Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
NLGN3Q9NZ94 AC244023.1-201ENST00000426884 112 ntBASIC0.83□□□□□ -2.28
NLGN3Q9NZ94 AL035398.1-201ENST00000430869 322 ntBASIC0.83□□□□□ -2.28
NLGN3Q9NZ94 RNU7-96P-201ENST00000459535 64 ntBASIC0.83□□□□□ -2.28
NLGN3Q9NZ94 MRPS18CP4-201ENST00000535821 231 ntBASIC0.83□□□□□ -2.28
NLGN3Q9NZ94 AC242498.1-201ENST00000604134 111 ntBASIC0.83□□□□□ -2.28
NLGN3Q9NZ94 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
NLGN3Q9NZ94 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.83□□□□□ -2.28
NLGN3Q9NZ94 SNORA2B-201ENST00000384583 137 ntBASIC0.82□□□□□ -2.28
NLGN3Q9NZ94 RNU6-205P-201ENST00000390858 107 ntBASIC0.82□□□□□ -2.28
NLGN3Q9NZ94 RNU2-11P-201ENST00000459191 187 ntBASIC0.82□□□□□ -2.28
NLGN3Q9NZ94 snoU13.21-201ENST00000459368 105 ntBASIC0.82□□□□□ -2.28
NLGN3Q9NZ94 PDCD5P2-201ENST00000507570 312 ntBASIC0.82□□□□□ -2.28
NLGN3Q9NZ94 RNU6-138P-201ENST00000515952 107 ntBASIC0.82□□□□□ -2.28
NLGN3Q9NZ94 SNORD116-25-201ENST00000516517 92 ntBASIC0.82□□□□□ -2.28
NLGN3Q9NZ94 Z97988.1-201ENST00000637697 135 ntBASIC0.82□□□□□ -2.28
NLGN3Q9NZ94 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
NLGN3Q9NZ94 MIR342-201ENST00000362212 99 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 Y_RNA.168-201ENST00000363740 102 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 Y_RNA.233-201ENST00000364407 101 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 SNORD113.3-201ENST00000364630 78 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 RNU6-1335P-201ENST00000365426 107 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 Y_RNA.476-201ENST00000384347 108 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 MT-TN-201ENST00000387400 73 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 MIR548I3-201ENST00000408378 149 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 AC006461.1-201ENST00000412637 326 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 SEPT7P4-201ENST00000437076 306 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 Y_RNA.644-201ENST00000459006 113 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 RNU7-45P-201ENST00000459460 63 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 RNA5SP436-201ENST00000516020 115 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 Y_RNA.674-201ENST00000516362 113 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 RNU7-53P-201ENST00000516705 60 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 uc_338.6-201ENST00000613544 171 ntBASIC0.81□□□□□ -2.28
NLGN3Q9NZ94 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 MIR377-201ENST00000362145 69 ntBASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 Y_RNA.36-201ENST00000362602 112 ntBASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 RNU6-200P-201ENST00000364743 107 ntBASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 RNU6-580P-201ENST00000365159 107 ntBASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 Y_RNA.552-201ENST00000384665 112 ntBASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 SNORA26.6-201ENST00000391256 115 ntBASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 MIR942-201ENST00000401111 86 ntBASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 SCARNA15-202ENST00000516881 127 ntBASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 MIR4431-201ENST00000579990 94 ntBASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 AC091932.4-201ENST00000623386 200 ntBASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.8□□□□□ -2.28
NLGN3Q9NZ94 Y_RNA.351-201ENST00000365436 96 ntBASIC0.79□□□□□ -2.28
NLGN3Q9NZ94 Y_RNA.515-201ENST00000384535 112 ntBASIC0.79□□□□□ -2.28
NLGN3Q9NZ94 SNORD111-201ENST00000408139 94 ntBASIC0.79□□□□□ -2.28
NLGN3Q9NZ94 RNU6-602P-201ENST00000411155 105 ntBASIC0.79□□□□□ -2.28
NLGN3Q9NZ94 RNU2-64P-201ENST00000411315 191 ntBASIC0.79□□□□□ -2.28
NLGN3Q9NZ94 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.79□□□□□ -2.28
NLGN3Q9NZ94 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
NLGN3Q9NZ94 RNA5SP255-201ENST00000516370 107 ntBASIC0.79□□□□□ -2.28
NLGN3Q9NZ94 MIR4264-201ENST00000583520 66 ntBASIC0.79□□□□□ -2.28
NLGN3Q9NZ94 RNU6-369P-201ENST00000362515 102 ntBASIC0.78□□□□□ -2.28
NLGN3Q9NZ94 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
NLGN3Q9NZ94 RNU6-597P-201ENST00000365620 102 ntBASIC0.78□□□□□ -2.28
NLGN3Q9NZ94 RNU6-768P-201ENST00000384683 107 ntBASIC0.78□□□□□ -2.28
NLGN3Q9NZ94 MIR624-201ENST00000385217 97 ntBASIC0.78□□□□□ -2.28
NLGN3Q9NZ94 RNA5SP127-201ENST00000411051 133 ntBASIC0.78□□□□□ -2.28
NLGN3Q9NZ94 RNU5E-9P-201ENST00000411164 104 ntBASIC0.78□□□□□ -2.28
NLGN3Q9NZ94 MIR4714-201ENST00000580728 77 ntBASIC0.78□□□□□ -2.28
NLGN3Q9NZ94 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.78□□□□□ -2.28
NLGN3Q9NZ94 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.78□□□□□ -2.28
NLGN3Q9NZ94 MIR6740-201ENST00000618268 113 ntBASIC0.78□□□□□ -2.28
NLGN3Q9NZ94 SNORA1.1-201ENST00000364671 133 ntBASIC0.77□□□□□ -2.29
NLGN3Q9NZ94 Y_RNA.393-201ENST00000383936 102 ntBASIC0.77□□□□□ -2.29
NLGN3Q9NZ94 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
NLGN3Q9NZ94 RNU6-1149P-201ENST00000516810 97 ntBASIC0.77□□□□□ -2.29
NLGN3Q9NZ94 AP002392.1-201ENST00000537692 208 ntBASIC0.77□□□□□ -2.29
NLGN3Q9NZ94 AP000753.3-201ENST00000604083 169 ntBASIC0.77□□□□□ -2.29
NLGN3Q9NZ94 AL596211.1-201ENST00000569873 2277 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 RNU6-682P-201ENST00000363843 106 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 RNU6-1082P-201ENST00000364574 107 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 Y_RNA.257-201ENST00000364596 102 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 RNU6-994P-201ENST00000410507 111 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 Y_RNA.793-201ENST00000411222 111 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 RPS3AP1-201ENST00000413190 320 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 AC015818.7-201ENST00000428754 109 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 FABP5P4-201ENST00000437203 171 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 AC087499.7-201ENST00000441958 109 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 AC133485.1-201ENST00000567176 124 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 AC138907.6-201ENST00000568401 126 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 AC072026.1-201ENST00000605023 201 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 MIR6717-201ENST00000622747 73 ntBASIC0.76□□□□□ -2.29
NLGN3Q9NZ94 MTND5P32-201ENST00000560711 1802 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 SNORA25.7-201ENST00000364375 127 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 RNU6-312P-201ENST00000364629 107 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 Y_RNA.521-201ENST00000384560 114 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 SNORD38B-201ENST00000384690 67 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 MIR605-201ENST00000385078 83 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 SNORD89-201ENST00000390981 114 ntBASIC0.75□□□□□ -2.29
NLGN3Q9NZ94 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms