Protein–RNA interactions for Protein: Q9NY46

SCN3A, Sodium channel protein type 3 subunit alpha, humanhuman

Predictions only

Length 2,000 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3AQ9NY46 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.71□□□□□ -2.52
SCN3AQ9NY46 RPS29P25-201ENST00000481709 171 ntBASIC-0.71□□□□□ -2.52
SCN3AQ9NY46 RNU6-415P-201ENST00000516252 97 ntBASIC-0.71□□□□□ -2.52
SCN3AQ9NY46 RNU7-35P-201ENST00000517174 62 ntBASIC-0.71□□□□□ -2.52
SCN3AQ9NY46 MIR3681-201ENST00000580089 72 ntBASIC-0.71□□□□□ -2.52
SCN3AQ9NY46 AC011373.1-201ENST00000607270 237 ntBASIC-0.71□□□□□ -2.52
SCN3AQ9NY46 AC011476.5-201ENST00000615594 130 ntBASIC-0.71□□□□□ -2.52
SCN3AQ9NY46 AC078883.4-201ENST00000623218 367 ntBASIC-0.71□□□□□ -2.52
SCN3AQ9NY46 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.72□□□□□ -2.52
SCN3AQ9NY46 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.72□□□□□ -2.52
SCN3AQ9NY46 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.72□□□□□ -2.52
SCN3AQ9NY46 MTATP6P23-201ENST00000440153 476 ntBASIC-0.72□□□□□ -2.52
SCN3AQ9NY46 SNORD77.4-201ENST00000516158 81 ntBASIC-0.72□□□□□ -2.52
SCN3AQ9NY46 SCARNA17-201ENST00000516183 144 ntBASIC-0.72□□□□□ -2.52
SCN3AQ9NY46 AC141846.1-201ENST00000568348 142 ntBASIC-0.72□□□□□ -2.52
SCN3AQ9NY46 MIR198-201ENST00000637333 62 ntBASIC-0.72□□□□□ -2.52
SCN3AQ9NY46 RNA5SP245-201ENST00000364239 121 ntBASIC-0.72□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.72□□□□□ -2.53
SCN3AQ9NY46 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.72□□□□□ -2.53
SCN3AQ9NY46 AC099799.1-201ENST00000439809 192 ntBASIC-0.72□□□□□ -2.53
SCN3AQ9NY46 RNU6-531P-201ENST00000516694 104 ntBASIC-0.72□□□□□ -2.53
SCN3AQ9NY46 RNU7-30P-201ENST00000516835 62 ntBASIC-0.72□□□□□ -2.53
SCN3AQ9NY46 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.72□□□□□ -2.53
SCN3AQ9NY46 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.72□□□□□ -2.53
SCN3AQ9NY46 AC069503.3-201ENST00000618674 145 ntBASIC-0.72□□□□□ -2.53
SCN3AQ9NY46 AC091932.4-201ENST00000623386 200 ntBASIC-0.72□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.73□□□□□ -2.53
SCN3AQ9NY46 SNORA22B-201ENST00000383876 138 ntBASIC-0.73□□□□□ -2.53
SCN3AQ9NY46 RNU6-308P-201ENST00000390957 107 ntBASIC-0.73□□□□□ -2.53
SCN3AQ9NY46 PMCHL1-202ENST00000423102 261 ntBASIC-0.73□□□□□ -2.53
SCN3AQ9NY46 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.73□□□□□ -2.53
SCN3AQ9NY46 SPINT5P-201ENST00000448174 155 ntBASIC-0.73□□□□□ -2.53
SCN3AQ9NY46 RNU7-169P-201ENST00000459456 61 ntBASIC-0.73□□□□□ -2.53
SCN3AQ9NY46 MIR4760-201ENST00000585040 80 ntBASIC-0.73□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 RNU6-429P-201ENST00000384582 108 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 SNORA3B-201ENST00000391305 131 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 AC107399.1-201ENST00000451226 265 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 RNU7-104P-201ENST00000459398 79 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 U8.20-201ENST00000459445 131 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 AC007012.1-201ENST00000567192 175 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 MIR548H5-201ENST00000580314 60 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 AC245008.1-201ENST00000608123 476 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 SNORA25.7-201ENST00000364375 127 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 SNORD83B-201ENST00000386745 93 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 RNU6-383P-201ENST00000410864 94 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 MTND1P14-201ENST00000427400 950 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 VN1R91P-201ENST00000594377 169 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 AC093726.3-201ENST00000637588 150 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 AC099654.14-201ENST00000638599 341 ntBASIC-0.74□□□□□ -2.53
SCN3AQ9NY46 RNY4P14-201ENST00000363656 96 ntBASIC-0.75□□□□□ -2.53
SCN3AQ9NY46 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.75□□□□□ -2.53
SCN3AQ9NY46 SNORD61-201ENST00000384252 73 ntBASIC-0.75□□□□□ -2.53
SCN3AQ9NY46 RNU6-831P-201ENST00000384548 107 ntBASIC-0.75□□□□□ -2.53
SCN3AQ9NY46 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.75□□□□□ -2.53
SCN3AQ9NY46 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.75□□□□□ -2.53
SCN3AQ9NY46 RNU6-893P-201ENST00000458841 100 ntBASIC-0.75□□□□□ -2.53
SCN3AQ9NY46 SNORD2-201ENST00000459163 69 ntBASIC-0.75□□□□□ -2.53
SCN3AQ9NY46 RNU7-80P-201ENST00000459562 61 ntBASIC-0.75□□□□□ -2.53
SCN3AQ9NY46 AL365205.2-201ENST00000594586 68 ntBASIC-0.75□□□□□ -2.53
SCN3AQ9NY46 U2.1-201ENST00000618978 145 ntBASIC-0.75□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 RNY1P7-201ENST00000384743 110 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 MIR626-201ENST00000385032 94 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 AC097635.1-201ENST00000450678 155 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 RNU6-506P-201ENST00000516553 94 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 RNU6-264P-201ENST00000517134 104 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 AL121655.1-201ENST00000605811 308 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 RNU7-10P-201ENST00000607194 63 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 MIR655-201ENST00000362159 97 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 RNU6-291P-201ENST00000384720 107 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 RNU6-764P-201ENST00000516396 105 ntBASIC-0.76□□□□□ -2.53
SCN3AQ9NY46 MIR20A-201ENST00000362279 71 ntBASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 RNU6-490P-201ENST00000362985 107 ntBASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 AC113139.1-201ENST00000605049 239 ntBASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 RNU6-763P-201ENST00000390865 106 ntBASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 AC006210.1-201ENST00000424882 111 ntBASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 RNU7-110P-201ENST00000516891 62 ntBASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 MIR376A1-201ENST00000616574 68 ntBASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 AL138825.1-201ENST00000618587 192 ntBASIC-0.77□□□□□ -2.53
SCN3AQ9NY46 RNA5SP205-201ENST00000364653 136 ntBASIC-0.78□□□□□ -2.53
SCN3AQ9NY46 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms