Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 SUMO2P5-201ENST00000506790 245 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.75□□□□□ -2.69
COL6A5A8TX70 MTND1P36-201ENST00000522384 936 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 AC245297.2-201ENST00000610119 565 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 U6.81-201ENST00000612550 106 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 SNORD116-23-201ENST00000384645 92 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.75□□□□□ -2.69
COL6A5A8TX70 ELOCP4-201ENST00000420090 333 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 AC012306.1-201ENST00000423267 114 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 RNU6-344P-201ENST00000516635 111 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 AC141846.1-201ENST00000568348 142 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 AC005972.2-201ENST00000604690 348 ntBASIC-1.75□□□□□ -2.69
COL6A5A8TX70 RNU6-246P-201ENST00000384702 107 ntBASIC-1.76□□□□□ -2.69
COL6A5A8TX70 MIR16-1-201ENST00000385271 89 ntBASIC-1.76□□□□□ -2.69
COL6A5A8TX70 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.76□□□□□ -2.69
COL6A5A8TX70 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.76□□□□□ -2.69
COL6A5A8TX70 SNORD115-5-201ENST00000363633 82 ntBASIC-1.76□□□□□ -2.69
COL6A5A8TX70 SNORD115-1-201ENST00000364961 82 ntBASIC-1.76□□□□□ -2.69
COL6A5A8TX70 SNORA69-201ENST00000383895 132 ntBASIC-1.76□□□□□ -2.69
COL6A5A8TX70 AC008628.2-201ENST00000502605 298 ntBASIC-1.76□□□□□ -2.69
COL6A5A8TX70 AL133153.1-201ENST00000557756 303 ntBASIC-1.76□□□□□ -2.69
COL6A5A8TX70 MIR3146-201ENST00000580367 79 ntBASIC-1.76□□□□□ -2.69
COL6A5A8TX70 U2.18-201ENST00000622185 84 ntBASIC-1.76□□□□□ -2.69
COL6A5A8TX70 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 RNU6-913P-201ENST00000390913 95 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 MIR548I2-201ENST00000408348 149 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 AC138393.2-201ENST00000414742 246 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 MTND2P6-201ENST00000455337 1030 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 RNU6-377P-201ENST00000515965 102 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 AC027807.2-201ENST00000616099 408 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 U6.42-201ENST00000618440 107 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 RNY1P12-201ENST00000364251 105 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 MIR15A-201ENST00000607334 83 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.77□□□□□ -2.69
COL6A5A8TX70 MTND5P26-201ENST00000426018 1752 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 RNU6-340P-201ENST00000364005 107 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 MTND4P18-201ENST00000447010 465 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-1.78□□□□□ -2.69
COL6A5A8TX70 SNORA27.1-201ENST00000362604 124 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 RNY1P13-201ENST00000365030 105 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 MIR421-201ENST00000365696 85 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 RNU2-39P-201ENST00000410604 198 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 MTATP6P2-201ENST00000603319 678 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 AC008873.1-201ENST00000625051 138 ntBASIC-1.78□□□□□ -2.69
COL6A5A8TX70 AC073415.1-201ENST00000449240 153 ntBASIC-1.79□□□□□ -2.7
COL6A5A8TX70 RNU1-54P-201ENST00000517181 120 ntBASIC-1.79□□□□□ -2.7
COL6A5A8TX70 RNU6-433P-201ENST00000363216 104 ntBASIC-1.79□□□□□ -2.7
COL6A5A8TX70 RNU6-97P-201ENST00000363387 104 ntBASIC-1.79□□□□□ -2.7
COL6A5A8TX70 AC093899.1-201ENST00000457984 376 ntBASIC-1.79□□□□□ -2.7
COL6A5A8TX70 RNU7-195P-201ENST00000458793 62 ntBASIC-1.79□□□□□ -2.7
COL6A5A8TX70 RNU6-762P-201ENST00000517107 102 ntBASIC-1.79□□□□□ -2.7
COL6A5A8TX70 FRG2DP-202ENST00000566967 323 ntBASIC-1.79□□□□□ -2.7
COL6A5A8TX70 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.79□□□□□ -2.7
COL6A5A8TX70 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
COL6A5A8TX70 RNY4P19-201ENST00000362530 96 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 AC119751.4-201ENST00000507498 357 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 MTCYBP4-201ENST00000401524 249 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.8□□□□□ -2.7
COL6A5A8TX70 AC091133.4-201ENST00000511142 308 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 RNU7-79P-201ENST00000516082 62 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 CYP3A54P-201ENST00000566950 75 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 AP000907.4-201ENST00000604143 237 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 AC124303.1-201ENST00000605703 360 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 AL158063.1-201ENST00000615349 536 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 MIR6717-201ENST00000622747 73 ntBASIC-1.8□□□□□ -2.7
COL6A5A8TX70 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 MIR122-201ENST00000385044 85 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 AC018710.1-201ENST00000506509 158 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 RNU7-53P-201ENST00000516705 60 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 AC144568.1-201ENST00000520139 137 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 MTATP6P15-201ENST00000527233 835 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 AC139792.3-201ENST00000623525 224 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 RNU6-407P-201ENST00000365280 104 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 RNU6-422P-201ENST00000384632 107 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 MTND2P18-201ENST00000419962 1030 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 AC109347.2-201ENST00000610220 349 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 AC068137.4-201ENST00000638485 296 ntBASIC-1.81□□□□□ -2.7
COL6A5A8TX70 MIR202-201ENST00000362219 110 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 RNU6-268P-201ENST00000364174 107 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 RNU6-809P-201ENST00000384461 107 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 RNU4-70P-201ENST00000384579 139 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 MIR519A1-201ENST00000385257 85 ntBASIC-1.82□□□□□ -2.7
COL6A5A8TX70 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms