Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AL078603.1-201ENST00000603824 313 ntBASIC0.64□□□□□ -2.31
RTCAO00442 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
RTCAO00442 AC021613.1-201ENST00000623880 111 ntBASIC0.64□□□□□ -2.31
RTCAO00442 AL596211.1-201ENST00000569873 2277 ntBASIC0.64□□□□□ -2.31
RTCAO00442 MIR342-201ENST00000362212 99 ntBASIC0.63□□□□□ -2.31
RTCAO00442 Y_RNA.240-201ENST00000364469 95 ntBASIC0.63□□□□□ -2.31
RTCAO00442 Y_RNA.337-201ENST00000365312 102 ntBASIC0.63□□□□□ -2.31
RTCAO00442 SNORD83.1-201ENST00000411362 77 ntBASIC0.63□□□□□ -2.31
RTCAO00442 AC244098.3-201ENST00000424803 96 ntBASIC0.63□□□□□ -2.31
RTCAO00442 RNU7-120P-201ENST00000459334 63 ntBASIC0.63□□□□□ -2.31
RTCAO00442 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
RTCAO00442 RNU7-70P-201ENST00000516941 66 ntBASIC0.63□□□□□ -2.31
RTCAO00442 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
RTCAO00442 MIR4676-201ENST00000583078 72 ntBASIC0.63□□□□□ -2.31
RTCAO00442 MTND5P32-201ENST00000560711 1802 ntBASIC0.63□□□□□ -2.31
RTCAO00442 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
RTCAO00442 RNU4-84P-201ENST00000364200 139 ntBASIC0.62□□□□□ -2.31
RTCAO00442 RNU4-45P-201ENST00000365469 141 ntBASIC0.62□□□□□ -2.31
RTCAO00442 Y_RNA.441-201ENST00000384123 112 ntBASIC0.62□□□□□ -2.31
RTCAO00442 Y_RNA.521-201ENST00000384560 114 ntBASIC0.62□□□□□ -2.31
RTCAO00442 SNORA20-201ENST00000384662 132 ntBASIC0.62□□□□□ -2.31
RTCAO00442 RNU6-768P-201ENST00000384683 107 ntBASIC0.62□□□□□ -2.31
RTCAO00442 SNORD12C-201ENST00000386307 89 ntBASIC0.62□□□□□ -2.31
RTCAO00442 RNU6-239P-201ENST00000390990 99 ntBASIC0.62□□□□□ -2.31
RTCAO00442 RNU1-119P-201ENST00000391122 165 ntBASIC0.62□□□□□ -2.31
RTCAO00442 SNORA75.5-201ENST00000391291 81 ntBASIC0.62□□□□□ -2.31
RTCAO00442 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.62□□□□□ -2.31
RTCAO00442 RNU7-56P-201ENST00000458744 62 ntBASIC0.62□□□□□ -2.31
RTCAO00442 RNU7-45P-201ENST00000459460 63 ntBASIC0.62□□□□□ -2.31
RTCAO00442 RNU6-977P-201ENST00000516411 103 ntBASIC0.62□□□□□ -2.31
RTCAO00442 MIR4771-2-201ENST00000577758 74 ntBASIC0.62□□□□□ -2.31
RTCAO00442 MIR4771-1-201ENST00000582617 74 ntBASIC0.62□□□□□ -2.31
RTCAO00442 AC020891.4-201ENST00000605745 93 ntBASIC0.62□□□□□ -2.31
RTCAO00442 AC010332.2-201ENST00000613083 1904 ntBASIC0.62□□□□□ -2.31
RTCAO00442 SNORA22.1-201ENST00000362701 134 ntBASIC0.61□□□□□ -2.31
RTCAO00442 Y_RNA.52-201ENST00000362760 96 ntBASIC0.61□□□□□ -2.31
RTCAO00442 RNU6-1318P-201ENST00000365389 103 ntBASIC0.61□□□□□ -2.31
RTCAO00442 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
RTCAO00442 MIR573-201ENST00000384964 99 ntBASIC0.61□□□□□ -2.31
RTCAO00442 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
RTCAO00442 RNA5SP220-201ENST00000516298 104 ntBASIC0.61□□□□□ -2.31
RTCAO00442 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.61□□□□□ -2.31
RTCAO00442 AC133485.1-201ENST00000567176 124 ntBASIC0.61□□□□□ -2.31
RTCAO00442 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
RTCAO00442 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
RTCAO00442 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.61□□□□□ -2.31
RTCAO00442 RNU6-349P-201ENST00000362402 107 ntBASIC0.6□□□□□ -2.31
RTCAO00442 Y_RNA.224-201ENST00000364308 111 ntBASIC0.6□□□□□ -2.31
RTCAO00442 RNY1P6-201ENST00000384193 109 ntBASIC0.6□□□□□ -2.31
RTCAO00442 MIR125B2-201ENST00000385128 89 ntBASIC0.6□□□□□ -2.31
RTCAO00442 MIR938-201ENST00000401216 83 ntBASIC0.6□□□□□ -2.31
RTCAO00442 MIR548J-201ENST00000408833 112 ntBASIC0.6□□□□□ -2.31
RTCAO00442 RNU6-1135P-201ENST00000411083 103 ntBASIC0.6□□□□□ -2.31
RTCAO00442 Y_RNA.793-201ENST00000411222 111 ntBASIC0.6□□□□□ -2.31
RTCAO00442 RNU7-185P-201ENST00000459215 60 ntBASIC0.6□□□□□ -2.31
RTCAO00442 RNU6-138P-201ENST00000515952 107 ntBASIC0.6□□□□□ -2.31
RTCAO00442 AP002392.1-201ENST00000537692 208 ntBASIC0.6□□□□□ -2.31
RTCAO00442 MIR4714-201ENST00000580728 77 ntBASIC0.6□□□□□ -2.31
RTCAO00442 SNORD92-201ENST00000585078 85 ntBASIC0.6□□□□□ -2.31
RTCAO00442 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.6□□□□□ -2.31
RTCAO00442 AC011603.4-201ENST00000611325 277 ntBASIC0.6□□□□□ -2.31
RTCAO00442 AL662814.1-201ENST00000617364 121 ntBASIC0.6□□□□□ -2.31
RTCAO00442 AC078938.1-201ENST00000620993 318 ntBASIC0.6□□□□□ -2.31
RTCAO00442 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.31
RTCAO00442 Y_RNA.29-201ENST00000362570 113 ntBASIC0.59□□□□□ -2.31
RTCAO00442 Y_RNA.257-201ENST00000364596 102 ntBASIC0.59□□□□□ -2.31
RTCAO00442 RNU6-388P-201ENST00000517012 105 ntBASIC0.59□□□□□ -2.31
RTCAO00442 RNU6-389P-201ENST00000517048 105 ntBASIC0.59□□□□□ -2.31
RTCAO00442 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.59□□□□□ -2.31
RTCAO00442 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
RTCAO00442 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
RTCAO00442 RNU6-1082P-201ENST00000364574 107 ntBASIC0.58□□□□□ -2.32
RTCAO00442 RNU6-818P-201ENST00000364837 108 ntBASIC0.58□□□□□ -2.32
RTCAO00442 Y_RNA.357-201ENST00000365487 109 ntBASIC0.58□□□□□ -2.32
RTCAO00442 MIR520F-201ENST00000384824 87 ntBASIC0.58□□□□□ -2.32
RTCAO00442 MIR520H-201ENST00000385126 88 ntBASIC0.58□□□□□ -2.32
RTCAO00442 MIR1257-201ENST00000408490 117 ntBASIC0.58□□□□□ -2.32
RTCAO00442 AC022559.1-201ENST00000520905 205 ntBASIC0.58□□□□□ -2.32
RTCAO00442 SNORA4-201ENST00000584302 138 ntBASIC0.58□□□□□ -2.32
RTCAO00442 MIR6788-201ENST00000618842 66 ntBASIC0.58□□□□□ -2.32
RTCAO00442 SNORD115-2-201ENST00000362842 82 ntBASIC0.57□□□□□ -2.32
RTCAO00442 SNORD115-20-201ENST00000365099 82 ntBASIC0.57□□□□□ -2.32
RTCAO00442 SNORD100-201ENST00000408573 76 ntBASIC0.57□□□□□ -2.32
RTCAO00442 RNA5SP144-201ENST00000410846 116 ntBASIC0.57□□□□□ -2.32
RTCAO00442 RNU6-1086P-201ENST00000410930 100 ntBASIC0.57□□□□□ -2.32
RTCAO00442 RNU5E-9P-201ENST00000411164 104 ntBASIC0.57□□□□□ -2.32
RTCAO00442 AC011195.1-201ENST00000578177 177 ntBASIC0.57□□□□□ -2.32
RTCAO00442 Y_RNA.757-201ENST00000578934 114 ntBASIC0.57□□□□□ -2.32
RTCAO00442 AC090897.1-201ENST00000580909 226 ntBASIC0.57□□□□□ -2.32
RTCAO00442 RNU6-682P-201ENST00000363843 106 ntBASIC0.56□□□□□ -2.32
RTCAO00442 Y_RNA.497-201ENST00000384447 98 ntBASIC0.56□□□□□ -2.32
RTCAO00442 MTATP6P21-201ENST00000440681 189 ntBASIC0.56□□□□□ -2.32
RTCAO00442 SNORA81.3-201ENST00000517283 198 ntBASIC0.56□□□□□ -2.32
RTCAO00442 AC141846.1-201ENST00000568348 142 ntBASIC0.56□□□□□ -2.32
RTCAO00442 DNAJC19P2-201ENST00000593340 302 ntBASIC0.56□□□□□ -2.32
RTCAO00442 MIR6734-201ENST00000621166 68 ntBASIC0.56□□□□□ -2.32
RTCAO00442 MIR6844-201ENST00000637122 62 ntBASIC0.56□□□□□ -2.32
RTCAO00442 RNU6-1336P-201ENST00000383886 109 ntBASIC0.55□□□□□ -2.32
RTCAO00442 RNU6-42P-201ENST00000384165 107 ntBASIC0.55□□□□□ -2.32
RTCAO00442 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms