Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SNORD38B-202ENST00000625943 69 ntBASIC1.03□□□□□ -2.24
HCN3Q9P1Z3 AL596211.1-201ENST00000569873 2277 ntBASIC1.03□□□□□ -2.25
HCN3Q9P1Z3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
HCN3Q9P1Z3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.02□□□□□ -2.25
HCN3Q9P1Z3 RNA5SP127-201ENST00000411051 133 ntBASIC1.02□□□□□ -2.25
HCN3Q9P1Z3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
HCN3Q9P1Z3 PDCD5P2-201ENST00000507570 312 ntBASIC1.02□□□□□ -2.25
HCN3Q9P1Z3 AP002392.1-201ENST00000537692 208 ntBASIC1.02□□□□□ -2.25
HCN3Q9P1Z3 MIR151B-201ENST00000584249 96 ntBASIC1.02□□□□□ -2.25
HCN3Q9P1Z3 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
HCN3Q9P1Z3 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
HCN3Q9P1Z3 AC012676.2-201ENST00000619258 186 ntBASIC1.02□□□□□ -2.25
HCN3Q9P1Z3 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
HCN3Q9P1Z3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.01□□□□□ -2.25
HCN3Q9P1Z3 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
HCN3Q9P1Z3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.01□□□□□ -2.25
HCN3Q9P1Z3 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
HCN3Q9P1Z3 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
HCN3Q9P1Z3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.01□□□□□ -2.25
HCN3Q9P1Z3 MIR4264-201ENST00000583520 66 ntBASIC1.01□□□□□ -2.25
HCN3Q9P1Z3 AL020996.3-201ENST00000606617 222 ntBASIC1.01□□□□□ -2.25
HCN3Q9P1Z3 MIR8055-201ENST00000610739 97 ntBASIC1.01□□□□□ -2.25
HCN3Q9P1Z3 Y_RNA.168-201ENST00000363740 102 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 RNU6-312P-201ENST00000364629 107 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 RNU6-200P-201ENST00000364743 107 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 RNU6-1336P-201ENST00000383886 109 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 MT-TN-201ENST00000387400 73 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 SNORD89-201ENST00000390981 114 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 MIR548J-201ENST00000408833 112 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 RNU7-45P-201ENST00000459460 63 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 AC107027.2-201ENST00000512197 115 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 RNU6-138P-201ENST00000515952 107 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 MIR4661-201ENST00000582720 75 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 AC072026.1-201ENST00000605023 201 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 AC091932.4-201ENST00000623386 200 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 Z97988.1-201ENST00000637697 135 ntBASIC1□□□□□ -2.25
HCN3Q9P1Z3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1□□□□□ -2.25
HCN3Q9P1Z3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.99□□□□□ -2.25
HCN3Q9P1Z3 Y_RNA.357-201ENST00000365487 109 ntBASIC0.99□□□□□ -2.25
HCN3Q9P1Z3 AC244023.1-201ENST00000426884 112 ntBASIC0.99□□□□□ -2.25
HCN3Q9P1Z3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.99□□□□□ -2.25
HCN3Q9P1Z3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
HCN3Q9P1Z3 AC242498.1-201ENST00000604134 111 ntBASIC0.99□□□□□ -2.25
HCN3Q9P1Z3 AL391516.1-201ENST00000554380 2449 ntBASIC0.98□□□□□ -2.25
HCN3Q9P1Z3 Y_RNA.257-201ENST00000364596 102 ntBASIC0.98□□□□□ -2.25
HCN3Q9P1Z3 RNU1-133P-201ENST00000364867 167 ntBASIC0.98□□□□□ -2.25
HCN3Q9P1Z3 MIR624-201ENST00000385217 97 ntBASIC0.98□□□□□ -2.25
HCN3Q9P1Z3 RPS3AP1-201ENST00000413190 320 ntBASIC0.98□□□□□ -2.25
HCN3Q9P1Z3 MTND5P15-201ENST00000434246 349 ntBASIC0.98□□□□□ -2.25
HCN3Q9P1Z3 RNU7-62P-201ENST00000458856 62 ntBASIC0.98□□□□□ -2.25
HCN3Q9P1Z3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.98□□□□□ -2.25
HCN3Q9P1Z3 MIR377-201ENST00000362145 69 ntBASIC0.97□□□□□ -2.25
HCN3Q9P1Z3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.97□□□□□ -2.25
HCN3Q9P1Z3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.97□□□□□ -2.25
HCN3Q9P1Z3 RNA5SP261-201ENST00000410536 106 ntBASIC0.97□□□□□ -2.25
HCN3Q9P1Z3 RNU6-602P-201ENST00000411155 105 ntBASIC0.97□□□□□ -2.25
HCN3Q9P1Z3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.97□□□□□ -2.25
HCN3Q9P1Z3 RNU6-1149P-201ENST00000516810 97 ntBASIC0.97□□□□□ -2.25
HCN3Q9P1Z3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.97□□□□□ -2.25
HCN3Q9P1Z3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
HCN3Q9P1Z3 Y_RNA.337-201ENST00000365312 102 ntBASIC0.96□□□□□ -2.26
HCN3Q9P1Z3 Y_RNA.374-201ENST00000365606 101 ntBASIC0.96□□□□□ -2.26
HCN3Q9P1Z3 RNU6-768P-201ENST00000384683 107 ntBASIC0.96□□□□□ -2.26
HCN3Q9P1Z3 SNORD83.1-201ENST00000411362 77 ntBASIC0.96□□□□□ -2.26
HCN3Q9P1Z3 snoU13.21-201ENST00000459368 105 ntBASIC0.96□□□□□ -2.26
HCN3Q9P1Z3 RNA5SP255-201ENST00000516370 107 ntBASIC0.96□□□□□ -2.26
HCN3Q9P1Z3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.96□□□□□ -2.26
HCN3Q9P1Z3 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
HCN3Q9P1Z3 MIR6717-201ENST00000622747 73 ntBASIC0.96□□□□□ -2.26
HCN3Q9P1Z3 MIR1-1-201ENST00000362147 71 ntBASIC0.95□□□□□ -2.26
HCN3Q9P1Z3 Y_RNA.29-201ENST00000362570 113 ntBASIC0.95□□□□□ -2.26
HCN3Q9P1Z3 RNU6-597P-201ENST00000365620 102 ntBASIC0.95□□□□□ -2.26
HCN3Q9P1Z3 SNORA20-201ENST00000384662 132 ntBASIC0.95□□□□□ -2.26
HCN3Q9P1Z3 MIR588-201ENST00000384900 83 ntBASIC0.95□□□□□ -2.26
HCN3Q9P1Z3 MIR100-201ENST00000385259 80 ntBASIC0.95□□□□□ -2.26
HCN3Q9P1Z3 U7.7-201ENST00000459276 60 ntBASIC0.95□□□□□ -2.26
HCN3Q9P1Z3 RNU6-861P-201ENST00000516745 106 ntBASIC0.95□□□□□ -2.26
HCN3Q9P1Z3 MIR3152-201ENST00000579801 74 ntBASIC0.95□□□□□ -2.26
HCN3Q9P1Z3 AL136317.1-201ENST00000612653 226 ntBASIC0.95□□□□□ -2.26
HCN3Q9P1Z3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.94□□□□□ -2.26
HCN3Q9P1Z3 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
HCN3Q9P1Z3 RNU6-934P-201ENST00000365154 107 ntBASIC0.94□□□□□ -2.26
HCN3Q9P1Z3 RNU6-580P-201ENST00000365159 107 ntBASIC0.94□□□□□ -2.26
HCN3Q9P1Z3 SNORD12C-201ENST00000386307 89 ntBASIC0.94□□□□□ -2.26
HCN3Q9P1Z3 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
HCN3Q9P1Z3 SNORA81.3-201ENST00000517283 198 ntBASIC0.94□□□□□ -2.26
HCN3Q9P1Z3 MIR6844-201ENST00000637122 62 ntBASIC0.94□□□□□ -2.26
HCN3Q9P1Z3 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
HCN3Q9P1Z3 MTND5P32-201ENST00000560711 1802 ntBASIC0.94□□□□□ -2.26
HCN3Q9P1Z3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.93□□□□□ -2.26
HCN3Q9P1Z3 POLR2J4-204ENST00000418424 324 ntBASIC0.93□□□□□ -2.26
HCN3Q9P1Z3 AC015818.7-201ENST00000428754 109 ntBASIC0.93□□□□□ -2.26
HCN3Q9P1Z3 AC087499.7-201ENST00000441958 109 ntBASIC0.93□□□□□ -2.26
HCN3Q9P1Z3 Y_RNA.662-201ENST00000516028 97 ntBASIC0.93□□□□□ -2.26
HCN3Q9P1Z3 SCARNA15-202ENST00000516881 127 ntBASIC0.93□□□□□ -2.26
HCN3Q9P1Z3 MIR4771-2-201ENST00000577758 74 ntBASIC0.93□□□□□ -2.26
HCN3Q9P1Z3 MIR4771-1-201ENST00000582617 74 ntBASIC0.93□□□□□ -2.26
HCN3Q9P1Z3 MIR6740-201ENST00000618268 113 ntBASIC0.93□□□□□ -2.26
HCN3Q9P1Z3 AC010332.2-201ENST00000613083 1904 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms