Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 AC242498.1-201ENST00000604134 111 ntBASIC0.86□□□□□ -2.27
GTF3C4Q9UKN8 AC134878.1-201ENST00000619901 243 ntBASIC0.86□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-34-201ENST00000362441 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-12-201ENST00000362583 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-29-201ENST00000362834 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-9-201ENST00000362912 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-21-201ENST00000362963 81 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-14-201ENST00000363090 81 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-13-201ENST00000363358 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-41-201ENST00000363608 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-11-201ENST00000363616 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-5-201ENST00000363633 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-39-201ENST00000363694 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-4-201ENST00000363810 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-16-201ENST00000363887 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-6-201ENST00000363942 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-42-201ENST00000364273 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 Y_RNA.240-201ENST00000364469 95 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-15-201ENST00000364809 81 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-1-201ENST00000364961 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-26-201ENST00000365067 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-10-201ENST00000365073 81 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-43-201ENST00000365503 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-36-201ENST00000365629 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 RNU6-1189P-201ENST00000383958 107 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORA24-201ENST00000384096 131 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 RNU6-205P-201ENST00000390858 107 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORA40.5-201ENST00000391061 128 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 RNU7-67P-201ENST00000459003 62 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 RNU2-11P-201ENST00000459191 187 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD116-25-201ENST00000516517 92 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 MIR5197-201ENST00000583721 112 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 AL365205.2-201ENST00000594586 68 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 AC072026.1-201ENST00000605023 201 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 SNORD115-40-201ENST00000606510 82 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 RNU6-94P-201ENST00000607728 107 ntBASIC0.85□□□□□ -2.27
GTF3C4Q9UKN8 Y_RNA.8-201ENST00000362353 102 ntBASIC0.84□□□□□ -2.27
GTF3C4Q9UKN8 RNU4-84P-201ENST00000364200 139 ntBASIC0.84□□□□□ -2.27
GTF3C4Q9UKN8 Y_RNA.785-201ENST00000384290 109 ntBASIC0.84□□□□□ -2.27
GTF3C4Q9UKN8 Y_RNA.537-201ENST00000384626 109 ntBASIC0.84□□□□□ -2.27
GTF3C4Q9UKN8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
GTF3C4Q9UKN8 RNU6-847P-201ENST00000411115 108 ntBASIC0.84□□□□□ -2.27
GTF3C4Q9UKN8 RPS29P24-201ENST00000486345 171 ntBASIC0.84□□□□□ -2.27
GTF3C4Q9UKN8 RNA5SP272-201ENST00000516095 111 ntBASIC0.84□□□□□ -2.27
GTF3C4Q9UKN8 RNU6-1149P-201ENST00000516810 97 ntBASIC0.84□□□□□ -2.27
GTF3C4Q9UKN8 RNU11-2P-201ENST00000516898 142 ntBASIC0.84□□□□□ -2.27
GTF3C4Q9UKN8 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
GTF3C4Q9UKN8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
GTF3C4Q9UKN8 RNU4-16P-201ENST00000364737 141 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 RNU6-1335P-201ENST00000365426 107 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.521-201ENST00000384560 114 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 SNORA26.6-201ENST00000391256 115 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 SNORA79-201ENST00000408376 140 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 AL606490.4-201ENST00000423117 127 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 AC087499.4-201ENST00000448505 178 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 U7.7-201ENST00000459276 60 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 RNU6-998P-201ENST00000515894 101 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 RNU6-794P-201ENST00000517261 64 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 AC025627.3-201ENST00000582078 182 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 MIR8055-201ENST00000610739 97 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 FTX_2.1-201ENST00000618816 94 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 AC091932.4-201ENST00000623386 200 ntBASIC0.83□□□□□ -2.28
GTF3C4Q9UKN8 AL596211.1-201ENST00000569873 2277 ntBASIC0.82□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.52-201ENST00000362760 96 ntBASIC0.82□□□□□ -2.28
GTF3C4Q9UKN8 RNU6-312P-201ENST00000364629 107 ntBASIC0.82□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.351-201ENST00000365436 96 ntBASIC0.82□□□□□ -2.28
GTF3C4Q9UKN8 MIR100-201ENST00000385259 80 ntBASIC0.82□□□□□ -2.28
GTF3C4Q9UKN8 SNORD12C-201ENST00000386307 89 ntBASIC0.82□□□□□ -2.28
GTF3C4Q9UKN8 AC004941.2-201ENST00000427009 228 ntBASIC0.82□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.686-201ENST00000516548 134 ntBASIC0.82□□□□□ -2.28
GTF3C4Q9UKN8 AC036111.3-201ENST00000526389 112 ntBASIC0.82□□□□□ -2.28
GTF3C4Q9UKN8 AL353765.1-201ENST00000605514 183 ntBASIC0.82□□□□□ -2.28
GTF3C4Q9UKN8 AC021753.1-201ENST00000635724 168 ntBASIC0.82□□□□□ -2.28
GTF3C4Q9UKN8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.272-201ENST00000364696 102 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 SNORA1.2-201ENST00000365189 134 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.393-201ENST00000383936 102 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.398-201ENST00000383952 99 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.441-201ENST00000384123 112 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 RNU6-886P-201ENST00000384319 105 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.497-201ENST00000384447 98 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 MIR489-201ENST00000384923 84 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 MIR605-201ENST00000385078 83 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 SNORA26-201ENST00000391286 122 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 AL035398.1-201ENST00000430869 322 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 AC067940.1-201ENST00000458411 300 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.662-201ENST00000516028 97 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 RNU7-121P-201ENST00000516604 62 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 RNU6-1258P-201ENST00000516911 111 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 AC106800.4-201ENST00000614905 153 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 MIR6740-201ENST00000618268 113 ntBASIC0.81□□□□□ -2.28
GTF3C4Q9UKN8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
GTF3C4Q9UKN8 RNU4-11P-201ENST00000365287 132 ntBASIC0.8□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.410-201ENST00000383992 113 ntBASIC0.8□□□□□ -2.28
GTF3C4Q9UKN8 Y_RNA.542-201ENST00000384641 111 ntBASIC0.8□□□□□ -2.28
GTF3C4Q9UKN8 RNU6-1067P-201ENST00000384752 107 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms