Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNY4P36-201ENST00000391116 96 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 MIR1265-201ENST00000408444 86 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 AC108059.2-201ENST00000434626 151 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 RNU6-897P-201ENST00000517135 105 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 MIR5706-201ENST00000579841 80 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 MIR5688-201ENST00000580619 83 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 SNORA70.25-201ENST00000612741 95 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 AL138825.1-201ENST00000618587 192 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 AL606534.2-204ENST00000635008 178 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 MTND4LP32-201ENST00000636111 270 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 AC073869.6-201ENST00000640656 341 ntBASIC-0.33□□□□□ -2.46
USH1CQ9Y6N9 MIR367-201ENST00000362299 68 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 RNA5SP163-201ENST00000410304 99 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 RPL39P25-201ENST00000449384 154 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 RNU6-475P-201ENST00000516073 104 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 RNU6-277P-201ENST00000516272 106 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 MIR3925-201ENST00000584674 77 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 AP001180.6-201ENST00000584918 159 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 RPS29P30-201ENST00000600975 111 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 AC084781.2-201ENST00000615568 161 ntBASIC-0.34□□□□□ -2.46
USH1CQ9Y6N9 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 SNORD113-8-201ENST00000363497 74 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 RNY1P13-201ENST00000365030 105 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 RNU6-46P-201ENST00000383860 107 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 SNORA72.6-201ENST00000384520 129 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 MIR106A-201ENST00000384870 81 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 MT-TL1-201ENST00000386347 75 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 AC096531.1-201ENST00000419107 107 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 PMCHL1-202ENST00000423102 261 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 SNORA20.3-201ENST00000516880 132 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 AL360085.1-201ENST00000604713 532 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 uc_338.28-201ENST00000612082 187 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 AC007485.1-201ENST00000616755 206 ntBASIC-0.35□□□□□ -2.47
USH1CQ9Y6N9 MIR655-201ENST00000362159 97 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 MIR342-201ENST00000362212 99 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 RNA5SP275-201ENST00000363936 118 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 SNORD114-12-201ENST00000365400 75 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 RNU2-55P-201ENST00000411146 174 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 AC244505.6-201ENST00000452829 130 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 MIR4677-201ENST00000584153 80 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 AC091932.4-201ENST00000623386 200 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 MIR6086-201ENST00000638065 55 ntBASIC-0.36□□□□□ -2.47
USH1CQ9Y6N9 MIR302B-201ENST00000362188 73 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 SNORA63.5-201ENST00000363548 123 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 SNORA1-201ENST00000384107 130 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 MIR196A2-201ENST00000385189 110 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 RNA5SP300-201ENST00000391197 107 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 RNA5SP153-201ENST00000516498 76 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 MIR5197-201ENST00000583721 112 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 AL008718.3-201ENST00000610217 321 ntBASIC-0.37□□□□□ -2.47
USH1CQ9Y6N9 SNORD114-28-201ENST00000363610 72 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 RNU6-702P-201ENST00000364982 107 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 SNORA22B-201ENST00000383876 138 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 SNORD115-46-201ENST00000390982 71 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 Z95118.1-201ENST00000421372 247 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 RNU7-161P-201ENST00000517289 62 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 AC040926.1-201ENST00000530195 238 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 MIR4493-201ENST00000584016 73 ntBASIC-0.38□□□□□ -2.47
USH1CQ9Y6N9 SNORA22.1-201ENST00000362701 134 ntBASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 RNU4-90P-201ENST00000362773 141 ntBASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 RNU4-10P-201ENST00000364383 140 ntBASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.39□□□□□ -2.47
USH1CQ9Y6N9 RNU7-80P-201ENST00000459562 61 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 246 ms