108 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-905P-201ENST00000384434 107 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNY4P30-201ENST00000410216 95 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-447P-201ENST00000410293 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-1118P-201ENST00000410382 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-1076P-201ENST00000410397 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-355P-201ENST00000410427 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-791P-201ENST00000410467 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-705P-201ENST00000410601 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-1100P-201ENST00000410691 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-860P-201ENST00000410860 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-1217P-201ENST00000411276 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 RNU6-785P-201ENST00000411324 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
SHOXO15266 U6.90-201ENST00000614007 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 U6.70-201ENST00000620287 104 ntBASIC1.9□□□□□ -2.11
SHOXO15266 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
SHOXO15266 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
SHOXO15266 RNU6-640P-201ENST00000363693 105 ntBASIC1.89□□□□□ -2.11
SHOXO15266 SNORD1A-201ENST00000364968 72 ntBASIC1.89□□□□□ -2.11
SHOXO15266 MIR577-201ENST00000385196 96 ntBASIC1.89□□□□□ -2.11
SHOXO15266 RNU6-679P-201ENST00000391003 106 ntBASIC1.89□□□□□ -2.11
SHOXO15266 AC090844.1-201ENST00000422019 156 ntBASIC1.89□□□□□ -2.11
SHOXO15266 AC005908.1-201ENST00000468701 347 ntBASIC1.89□□□□□ -2.11
SHOXO15266 AL133373.1-201ENST00000497098 94 ntBASIC1.89□□□□□ -2.11
SHOXO15266 AC108210.2-201ENST00000503681 201 ntBASIC1.89□□□□□ -2.11
SHOXO15266 RNU7-79P-201ENST00000516082 62 ntBASIC1.89□□□□□ -2.11
SHOXO15266 RNU11-2P-201ENST00000516898 142 ntBASIC1.89□□□□□ -2.11
SHOXO15266 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.89□□□□□ -2.11
SHOXO15266 MIR4264-201ENST00000583520 66 ntBASIC1.89□□□□□ -2.11
SHOXO15266 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
SHOXO15266 RNU6-1313P-201ENST00000362622 102 ntBASIC1.88□□□□□ -2.11
SHOXO15266 SNORD114-10-201ENST00000363409 72 ntBASIC1.88□□□□□ -2.11
SHOXO15266 SNORD45B-201ENST00000364617 72 ntBASIC1.88□□□□□ -2.11
SHOXO15266 MIR605-201ENST00000385078 83 ntBASIC1.88□□□□□ -2.11
SHOXO15266 RNU6-482P-201ENST00000391068 107 ntBASIC1.88□□□□□ -2.11
SHOXO15266 AC019129.1-201ENST00000403786 261 ntBASIC1.88□□□□□ -2.11
SHOXO15266 AC108938.1-201ENST00000451204 136 ntBASIC1.88□□□□□ -2.11
SHOXO15266 RNU6-109P-201ENST00000516364 107 ntBASIC1.88□□□□□ -2.11
SHOXO15266 RNU6-184P-201ENST00000516514 107 ntBASIC1.88□□□□□ -2.11
SHOXO15266 AC019176.1-201ENST00000518519 225 ntBASIC1.88□□□□□ -2.11
SHOXO15266 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.88□□□□□ -2.11
SHOXO15266 AC016717.2-201ENST00000609089 5141 ntBASIC1.87□□□□□ -2.11
SHOXO15266 RNU6-865P-201ENST00000364772 107 ntBASIC1.87□□□□□ -2.11
SHOXO15266 Y_RNA.369-201ENST00000365568 117 ntBASIC1.87□□□□□ -2.11
SHOXO15266 MIR206-201ENST00000384872 86 ntBASIC1.87□□□□□ -2.11
SHOXO15266 MT-TN-201ENST00000387400 73 ntBASIC1.87□□□□□ -2.11
SHOXO15266 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
SHOXO15266 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.87□□□□□ -2.11
SHOXO15266 MIR5582-201ENST00000579697 68 ntBASIC1.87□□□□□ -2.11
SHOXO15266 MIR5002-201ENST00000584713 97 ntBASIC1.87□□□□□ -2.11
SHOXO15266 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SHOXO15266 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SHOXO15266 SNORA25.3-201ENST00000363205 127 ntBASIC1.86□□□□□ -2.11
SHOXO15266 RNU6-1201P-201ENST00000384227 107 ntBASIC1.86□□□□□ -2.11
SHOXO15266 RNU6-1237P-201ENST00000384777 107 ntBASIC1.86□□□□□ -2.11
SHOXO15266 MTATP8P2-201ENST00000435212 202 ntBASIC1.86□□□□□ -2.11
SHOXO15266 AC027119.1-201ENST00000440877 241 ntBASIC1.86□□□□□ -2.11
SHOXO15266 AC108729.3-201ENST00000513484 108 ntBASIC1.86□□□□□ -2.11
SHOXO15266 SNORD67.1-201ENST00000516618 108 ntBASIC1.86□□□□□ -2.11
SHOXO15266 PRELID3BP2-201ENST00000605362 201 ntBASIC1.86□□□□□ -2.11
SHOXO15266 AC046143.2-201ENST00000609789 160 ntBASIC1.86□□□□□ -2.11
SHOXO15266 AL442128.1-201ENST00000615151 90 ntBASIC1.86□□□□□ -2.11
SHOXO15266 AL662814.1-201ENST00000617364 121 ntBASIC1.86□□□□□ -2.11
SHOXO15266 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SHOXO15266 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
SHOXO15266 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SHOXO15266 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
SHOXO15266 MIR103A2-201ENST00000362154 78 ntBASIC1.85□□□□□ -2.11
SHOXO15266 RNA5SP425-201ENST00000410336 112 ntBASIC1.85□□□□□ -2.11
SHOXO15266 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
SHOXO15266 snoU13.23-201ENST00000458863 104 ntBASIC1.85□□□□□ -2.11
SHOXO15266 snoU13.2-201ENST00000459201 104 ntBASIC1.85□□□□□ -2.11
SHOXO15266 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
SHOXO15266 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
SHOXO15266 AP000942.3-201ENST00000603702 160 ntBASIC1.85□□□□□ -2.11
SHOXO15266 MIR6766-201ENST00000622641 72 ntBASIC1.85□□□□□ -2.11
SHOXO15266 Y_RNA.220-201ENST00000364244 109 ntBASIC1.84□□□□□ -2.11
SHOXO15266 AC096949.1-201ENST00000412047 152 ntBASIC1.84□□□□□ -2.11
SHOXO15266 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.84□□□□□ -2.11
SHOXO15266 snoU13.15-201ENST00000459407 104 ntBASIC1.84□□□□□ -2.11
SHOXO15266 Y_RNA.659-201ENST00000515994 113 ntBASIC1.84□□□□□ -2.11
SHOXO15266 RNU7-137P-201ENST00000516788 62 ntBASIC1.84□□□□□ -2.11
SHOXO15266 AC141846.1-201ENST00000568348 142 ntBASIC1.84□□□□□ -2.11
SHOXO15266 MIR5007-201ENST00000583098 95 ntBASIC1.84□□□□□ -2.11
SHOXO15266 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
SHOXO15266 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SHOXO15266 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SHOXO15266 Y_RNA.98-201ENST00000363109 102 ntBASIC1.83□□□□□ -2.12
SHOXO15266 RNA5SP264-201ENST00000363115 107 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms