Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 RNU1-17P-201ENST00000363022 152 ntBASIC1.12□□□□□ -2.23
SAA2-SAA4A0A096LPE2 Y_RNA.346-201ENST00000365385 112 ntBASIC1.12□□□□□ -2.23
SAA2-SAA4A0A096LPE2 SNORD38B-201ENST00000384690 67 ntBASIC1.12□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU6-613P-201ENST00000410412 108 ntBASIC1.12□□□□□ -2.23
SAA2-SAA4A0A096LPE2 AL591806.2-201ENST00000433122 173 ntBASIC1.12□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR4303-201ENST00000581299 66 ntBASIC1.12□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR548AE2-201ENST00000583456 67 ntBASIC1.12□□□□□ -2.23
SAA2-SAA4A0A096LPE2 AL359881.1-201ENST00000602916 267 ntBASIC1.12□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR6740-201ENST00000618268 113 ntBASIC1.12□□□□□ -2.23
SAA2-SAA4A0A096LPE2 SNORD38B-202ENST00000625943 69 ntBASIC1.12□□□□□ -2.23
SAA2-SAA4A0A096LPE2 U6.95-201ENST00000636931 70 ntBASIC1.12□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU6-396P-201ENST00000365369 105 ntBASIC1.11□□□□□ -2.23
SAA2-SAA4A0A096LPE2 SNORD26-201ENST00000384147 75 ntBASIC1.11□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU6-429P-201ENST00000384582 108 ntBASIC1.11□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR150-201ENST00000385048 84 ntBASIC1.11□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR764-201ENST00000390811 85 ntBASIC1.11□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU6-205P-201ENST00000390858 107 ntBASIC1.11□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.11□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU11-2P-201ENST00000516898 142 ntBASIC1.11□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR548A1-201ENST00000385041 97 ntBASIC1.1□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MT-TN-201ENST00000387400 73 ntBASIC1.1□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU6-893P-201ENST00000458841 100 ntBASIC1.1□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNA5SP33-201ENST00000516687 98 ntBASIC1.1□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU1-92P-201ENST00000517017 135 ntBASIC1.1□□□□□ -2.23
SAA2-SAA4A0A096LPE2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.1□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR548AI-201ENST00000579940 88 ntBASIC1.1□□□□□ -2.23
SAA2-SAA4A0A096LPE2 AL670379.3-201ENST00000605040 251 ntBASIC1.1□□□□□ -2.23
SAA2-SAA4A0A096LPE2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.1□□□□□ -2.23
SAA2-SAA4A0A096LPE2 AC087741.2-201ENST00000619415 172 ntBASIC1.1□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR7843-201ENST00000622274 79 ntBASIC1.1□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNA5SP327-201ENST00000362494 101 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 Y_RNA.273-201ENST00000364703 102 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU6-1144P-201ENST00000384247 104 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 SNORA18-201ENST00000384416 132 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU6-476P-201ENST00000384726 107 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR563-201ENST00000385080 79 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR758-201ENST00000390227 88 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU6-910P-201ENST00000390844 107 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 Y_RNA.629-201ENST00000411368 105 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 Y_RNA.649-201ENST00000459077 103 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 snoU13.2-201ENST00000459201 104 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR2115-201ENST00000516657 100 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 RNU7-35P-201ENST00000517174 62 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 MIR6129-201ENST00000616087 109 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 SEPT14P17-201ENST00000617978 177 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 AL035470.1-201ENST00000622571 220 ntBASIC1.09□□□□□ -2.23
SAA2-SAA4A0A096LPE2 ZNF209P-201ENST00000593450 2304 ntBASIC1.09□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-834P-201ENST00000362367 110 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-580P-201ENST00000365159 107 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 Y_RNA.354-201ENST00000365448 111 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORA32-201ENST00000384072 121 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 Y_RNA.549-201ENST00000384657 102 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-1237P-201ENST00000384777 107 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR548A3-201ENST00000385297 97 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-1064P-201ENST00000410626 104 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU4-69P-201ENST00000410677 143 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU1-123P-201ENST00000458950 160 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU7-21P-201ENST00000459430 62 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MTND5P34-201ENST00000568888 325 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR4264-201ENST00000583520 66 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 Y_RNA.773-201ENST00000607168 90 ntBASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.08□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR377-201ENST00000362145 69 ntBASIC1.07□□□□□ -2.24
SAA2-SAA4A0A096LPE2 Y_RNA.213-201ENST00000364178 111 ntBASIC1.07□□□□□ -2.24
SAA2-SAA4A0A096LPE2 Y_RNA.344-201ENST00000365381 112 ntBASIC1.07□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR588-201ENST00000384900 83 ntBASIC1.07□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORA17.3-201ENST00000391159 129 ntBASIC1.07□□□□□ -2.24
SAA2-SAA4A0A096LPE2 snoU13.23-201ENST00000458863 104 ntBASIC1.07□□□□□ -2.24
SAA2-SAA4A0A096LPE2 snoU13.21-201ENST00000459368 105 ntBASIC1.07□□□□□ -2.24
SAA2-SAA4A0A096LPE2 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.07□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC036111.3-201ENST00000526389 112 ntBASIC1.07□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC068338.1-201ENST00000565567 176 ntBASIC1.07□□□□□ -2.24
SAA2-SAA4A0A096LPE2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.07□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AL391516.1-201ENST00000554380 2449 ntBASIC1.06□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR30D-201ENST00000362283 70 ntBASIC1.06□□□□□ -2.24
SAA2-SAA4A0A096LPE2 Y_RNA.35-201ENST00000362601 101 ntBASIC1.06□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-215P-201ENST00000365169 102 ntBASIC1.06□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR548D2-201ENST00000384955 97 ntBASIC1.06□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC108210.2-201ENST00000503681 201 ntBASIC1.06□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU7-6P-201ENST00000516845 62 ntBASIC1.06□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC007012.1-201ENST00000567192 175 ntBASIC1.06□□□□□ -2.24
SAA2-SAA4A0A096LPE2 MIR3163-201ENST00000581592 73 ntBASIC1.06□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AL662814.1-201ENST00000617364 121 ntBASIC1.06□□□□□ -2.24
SAA2-SAA4A0A096LPE2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORD115-19-201ENST00000363098 82 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORD115-18-201ENST00000363293 82 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORD115-17-201ENST00000364612 82 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNY1P13-201ENST00000365030 105 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 Y_RNA.362-201ENST00000365518 110 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 SNORD20-201ENST00000384550 80 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC096949.1-201ENST00000412047 152 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU7-62P-201ENST00000458856 62 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC004223.1-201ENST00000479840 271 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU7-79P-201ENST00000516082 62 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 RNU6-589P-201ENST00000516485 107 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC141846.1-201ENST00000568348 142 ntBASIC1.05□□□□□ -2.24
SAA2-SAA4A0A096LPE2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms