Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RNU6-1110P-201ENST00000516462 101 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 RNU6-861P-201ENST00000516745 106 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 MIR3646-201ENST00000578301 84 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 MIR4714-201ENST00000580728 77 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.89□□□□□ -2.27
ATP2A1O14983 AL136317.1-201ENST00000612653 226 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 AC004792.1-201ENST00000614523 137 ntBASIC0.89□□□□□ -2.27
ATP2A1O14983 RNU6-1336P-201ENST00000383886 109 ntBASIC0.88□□□□□ -2.27
ATP2A1O14983 SNORD89-201ENST00000390981 114 ntBASIC0.88□□□□□ -2.27
ATP2A1O14983 MIR1827-201ENST00000408549 66 ntBASIC0.88□□□□□ -2.27
ATP2A1O14983 RNU5E-9P-201ENST00000411164 104 ntBASIC0.88□□□□□ -2.27
ATP2A1O14983 RNU7-45P-201ENST00000459460 63 ntBASIC0.88□□□□□ -2.27
ATP2A1O14983 Y_RNA.662-201ENST00000516028 97 ntBASIC0.88□□□□□ -2.27
ATP2A1O14983 MIR3152-201ENST00000579801 74 ntBASIC0.88□□□□□ -2.27
ATP2A1O14983 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.88□□□□□ -2.27
ATP2A1O14983 MTND5P32-201ENST00000560711 1802 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 MIR1-1-201ENST00000362147 71 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 Y_RNA.52-201ENST00000362760 96 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 RNU6-1082P-201ENST00000364574 107 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 RNU6-818P-201ENST00000364837 108 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 Y_RNA.441-201ENST00000384123 112 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 SNORA20-201ENST00000384662 132 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 snoU13.2-201ENST00000459201 104 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 RNU7-121P-201ENST00000516604 62 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 AC025627.3-201ENST00000582078 182 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 MIR6740-201ENST00000618268 113 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 AC021613.1-201ENST00000623880 111 ntBASIC0.87□□□□□ -2.27
ATP2A1O14983 RNU6-1318P-201ENST00000365389 103 ntBASIC0.86□□□□□ -2.27
ATP2A1O14983 MIR588-201ENST00000384900 83 ntBASIC0.86□□□□□ -2.27
ATP2A1O14983 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
ATP2A1O14983 RNU6-1135P-201ENST00000411083 103 ntBASIC0.86□□□□□ -2.27
ATP2A1O14983 MTND5P15-201ENST00000434246 349 ntBASIC0.86□□□□□ -2.27
ATP2A1O14983 snoU13.21-201ENST00000459368 105 ntBASIC0.86□□□□□ -2.27
ATP2A1O14983 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.86□□□□□ -2.27
ATP2A1O14983 MIR6844-201ENST00000637122 62 ntBASIC0.86□□□□□ -2.27
ATP2A1O14983 SNORD114-26-201ENST00000363543 72 ntBASIC0.85□□□□□ -2.27
ATP2A1O14983 RNU6-934P-201ENST00000365154 107 ntBASIC0.85□□□□□ -2.27
ATP2A1O14983 MIR563-201ENST00000385080 79 ntBASIC0.85□□□□□ -2.27
ATP2A1O14983 RNU6-1165P-201ENST00000410119 107 ntBASIC0.85□□□□□ -2.27
ATP2A1O14983 MIR18B-201ENST00000454574 71 ntBASIC0.85□□□□□ -2.27
ATP2A1O14983 RNA5SP480-201ENST00000516840 109 ntBASIC0.85□□□□□ -2.27
ATP2A1O14983 RNU6-182P-201ENST00000516970 105 ntBASIC0.85□□□□□ -2.27
ATP2A1O14983 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.85□□□□□ -2.27
ATP2A1O14983 DNAJC19P2-201ENST00000593340 302 ntBASIC0.85□□□□□ -2.27
ATP2A1O14983 MIR6835-201ENST00000621552 64 ntBASIC0.85□□□□□ -2.27
ATP2A1O14983 MIR6841-201ENST00000637129 72 ntBASIC0.85□□□□□ -2.27
ATP2A1O14983 MIR100-201ENST00000385259 80 ntBASIC0.84□□□□□ -2.27
ATP2A1O14983 SNORD12C-201ENST00000386307 89 ntBASIC0.84□□□□□ -2.27
ATP2A1O14983 SNORD83.1-201ENST00000411362 77 ntBASIC0.84□□□□□ -2.27
ATP2A1O14983 RPS26P5-201ENST00000418544 335 ntBASIC0.84□□□□□ -2.27
ATP2A1O14983 RNA5SP236-201ENST00000516169 116 ntBASIC0.84□□□□□ -2.27
ATP2A1O14983 AC133485.1-201ENST00000567176 124 ntBASIC0.84□□□□□ -2.27
ATP2A1O14983 AC138907.6-201ENST00000568401 126 ntBASIC0.84□□□□□ -2.27
ATP2A1O14983 MIR6866-201ENST00000638146 69 ntBASIC0.84□□□□□ -2.27
ATP2A1O14983 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
ATP2A1O14983 RNU6-369P-201ENST00000362515 102 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 SNORA22.1-201ENST00000362701 134 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 RNU6-1335P-201ENST00000365426 107 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 RNY1P6-201ENST00000384193 109 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 RNU2-64P-201ENST00000411315 191 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 RNU6-893P-201ENST00000458841 100 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 AC113410.1-201ENST00000505029 247 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 MIR4771-2-201ENST00000577758 74 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 MIR4771-1-201ENST00000582617 74 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 uc_338.6-201ENST00000613544 171 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 AC010332.2-201ENST00000613083 1904 ntBASIC0.83□□□□□ -2.28
ATP2A1O14983 Y_RNA.272-201ENST00000364696 102 ntBASIC0.82□□□□□ -2.28
ATP2A1O14983 MT-TF-201ENST00000387314 71 ntBASIC0.82□□□□□ -2.28
ATP2A1O14983 SNORD37.2-201ENST00000391075 66 ntBASIC0.82□□□□□ -2.28
ATP2A1O14983 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
ATP2A1O14983 RNU6-794P-201ENST00000517261 64 ntBASIC0.82□□□□□ -2.28
ATP2A1O14983 AL353765.1-201ENST00000605514 183 ntBASIC0.82□□□□□ -2.28
ATP2A1O14983 RNU4-16P-201ENST00000364737 141 ntBASIC0.81□□□□□ -2.28
ATP2A1O14983 Y_RNA.497-201ENST00000384447 98 ntBASIC0.81□□□□□ -2.28
ATP2A1O14983 RNU6-588P-201ENST00000410281 105 ntBASIC0.81□□□□□ -2.28
ATP2A1O14983 MTATP6P21-201ENST00000440681 189 ntBASIC0.81□□□□□ -2.28
ATP2A1O14983 AC090425.1-201ENST00000610007 140 ntBASIC0.81□□□□□ -2.28
ATP2A1O14983 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.81□□□□□ -2.28
ATP2A1O14983 MIR6513-201ENST00000621188 64 ntBASIC0.81□□□□□ -2.28
ATP2A1O14983 MIR3658-201ENST00000636291 56 ntBASIC0.81□□□□□ -2.28
ATP2A1O14983 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
ATP2A1O14983 SNORD105-201ENST00000386910 85 ntBASIC0.8□□□□□ -2.28
ATP2A1O14983 MIR30D-201ENST00000362283 70 ntBASIC0.79□□□□□ -2.28
ATP2A1O14983 RNU6-349P-201ENST00000362402 107 ntBASIC0.79□□□□□ -2.28
ATP2A1O14983 SNORD99-201ENST00000408612 74 ntBASIC0.79□□□□□ -2.28
ATP2A1O14983 RNA5SP237-201ENST00000410414 113 ntBASIC0.79□□□□□ -2.28
ATP2A1O14983 AC074198.2-201ENST00000508153 258 ntBASIC0.79□□□□□ -2.28
ATP2A1O14983 RNU6-977P-201ENST00000516411 103 ntBASIC0.79□□□□□ -2.28
ATP2A1O14983 MIR4676-201ENST00000583078 72 ntBASIC0.79□□□□□ -2.28
ATP2A1O14983 AC011603.4-201ENST00000611325 277 ntBASIC0.79□□□□□ -2.28
ATP2A1O14983 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ATP2A1O14983 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.78□□□□□ -2.28
ATP2A1O14983 AC004812.1-201ENST00000540773 146 ntBASIC0.78□□□□□ -2.28
ATP2A1O14983 AL590095.2-201ENST00000604136 117 ntBASIC0.78□□□□□ -2.28
ATP2A1O14983 AL662814.1-201ENST00000617364 121 ntBASIC0.78□□□□□ -2.28
ATP2A1O14983 FTX_2.1-201ENST00000618816 94 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms