Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 AC096720.1-201ENST00000604441 183 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 AC022513.1-201ENST00000624512 117 ntBASIC2.53□□□□□ -2
LMCD1Q9NZU5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
LMCD1Q9NZU5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
LMCD1Q9NZU5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2.01
LMCD1Q9NZU5 RNU6-315P-201ENST00000362666 107 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-2-201ENST00000362842 82 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 Y_RNA.140-201ENST00000363474 103 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-20-201ENST00000365099 82 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 RNU6-424P-201ENST00000384367 105 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 RNA5SP210-201ENST00000391034 120 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 MIR1265-201ENST00000408444 86 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 MIR1267-201ENST00000408723 78 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 SNORA11.4-201ENST00000408823 129 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 RNU7-96P-201ENST00000459535 64 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 MIR5007-201ENST00000583098 95 ntBASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LMCD1Q9NZU5 Y_RNA.470-201ENST00000384307 117 ntBASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 U8.16-201ENST00000391279 133 ntBASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 SNORA26.9-201ENST00000391322 122 ntBASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 UBL5P1-201ENST00000507979 193 ntBASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 AC026271.5-201ENST00000577873 130 ntBASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 MIR548AE2-201ENST00000583456 67 ntBASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 AP000942.3-201ENST00000603702 160 ntBASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 RNU6-86P-201ENST00000606534 107 ntBASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 SNORA28-201ENST00000606769 126 ntBASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 MIR219B-201ENST00000637023 88 ntBASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 AL512310.12-203ENST00000640543 90 ntBASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LMCD1Q9NZU5 RNU6-478P-201ENST00000363904 110 ntBASIC2.5□□□□□ -2.01
LMCD1Q9NZU5 RNU6-613P-201ENST00000410412 108 ntBASIC2.5□□□□□ -2.01
LMCD1Q9NZU5 AL161932.1-201ENST00000437408 146 ntBASIC2.5□□□□□ -2.01
LMCD1Q9NZU5 HSPE1P9-201ENST00000440046 311 ntBASIC2.5□□□□□ -2.01
LMCD1Q9NZU5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.5□□□□□ -2.01
LMCD1Q9NZU5 AC093729.1-201ENST00000513074 128 ntBASIC2.5□□□□□ -2.01
LMCD1Q9NZU5 MIR5094-201ENST00000578766 85 ntBASIC2.5□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-34-201ENST00000362441 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-12-201ENST00000362583 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-29-201ENST00000362834 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-9-201ENST00000362912 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-21-201ENST00000362963 81 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-14-201ENST00000363090 81 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-41-201ENST00000363608 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 RNU6-1244P-201ENST00000363614 108 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-11-201ENST00000363616 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-5-201ENST00000363633 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-39-201ENST00000363694 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 Y_RNA.164-201ENST00000363709 102 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-4-201ENST00000363810 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-6-201ENST00000363942 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-42-201ENST00000364273 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-15-201ENST00000364809 81 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-26-201ENST00000365067 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-10-201ENST00000365073 81 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-43-201ENST00000365503 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SNORD115-36-201ENST00000365629 82 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 MIR519C-201ENST00000385053 87 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 MIR516B2-201ENST00000385190 85 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 RPL31P63-201ENST00000422565 375 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 HMGN2P38-201ENST00000423806 265 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 RNU7-26P-201ENST00000458980 63 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 RNU7-113P-201ENST00000459273 62 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 AC027279.3-201ENST00000625055 122 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 MIR6841-201ENST00000637129 72 ntBASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LMCD1Q9NZU5 Y_RNA.226-201ENST00000364337 114 ntBASIC2.48□□□□□ -2.01
LMCD1Q9NZU5 SNORD77B-201ENST00000391112 67 ntBASIC2.48□□□□□ -2.01
LMCD1Q9NZU5 RNU7-12P-201ENST00000516030 62 ntBASIC2.48□□□□□ -2.01
LMCD1Q9NZU5 RNA5SP168-201ENST00000516642 112 ntBASIC2.48□□□□□ -2.01
LMCD1Q9NZU5 RNU6-958P-201ENST00000516995 106 ntBASIC2.48□□□□□ -2.01
LMCD1Q9NZU5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.48□□□□□ -2.01
LMCD1Q9NZU5 AL442644.1-201ENST00000454390 3105 ntBASIC2.47□□□□□ -2.01
LMCD1Q9NZU5 SNORA38-201ENST00000363946 132 ntBASIC2.47□□□□□ -2.01
LMCD1Q9NZU5 RNU6-1019P-201ENST00000364424 107 ntBASIC2.47□□□□□ -2.01
LMCD1Q9NZU5 RNU6-1307P-201ENST00000391012 103 ntBASIC2.47□□□□□ -2.01
LMCD1Q9NZU5 AL445685.2-201ENST00000422551 342 ntBASIC2.47□□□□□ -2.01
LMCD1Q9NZU5 BX510359.4-201ENST00000423750 193 ntBASIC2.47□□□□□ -2.01
LMCD1Q9NZU5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LMCD1Q9NZU5 MIR4498-201ENST00000577599 66 ntBASIC2.47□□□□□ -2.01
LMCD1Q9NZU5 AC020891.4-201ENST00000605745 93 ntBASIC2.47□□□□□ -2.01
LMCD1Q9NZU5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.47□□□□□ -2.01
LMCD1Q9NZU5 ZNF355P-201ENST00000427301 3216 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 AL596028.1-201ENST00000326971 197 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 RNU1-58P-201ENST00000362413 163 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 Y_RNA.57-201ENST00000362806 113 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 SNORA64-201ENST00000384674 134 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 U8.13-201ENST00000390842 128 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 AC093850.1-201ENST00000454121 251 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 RNU7-67P-201ENST00000459003 62 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 RNU6-917P-201ENST00000516294 104 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 RNA5SP33-201ENST00000516687 98 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 RNU6-295P-201ENST00000516901 104 ntBASIC2.46□□□□□ -2.02
LMCD1Q9NZU5 AC005786.1-201ENST00000588553 154 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 219.7 ms