Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 snoU13.23-201ENST00000458863 104 ntBASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 RNU7-164P-201ENST00000459221 62 ntBASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 RPS29P11-201ENST00000496507 171 ntBASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 RNU7-123P-201ENST00000515911 60 ntBASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 RNY4P20-201ENST00000516678 93 ntBASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 MIR3152-201ENST00000579801 74 ntBASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 MIR3683-201ENST00000580847 82 ntBASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
R3HCC1Q9Y3T6 SNORA22.1-201ENST00000362701 134 ntBASIC1.84□□□□□ -2.11
R3HCC1Q9Y3T6 Y_RNA.298-201ENST00000364960 107 ntBASIC1.84□□□□□ -2.11
R3HCC1Q9Y3T6 Y_RNA.430-201ENST00000384081 110 ntBASIC1.84□□□□□ -2.11
R3HCC1Q9Y3T6 RNU6-1168P-201ENST00000390831 104 ntBASIC1.84□□□□□ -2.11
R3HCC1Q9Y3T6 MIR1263-201ENST00000408324 86 ntBASIC1.84□□□□□ -2.11
R3HCC1Q9Y3T6 RPS3AP1-201ENST00000413190 320 ntBASIC1.84□□□□□ -2.11
R3HCC1Q9Y3T6 AC245047.7-201ENST00000440265 293 ntBASIC1.84□□□□□ -2.11
R3HCC1Q9Y3T6 RNU6-62P-201ENST00000516526 102 ntBASIC1.84□□□□□ -2.11
R3HCC1Q9Y3T6 MIR4524B-201ENST00000581569 115 ntBASIC1.84□□□□□ -2.11
R3HCC1Q9Y3T6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.84□□□□□ -2.11
R3HCC1Q9Y3T6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
R3HCC1Q9Y3T6 MIR103A2-201ENST00000362154 78 ntBASIC1.83□□□□□ -2.12
R3HCC1Q9Y3T6 Y_RNA.171-201ENST00000363760 102 ntBASIC1.83□□□□□ -2.12
R3HCC1Q9Y3T6 MIRLET7F2-201ENST00000385277 83 ntBASIC1.83□□□□□ -2.12
R3HCC1Q9Y3T6 RNA5SP261-201ENST00000410536 106 ntBASIC1.83□□□□□ -2.12
R3HCC1Q9Y3T6 AL512326.2-201ENST00000426359 151 ntBASIC1.83□□□□□ -2.12
R3HCC1Q9Y3T6 SNORA31.2-201ENST00000516019 134 ntBASIC1.83□□□□□ -2.12
R3HCC1Q9Y3T6 Y_RNA.712-201ENST00000517011 92 ntBASIC1.83□□□□□ -2.12
R3HCC1Q9Y3T6 MIR8065-201ENST00000620577 100 ntBASIC1.83□□□□□ -2.12
R3HCC1Q9Y3T6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.82□□□□□ -2.12
R3HCC1Q9Y3T6 SNORA22C-201ENST00000384614 134 ntBASIC1.82□□□□□ -2.12
R3HCC1Q9Y3T6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.82□□□□□ -2.12
R3HCC1Q9Y3T6 RNU6-479P-201ENST00000516348 105 ntBASIC1.82□□□□□ -2.12
R3HCC1Q9Y3T6 AC015712.3-201ENST00000559380 164 ntBASIC1.82□□□□□ -2.12
R3HCC1Q9Y3T6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
R3HCC1Q9Y3T6 AL022718.1-201ENST00000412004 84 ntBASIC1.81□□□□□ -2.12
R3HCC1Q9Y3T6 AC244023.1-201ENST00000426884 112 ntBASIC1.81□□□□□ -2.12
R3HCC1Q9Y3T6 AC022523.2-201ENST00000561045 150 ntBASIC1.81□□□□□ -2.12
R3HCC1Q9Y3T6 AC242498.1-201ENST00000604134 111 ntBASIC1.81□□□□□ -2.12
R3HCC1Q9Y3T6 MIR6516-201ENST00000630554 81 ntBASIC1.81□□□□□ -2.12
R3HCC1Q9Y3T6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.81□□□□□ -2.12
R3HCC1Q9Y3T6 AL161722.3-201ENST00000605789 2983 ntBASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 RNA5SP432-201ENST00000362480 116 ntBASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 RNA5SP190-201ENST00000365222 118 ntBASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 RNU6-1104P-201ENST00000384723 104 ntBASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 RNU6-1154P-201ENST00000391001 104 ntBASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 RNU2-51P-201ENST00000410708 197 ntBASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 RN7SKP179-201ENST00000516126 217 ntBASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 AC004812.1-201ENST00000540773 146 ntBASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 AC025166.1-201ENST00000612411 163 ntBASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 AL353997.5-201ENST00000618886 171 ntBASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 MIR3914-2-201ENST00000637339 95 ntBASIC1.8□□□□□ -2.12
R3HCC1Q9Y3T6 RNU6-654P-201ENST00000364373 107 ntBASIC1.79□□□□□ -2.12
R3HCC1Q9Y3T6 Y_RNA.470-201ENST00000384307 117 ntBASIC1.79□□□□□ -2.12
R3HCC1Q9Y3T6 Y_RNA.528-201ENST00000384575 108 ntBASIC1.79□□□□□ -2.12
R3HCC1Q9Y3T6 SNORD38B-201ENST00000384690 67 ntBASIC1.79□□□□□ -2.12
R3HCC1Q9Y3T6 MIR320A-201ENST00000385302 82 ntBASIC1.79□□□□□ -2.12
R3HCC1Q9Y3T6 SNORD12C-201ENST00000386307 89 ntBASIC1.79□□□□□ -2.12
R3HCC1Q9Y3T6 MIR548I2-201ENST00000408348 149 ntBASIC1.79□□□□□ -2.12
R3HCC1Q9Y3T6 SNORD38B-202ENST00000625943 69 ntBASIC1.79□□□□□ -2.12
R3HCC1Q9Y3T6 RNU6-396P-201ENST00000365369 105 ntBASIC1.78□□□□□ -2.12
R3HCC1Q9Y3T6 MT-TI-201ENST00000387365 69 ntBASIC1.78□□□□□ -2.12
R3HCC1Q9Y3T6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.78□□□□□ -2.12
R3HCC1Q9Y3T6 RNU6-313P-201ENST00000516317 112 ntBASIC1.78□□□□□ -2.12
R3HCC1Q9Y3T6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.78□□□□□ -2.12
R3HCC1Q9Y3T6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.78□□□□□ -2.12
R3HCC1Q9Y3T6 SNORD53B-201ENST00000577887 78 ntBASIC1.78□□□□□ -2.12
R3HCC1Q9Y3T6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 RNA5SP205-201ENST00000364653 136 ntBASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 Y_RNA.531-201ENST00000384589 121 ntBASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 SNORA75.2-201ENST00000391138 150 ntBASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 SNORA75.3-201ENST00000391231 150 ntBASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 RNA5SP136-201ENST00000410906 107 ntBASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 RNU6-893P-201ENST00000458841 100 ntBASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 RNU7-113P-201ENST00000459273 62 ntBASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 RNU11-2P-201ENST00000516898 142 ntBASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 MTND5P18-201ENST00000445624 1801 ntBASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
R3HCC1Q9Y3T6 MIR764-201ENST00000390811 85 ntBASIC1.76□□□□□ -2.13
R3HCC1Q9Y3T6 RNA5SP95-201ENST00000410319 137 ntBASIC1.76□□□□□ -2.13
R3HCC1Q9Y3T6 AC113410.1-201ENST00000505029 247 ntBASIC1.76□□□□□ -2.13
R3HCC1Q9Y3T6 MIR2115-201ENST00000516657 100 ntBASIC1.76□□□□□ -2.13
R3HCC1Q9Y3T6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.76□□□□□ -2.13
R3HCC1Q9Y3T6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.75□□□□□ -2.13
R3HCC1Q9Y3T6 Y_RNA.563-201ENST00000384707 108 ntBASIC1.75□□□□□ -2.13
R3HCC1Q9Y3T6 RNU6-910P-201ENST00000390844 107 ntBASIC1.75□□□□□ -2.13
R3HCC1Q9Y3T6 RNU6-205P-201ENST00000390858 107 ntBASIC1.75□□□□□ -2.13
R3HCC1Q9Y3T6 MIR7974-201ENST00000615835 79 ntBASIC1.75□□□□□ -2.13
R3HCC1Q9Y3T6 SNORD115-2-201ENST00000362842 82 ntBASIC1.74□□□□□ -2.13
R3HCC1Q9Y3T6 RNU1-17P-201ENST00000363022 152 ntBASIC1.74□□□□□ -2.13
R3HCC1Q9Y3T6 SNORD115-20-201ENST00000365099 82 ntBASIC1.74□□□□□ -2.13
R3HCC1Q9Y3T6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.74□□□□□ -2.13
R3HCC1Q9Y3T6 RNU6-735P-201ENST00000410612 107 ntBASIC1.74□□□□□ -2.13
R3HCC1Q9Y3T6 RNU1-98P-201ENST00000458992 160 ntBASIC1.74□□□□□ -2.13
R3HCC1Q9Y3T6 SNORD13-201ENST00000459299 104 ntBASIC1.74□□□□□ -2.13
R3HCC1Q9Y3T6 AC023790.1-201ENST00000482174 347 ntBASIC1.74□□□□□ -2.13
R3HCC1Q9Y3T6 COX6CP6-201ENST00000490840 228 ntBASIC1.74□□□□□ -2.13
R3HCC1Q9Y3T6 SNORD33.1-201ENST00000516213 88 ntBASIC1.74□□□□□ -2.13
R3HCC1Q9Y3T6 SEPT14P17-201ENST00000617978 177 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms