Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC022709.1-201ENST00000615967 87 ntBASIC1.82□□□□□ -2.12
CDK11AQ9UQ88 MTND5P32-201ENST00000560711 1802 ntBASIC1.82□□□□□ -2.12
CDK11AQ9UQ88 Y_RNA.215-201ENST00000364204 112 ntBASIC1.81□□□□□ -2.12
CDK11AQ9UQ88 RNY1P5-201ENST00000383890 115 ntBASIC1.81□□□□□ -2.12
CDK11AQ9UQ88 AC245047.7-201ENST00000440265 293 ntBASIC1.81□□□□□ -2.12
CDK11AQ9UQ88 AC087343.1-201ENST00000477341 475 ntBASIC1.81□□□□□ -2.12
CDK11AQ9UQ88 SCARNA15-202ENST00000516881 127 ntBASIC1.81□□□□□ -2.12
CDK11AQ9UQ88 MTND5P41-201ENST00000517498 206 ntBASIC1.81□□□□□ -2.12
CDK11AQ9UQ88 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDK11AQ9UQ88 Y_RNA.488-201ENST00000384403 102 ntBASIC1.8□□□□□ -2.12
CDK11AQ9UQ88 RNA5SP261-201ENST00000410536 106 ntBASIC1.8□□□□□ -2.12
CDK11AQ9UQ88 RNU6-255P-201ENST00000516957 105 ntBASIC1.8□□□□□ -2.12
CDK11AQ9UQ88 AC091932.4-201ENST00000623386 200 ntBASIC1.8□□□□□ -2.12
CDK11AQ9UQ88 AC027335.2-201ENST00000624030 375 ntBASIC1.8□□□□□ -2.12
CDK11AQ9UQ88 SNORA31.2-201ENST00000516019 134 ntBASIC1.79□□□□□ -2.12
CDK11AQ9UQ88 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.79□□□□□ -2.12
CDK11AQ9UQ88 AL596211.1-201ENST00000569873 2277 ntBASIC1.79□□□□□ -2.12
CDK11AQ9UQ88 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CDK11AQ9UQ88 RNA5SP264-201ENST00000363115 107 ntBASIC1.78□□□□□ -2.12
CDK11AQ9UQ88 Y_RNA.120-201ENST00000363304 110 ntBASIC1.78□□□□□ -2.12
CDK11AQ9UQ88 Y_RNA.343-201ENST00000365354 112 ntBASIC1.78□□□□□ -2.12
CDK11AQ9UQ88 RNU11-2P-201ENST00000516898 142 ntBASIC1.78□□□□□ -2.12
CDK11AQ9UQ88 RNA5SP404-201ENST00000517118 132 ntBASIC1.78□□□□□ -2.12
CDK11AQ9UQ88 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDK11AQ9UQ88 MIR103A2-201ENST00000362154 78 ntBASIC1.77□□□□□ -2.13
CDK11AQ9UQ88 Y_RNA.251-201ENST00000364551 99 ntBASIC1.77□□□□□ -2.13
CDK11AQ9UQ88 Y_RNA.354-201ENST00000365448 111 ntBASIC1.77□□□□□ -2.13
CDK11AQ9UQ88 RPS29P1-201ENST00000465274 159 ntBASIC1.77□□□□□ -2.13
CDK11AQ9UQ88 AC048334.1-201ENST00000477975 159 ntBASIC1.77□□□□□ -2.13
CDK11AQ9UQ88 MIR6788-201ENST00000618842 66 ntBASIC1.77□□□□□ -2.13
CDK11AQ9UQ88 SNORA25.3-201ENST00000363205 127 ntBASIC1.76□□□□□ -2.13
CDK11AQ9UQ88 SNORA25.12-201ENST00000516202 82 ntBASIC1.76□□□□□ -2.13
CDK11AQ9UQ88 SNORA70.22-201ENST00000517160 124 ntBASIC1.76□□□□□ -2.13
CDK11AQ9UQ88 MIR3152-201ENST00000579801 74 ntBASIC1.76□□□□□ -2.13
CDK11AQ9UQ88 MIR548AO-201ENST00000579992 96 ntBASIC1.76□□□□□ -2.13
CDK11AQ9UQ88 RNU7-197P-201ENST00000458836 62 ntBASIC1.75□□□□□ -2.13
CDK11AQ9UQ88 RNU6-1223P-201ENST00000517124 104 ntBASIC1.75□□□□□ -2.13
CDK11AQ9UQ88 MIR151B-201ENST00000584249 96 ntBASIC1.75□□□□□ -2.13
CDK11AQ9UQ88 PRELID3BP2-201ENST00000605362 201 ntBASIC1.75□□□□□ -2.13
CDK11AQ9UQ88 RNU1-124P-201ENST00000363861 145 ntBASIC1.74□□□□□ -2.13
CDK11AQ9UQ88 RNU6-396P-201ENST00000365369 105 ntBASIC1.74□□□□□ -2.13
CDK11AQ9UQ88 SNORA20-201ENST00000384662 132 ntBASIC1.74□□□□□ -2.13
CDK11AQ9UQ88 snoU13.25-201ENST00000458945 104 ntBASIC1.74□□□□□ -2.13
CDK11AQ9UQ88 RNA5SP236-201ENST00000516169 116 ntBASIC1.74□□□□□ -2.13
CDK11AQ9UQ88 RNU6-113P-201ENST00000516653 101 ntBASIC1.74□□□□□ -2.13
CDK11AQ9UQ88 AP003716.2-201ENST00000528260 108 ntBASIC1.74□□□□□ -2.13
CDK11AQ9UQ88 AL020996.3-201ENST00000606617 222 ntBASIC1.74□□□□□ -2.13
CDK11AQ9UQ88 AC011603.4-201ENST00000611325 277 ntBASIC1.74□□□□□ -2.13
CDK11AQ9UQ88 SNORA1.1-201ENST00000364671 133 ntBASIC1.73□□□□□ -2.13
CDK11AQ9UQ88 Y_RNA.506-201ENST00000384494 102 ntBASIC1.73□□□□□ -2.13
CDK11AQ9UQ88 RNU6-913P-201ENST00000390913 95 ntBASIC1.73□□□□□ -2.13
CDK11AQ9UQ88 AL603914.1-201ENST00000401964 204 ntBASIC1.73□□□□□ -2.13
CDK11AQ9UQ88 RPS23P4-201ENST00000487908 423 ntBASIC1.73□□□□□ -2.13
CDK11AQ9UQ88 MIR2115-201ENST00000516657 100 ntBASIC1.73□□□□□ -2.13
CDK11AQ9UQ88 Y_RNA.703-201ENST00000516846 111 ntBASIC1.73□□□□□ -2.13
CDK11AQ9UQ88 MIR8055-201ENST00000610739 97 ntBASIC1.73□□□□□ -2.13
CDK11AQ9UQ88 RNU6-746P-201ENST00000384112 109 ntBASIC1.72□□□□□ -2.13
CDK11AQ9UQ88 RNY1P6-201ENST00000384193 109 ntBASIC1.72□□□□□ -2.13
CDK11AQ9UQ88 SNORA80D-201ENST00000384488 135 ntBASIC1.72□□□□□ -2.13
CDK11AQ9UQ88 MIR569-201ENST00000385228 96 ntBASIC1.72□□□□□ -2.13
CDK11AQ9UQ88 AL392103.1-201ENST00000447000 198 ntBASIC1.72□□□□□ -2.13
CDK11AQ9UQ88 RNU6-893P-201ENST00000458841 100 ntBASIC1.72□□□□□ -2.13
CDK11AQ9UQ88 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.72□□□□□ -2.13
CDK11AQ9UQ88 AP001340.1-201ENST00000624405 217 ntBASIC1.72□□□□□ -2.13
CDK11AQ9UQ88 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CDK11AQ9UQ88 MIR613-201ENST00000385248 95 ntBASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 RNU6-910P-201ENST00000390844 107 ntBASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 RNU6-1319P-201ENST00000390855 104 ntBASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 RNU6-747P-201ENST00000390928 104 ntBASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 RNU6-241P-201ENST00000391148 104 ntBASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 MIR548J-201ENST00000408833 112 ntBASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 RNU6-177P-201ENST00000411257 104 ntBASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 AL591704.2-201ENST00000421658 181 ntBASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 Y_RNA.690-201ENST00000516603 95 ntBASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 AP001328.1-201ENST00000528550 176 ntBASIC1.71□□□□□ -2.14
CDK11AQ9UQ88 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 SNORD38B-201ENST00000384690 67 ntBASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 SNORD12-201ENST00000391002 90 ntBASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 RNU6-460P-201ENST00000391158 108 ntBASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 MIR548M-201ENST00000408260 86 ntBASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 MIR1185-1-201ENST00000408598 86 ntBASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 RPS3AP1-201ENST00000413190 320 ntBASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 Y_RNA.692-201ENST00000516627 105 ntBASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 MIR6515-201ENST00000619843 57 ntBASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 SNORD38B-202ENST00000625943 69 ntBASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 Z97988.1-201ENST00000637697 135 ntBASIC1.7□□□□□ -2.14
CDK11AQ9UQ88 RNY1P11-201ENST00000363759 113 ntBASIC1.69□□□□□ -2.14
CDK11AQ9UQ88 RNU6-915P-201ENST00000364943 103 ntBASIC1.69□□□□□ -2.14
CDK11AQ9UQ88 Y_RNA.420-201ENST00000384043 110 ntBASIC1.69□□□□□ -2.14
CDK11AQ9UQ88 RN7SKP179-201ENST00000516126 217 ntBASIC1.69□□□□□ -2.14
CDK11AQ9UQ88 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.69□□□□□ -2.14
CDK11AQ9UQ88 AP000753.3-201ENST00000604083 169 ntBASIC1.69□□□□□ -2.14
CDK11AQ9UQ88 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.69□□□□□ -2.14
CDK11AQ9UQ88 SEPT14P17-201ENST00000617978 177 ntBASIC1.69□□□□□ -2.14
CDK11AQ9UQ88 AC021613.1-201ENST00000623880 111 ntBASIC1.69□□□□□ -2.14
CDK11AQ9UQ88 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CDK11AQ9UQ88 RNU6-125P-201ENST00000384505 107 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms