Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 AC244098.3-201ENST00000424803 96 ntBASIC0.67□□□□□ -2.3
RPF1Q9H9Y2 RNU7-45P-201ENST00000459460 63 ntBASIC0.67□□□□□ -2.3
RPF1Q9H9Y2 COX6CP6-201ENST00000490840 228 ntBASIC0.67□□□□□ -2.3
RPF1Q9H9Y2 MIR4744-201ENST00000581563 82 ntBASIC0.67□□□□□ -2.3
RPF1Q9H9Y2 RNU2-4P-201ENST00000606190 192 ntBASIC0.67□□□□□ -2.3
RPF1Q9H9Y2 SNORD38B-202ENST00000625943 69 ntBASIC0.67□□□□□ -2.3
RPF1Q9H9Y2 AC099654.10-201ENST00000640395 161 ntBASIC0.67□□□□□ -2.3
RPF1Q9H9Y2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 SNORD114-26-201ENST00000363543 72 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 RNU6-103P-201ENST00000363686 107 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 SNORA1.1-201ENST00000364671 133 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 Y_RNA.393-201ENST00000383936 102 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 Y_RNA.556-201ENST00000384677 113 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 AL118496.2-201ENST00000448300 230 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 MIR4771-2-201ENST00000577758 74 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 AC011195.1-201ENST00000578177 177 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 MIR4308-201ENST00000580634 81 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 MIR4771-1-201ENST00000582617 74 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 AC020891.4-201ENST00000605745 93 ntBASIC0.66□□□□□ -2.3
RPF1Q9H9Y2 Y_RNA.20-201ENST00000362479 113 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 RNU6-923P-201ENST00000364753 107 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.350-201ENST00000365409 98 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 SNORD12C-201ENST00000386307 89 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 RNU6-578P-201ENST00000390980 103 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 SNORA26.6-201ENST00000391256 115 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.626-201ENST00000411288 95 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 AL121914.1-201ENST00000450188 156 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 MIR3128-201ENST00000581957 66 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 RN7SL793P-201ENST00000583259 296 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 MIR5197-201ENST00000583721 112 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 AC010332.2-201ENST00000613083 1904 ntBASIC0.65□□□□□ -2.31
RPF1Q9H9Y2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.351-201ENST00000365436 96 ntBASIC0.64□□□□□ -2.31
RPF1Q9H9Y2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.542-201ENST00000384641 111 ntBASIC0.64□□□□□ -2.31
RPF1Q9H9Y2 MIR588-201ENST00000384900 83 ntBASIC0.64□□□□□ -2.31
RPF1Q9H9Y2 MIR7-2-201ENST00000384970 110 ntBASIC0.64□□□□□ -2.31
RPF1Q9H9Y2 RNU1-119P-201ENST00000391122 165 ntBASIC0.64□□□□□ -2.31
RPF1Q9H9Y2 MIR1302-3-201ENST00000408128 138 ntBASIC0.64□□□□□ -2.31
RPF1Q9H9Y2 MTND3P2-201ENST00000438452 342 ntBASIC0.64□□□□□ -2.31
RPF1Q9H9Y2 AL365205.2-201ENST00000594586 68 ntBASIC0.64□□□□□ -2.31
RPF1Q9H9Y2 AC062037.2-201ENST00000610137 73 ntBASIC0.64□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.60-201ENST00000362831 98 ntBASIC0.63□□□□□ -2.31
RPF1Q9H9Y2 RNU6-978P-201ENST00000364371 103 ntBASIC0.63□□□□□ -2.31
RPF1Q9H9Y2 RNY1P4-201ENST00000384595 115 ntBASIC0.63□□□□□ -2.31
RPF1Q9H9Y2 SNORA79-201ENST00000408376 140 ntBASIC0.63□□□□□ -2.31
RPF1Q9H9Y2 snoU13.2-201ENST00000459201 104 ntBASIC0.63□□□□□ -2.31
RPF1Q9H9Y2 MIR4804-201ENST00000581683 73 ntBASIC0.63□□□□□ -2.31
RPF1Q9H9Y2 MIR4503-201ENST00000582187 83 ntBASIC0.63□□□□□ -2.31
RPF1Q9H9Y2 MIR4719-201ENST00000585233 84 ntBASIC0.63□□□□□ -2.31
RPF1Q9H9Y2 MIR6717-201ENST00000622747 73 ntBASIC0.63□□□□□ -2.31
RPF1Q9H9Y2 RNU6-1292P-201ENST00000383856 107 ntBASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 RNY1P8-201ENST00000383970 114 ntBASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 RNU6-574P-201ENST00000384265 107 ntBASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 MIR520F-201ENST00000384824 87 ntBASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 MIR520H-201ENST00000385126 88 ntBASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 RNU6-1165P-201ENST00000410119 107 ntBASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.618-201ENST00000410949 107 ntBASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 SEPT7P4-201ENST00000437076 306 ntBASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 RNU6-977P-201ENST00000516411 103 ntBASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 MIR4676-201ENST00000583078 72 ntBASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 AC091932.4-201ENST00000623386 200 ntBASIC0.62□□□□□ -2.31
RPF1Q9H9Y2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 RNU6-597P-201ENST00000365620 102 ntBASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.571-201ENST00000384753 98 ntBASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 MIR563-201ENST00000385080 79 ntBASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 MIR936-201ENST00000401264 98 ntBASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.797-201ENST00000515977 94 ntBASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 RNU6-111P-201ENST00000517179 105 ntBASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 MIR378D2-201ENST00000580636 98 ntBASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 U4.1-201ENST00000620349 87 ntBASIC0.61□□□□□ -2.31
RPF1Q9H9Y2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
RPF1Q9H9Y2 MIR302B-201ENST00000362188 73 ntBASIC0.6□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.193-201ENST00000363979 102 ntBASIC0.6□□□□□ -2.31
RPF1Q9H9Y2 MIR573-201ENST00000384964 99 ntBASIC0.6□□□□□ -2.31
RPF1Q9H9Y2 RNA5SP222-201ENST00000411039 105 ntBASIC0.6□□□□□ -2.31
RPF1Q9H9Y2 RNU7-56P-201ENST00000458744 62 ntBASIC0.6□□□□□ -2.31
RPF1Q9H9Y2 SNORD116-25-201ENST00000516517 92 ntBASIC0.6□□□□□ -2.31
RPF1Q9H9Y2 AL596211.1-201ENST00000569873 2277 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 MIR30D-201ENST00000362283 70 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.121-201ENST00000363309 113 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.182-201ENST00000363880 111 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.307-201ENST00000365022 117 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.447-201ENST00000384184 113 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 Y_RNA.478-201ENST00000384358 107 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 MIR18B-201ENST00000454574 71 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 RNU6-1023P-201ENST00000516137 106 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
RPF1Q9H9Y2 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 303 ms