Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 SNORD115-21-201ENST00000362963 81 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-14-201ENST00000363090 81 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-13-201ENST00000363358 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-41-201ENST00000363608 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-11-201ENST00000363616 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-5-201ENST00000363633 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-39-201ENST00000363694 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-4-201ENST00000363810 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-16-201ENST00000363887 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-6-201ENST00000363942 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-42-201ENST00000364273 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 Y_RNA.241-201ENST00000364470 117 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-15-201ENST00000364809 81 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-1-201ENST00000364961 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-26-201ENST00000365067 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-10-201ENST00000365073 81 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-43-201ENST00000365503 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-36-201ENST00000365629 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORA27-201ENST00000384323 126 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 MTATP6P21-201ENST00000440681 189 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 RNU6-922P-201ENST00000516753 99 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORA74.3-201ENST00000517108 154 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 AC019176.1-201ENST00000518519 225 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 MIR548AI-201ENST00000579940 88 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 AL357312.1-201ENST00000603879 298 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORD115-40-201ENST00000606510 82 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 AC091932.4-201ENST00000623386 200 ntBASIC1.74□□□□□ -2.13
NR2E3Q9Y5X4 SNORA1.2-201ENST00000365189 134 ntBASIC1.73□□□□□ -2.13
NR2E3Q9Y5X4 SNORD58C-201ENST00000365223 64 ntBASIC1.73□□□□□ -2.13
NR2E3Q9Y5X4 SNORA24-201ENST00000384096 131 ntBASIC1.73□□□□□ -2.13
NR2E3Q9Y5X4 SNORD41-201ENST00000386967 70 ntBASIC1.73□□□□□ -2.13
NR2E3Q9Y5X4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.73□□□□□ -2.13
NR2E3Q9Y5X4 RNU6-998P-201ENST00000515894 101 ntBASIC1.73□□□□□ -2.13
NR2E3Q9Y5X4 RN7SKP19-201ENST00000516016 252 ntBASIC1.73□□□□□ -2.13
NR2E3Q9Y5X4 SNORA18.7-201ENST00000516910 131 ntBASIC1.73□□□□□ -2.13
NR2E3Q9Y5X4 AC090821.2-201ENST00000523552 176 ntBASIC1.73□□□□□ -2.13
NR2E3Q9Y5X4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.73□□□□□ -2.13
NR2E3Q9Y5X4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.73□□□□□ -2.13
NR2E3Q9Y5X4 MIR96-201ENST00000362288 78 ntBASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 RNU6-647P-201ENST00000364243 107 ntBASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 Y_RNA.353-201ENST00000365440 108 ntBASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 Y_RNA.366-201ENST00000365540 102 ntBASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 RPL30P7-201ENST00000479312 323 ntBASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 RNU5E-3P-201ENST00000515913 68 ntBASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 RNU6-113P-201ENST00000516653 101 ntBASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 HSPE1P19-201ENST00000603327 295 ntBASIC1.72□□□□□ -2.13
NR2E3Q9Y5X4 RPS29P24-201ENST00000486345 171 ntBASIC1.71□□□□□ -2.14
NR2E3Q9Y5X4 RNU6-240P-201ENST00000516098 97 ntBASIC1.71□□□□□ -2.14
NR2E3Q9Y5X4 RNU7-43P-201ENST00000516554 64 ntBASIC1.71□□□□□ -2.14
NR2E3Q9Y5X4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.71□□□□□ -2.14
NR2E3Q9Y5X4 MIR151B-201ENST00000584249 96 ntBASIC1.71□□□□□ -2.14
NR2E3Q9Y5X4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
NR2E3Q9Y5X4 RNU1-93P-201ENST00000364704 169 ntBASIC1.7□□□□□ -2.14
NR2E3Q9Y5X4 Y_RNA.370-201ENST00000365589 108 ntBASIC1.7□□□□□ -2.14
NR2E3Q9Y5X4 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
NR2E3Q9Y5X4 MIR570-201ENST00000384917 97 ntBASIC1.7□□□□□ -2.14
NR2E3Q9Y5X4 RNU7-96P-201ENST00000459535 64 ntBASIC1.7□□□□□ -2.14
NR2E3Q9Y5X4 RN7SKP179-201ENST00000516126 217 ntBASIC1.7□□□□□ -2.14
NR2E3Q9Y5X4 RNU6-902P-201ENST00000517212 91 ntBASIC1.7□□□□□ -2.14
NR2E3Q9Y5X4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NR2E3Q9Y5X4 Y_RNA.629-201ENST00000411368 105 ntBASIC1.69□□□□□ -2.14
NR2E3Q9Y5X4 RPS27P16-201ENST00000425758 201 ntBASIC1.69□□□□□ -2.14
NR2E3Q9Y5X4 RPS29P1-201ENST00000465274 159 ntBASIC1.69□□□□□ -2.14
NR2E3Q9Y5X4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.69□□□□□ -2.14
NR2E3Q9Y5X4 MIR6788-201ENST00000618842 66 ntBASIC1.69□□□□□ -2.14
NR2E3Q9Y5X4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.69□□□□□ -2.14
NR2E3Q9Y5X4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
NR2E3Q9Y5X4 Y_RNA.178-201ENST00000363832 102 ntBASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 RNU1-133P-201ENST00000364867 167 ntBASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 RNY1P6-201ENST00000384193 109 ntBASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 MIR520E-201ENST00000384867 87 ntBASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 RNU6-913P-201ENST00000390913 95 ntBASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 SNORD111.1-201ENST00000516421 86 ntBASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 AL512310.8-201ENST00000550183 120 ntBASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 MIR3664-201ENST00000579074 99 ntBASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 MIR4764-201ENST00000580680 88 ntBASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 AL596211.1-201ENST00000569873 2277 ntBASIC1.68□□□□□ -2.14
NR2E3Q9Y5X4 Y_RNA.273-201ENST00000364703 102 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 RNU6-429P-201ENST00000384582 108 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 MIR520C-201ENST00000385005 87 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 SNORA26.6-201ENST00000391256 115 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 RNU2-11P-201ENST00000459191 187 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 RNU7-80P-201ENST00000459562 61 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 AC107297.1-201ENST00000459991 176 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 SNORD33.1-201ENST00000516213 88 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 RNU6-970P-201ENST00000516312 107 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 RNU6-1061P-201ENST00000516530 99 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 AC133485.4-201ENST00000561835 220 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 AC138907.4-201ENST00000570107 226 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 AL359881.1-201ENST00000602916 267 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 MIR4791-201ENST00000607666 84 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 AL137067.1-201ENST00000615933 120 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 AL121890.5-201ENST00000620848 304 ntBASIC1.67□□□□□ -2.14
NR2E3Q9Y5X4 MIR342-201ENST00000362212 99 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms