Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SNORD12C-201ENST00000386307 89 ntBASIC0.58□□□□□ -2.32
RNF41Q9H4P4 RNU6-578P-201ENST00000390980 103 ntBASIC0.58□□□□□ -2.32
RNF41Q9H4P4 RNU1-119P-201ENST00000391122 165 ntBASIC0.58□□□□□ -2.32
RNF41Q9H4P4 MIR548I3-201ENST00000408378 149 ntBASIC0.58□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.618-201ENST00000410949 107 ntBASIC0.58□□□□□ -2.32
RNF41Q9H4P4 RNU7-62P-201ENST00000458856 62 ntBASIC0.58□□□□□ -2.32
RNF41Q9H4P4 snoU13.18-201ENST00000459483 104 ntBASIC0.58□□□□□ -2.32
RNF41Q9H4P4 MIR4804-201ENST00000581683 73 ntBASIC0.58□□□□□ -2.32
RNF41Q9H4P4 MIR5197-201ENST00000583721 112 ntBASIC0.58□□□□□ -2.32
RNF41Q9H4P4 SNORD27-201ENST00000363981 72 ntBASIC0.57□□□□□ -2.32
RNF41Q9H4P4 SNORA1.1-201ENST00000364671 133 ntBASIC0.57□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.308-201ENST00000365043 101 ntBASIC0.57□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.351-201ENST00000365436 96 ntBASIC0.57□□□□□ -2.32
RNF41Q9H4P4 MIR588-201ENST00000384900 83 ntBASIC0.57□□□□□ -2.32
RNF41Q9H4P4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.626-201ENST00000411288 95 ntBASIC0.57□□□□□ -2.32
RNF41Q9H4P4 RNU7-56P-201ENST00000458744 62 ntBASIC0.57□□□□□ -2.32
RNF41Q9H4P4 RNU7-45P-201ENST00000459460 63 ntBASIC0.57□□□□□ -2.32
RNF41Q9H4P4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.57□□□□□ -2.32
RNF41Q9H4P4 MIR3128-201ENST00000581957 66 ntBASIC0.57□□□□□ -2.32
RNF41Q9H4P4 MIR6717-201ENST00000622747 73 ntBASIC0.57□□□□□ -2.32
RNF41Q9H4P4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.7-201ENST00000362352 102 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.350-201ENST00000365409 98 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.477-201ENST00000384352 108 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 RNU6-493P-201ENST00000391321 108 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 MIR18B-201ENST00000454574 71 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
RNF41Q9H4P4 MIR4771-2-201ENST00000577758 74 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 AC011195.1-201ENST00000578177 177 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 MIR4503-201ENST00000582187 83 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 MIR4771-1-201ENST00000582617 74 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 MIR4676-201ENST00000583078 72 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 RNU2-4P-201ENST00000606190 192 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 AC062037.2-201ENST00000610137 73 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 AC099654.10-201ENST00000640395 161 ntBASIC0.56□□□□□ -2.32
RNF41Q9H4P4 MIR30D-201ENST00000362283 70 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.65-201ENST00000362846 100 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.121-201ENST00000363309 113 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 RNY1-201ENST00000364228 113 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.478-201ENST00000384358 107 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 RNU6-1165P-201ENST00000410119 107 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 AL121914.1-201ENST00000450188 156 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 SCARNA15-202ENST00000516881 127 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 MIR378D2-201ENST00000580636 98 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 AC010332.2-201ENST00000613083 1904 ntBASIC0.55□□□□□ -2.32
RNF41Q9H4P4 MIR342-201ENST00000362212 99 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 RNU6-923P-201ENST00000364753 107 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.430-201ENST00000384081 110 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.571-201ENST00000384753 98 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 MIR573-201ENST00000384964 99 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 RNU6-177P-201ENST00000411257 104 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 MTND3P2-201ENST00000438452 342 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 RNU6-977P-201ENST00000516411 103 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 RNU6-229P-201ENST00000516614 102 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.54□□□□□ -2.32
RNF41Q9H4P4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.54□□□□□ -2.32
RNF41Q9H4P4 MIR6515-201ENST00000619843 57 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 U4.1-201ENST00000620349 87 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 AC091932.4-201ENST00000623386 200 ntBASIC0.54□□□□□ -2.32
RNF41Q9H4P4 Y_RNA.193-201ENST00000363979 102 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 MIR520F-201ENST00000384824 87 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 MIR520H-201ENST00000385126 88 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 RNU6-1319P-201ENST00000390855 104 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 RNU6-747P-201ENST00000390928 104 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 RNU6-241P-201ENST00000391148 104 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 MIR1302-3-201ENST00000408128 138 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 SNORA79-201ENST00000408376 140 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 AL118496.2-201ENST00000448300 230 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.53□□□□□ -2.32
RNF41Q9H4P4 RNU7-80P-201ENST00000459562 61 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 RNU6-111P-201ENST00000517179 105 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.53□□□□□ -2.32
RNF41Q9H4P4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.52□□□□□ -2.33
RNF41Q9H4P4 Y_RNA.60-201ENST00000362831 98 ntBASIC0.52□□□□□ -2.33
RNF41Q9H4P4 RNU6-597P-201ENST00000365620 102 ntBASIC0.52□□□□□ -2.33
RNF41Q9H4P4 Y_RNA.447-201ENST00000384184 113 ntBASIC0.52□□□□□ -2.33
RNF41Q9H4P4 MIR936-201ENST00000401264 98 ntBASIC0.52□□□□□ -2.33
RNF41Q9H4P4 RNA5SP436-201ENST00000516020 115 ntBASIC0.52□□□□□ -2.33
RNF41Q9H4P4 RNU6-1023P-201ENST00000516137 106 ntBASIC0.52□□□□□ -2.33
RNF41Q9H4P4 SNORD116-25-201ENST00000516517 92 ntBASIC0.52□□□□□ -2.33
RNF41Q9H4P4 MRPS18CP4-201ENST00000535821 231 ntBASIC0.52□□□□□ -2.33
RNF41Q9H4P4 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
RNF41Q9H4P4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
RNF41Q9H4P4 RNY1P8-201ENST00000383970 114 ntBASIC0.51□□□□□ -2.33
RNF41Q9H4P4 MIR125B2-201ENST00000385128 89 ntBASIC0.51□□□□□ -2.33
RNF41Q9H4P4 RNU6-918P-201ENST00000391219 106 ntBASIC0.51□□□□□ -2.33
RNF41Q9H4P4 RNU7-185P-201ENST00000459215 60 ntBASIC0.51□□□□□ -2.33
RNF41Q9H4P4 Y_RNA.797-201ENST00000515977 94 ntBASIC0.51□□□□□ -2.33
RNF41Q9H4P4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.51□□□□□ -2.33
RNF41Q9H4P4 MIR4711-201ENST00000578274 70 ntBASIC0.51□□□□□ -2.33
RNF41Q9H4P4 AC008608.1-201ENST00000603910 127 ntBASIC0.51□□□□□ -2.33
RNF41Q9H4P4 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
RNF41Q9H4P4 MIR6841-201ENST00000637129 72 ntBASIC0.51□□□□□ -2.33
RNF41Q9H4P4 MIR302B-201ENST00000362188 73 ntBASIC0.5□□□□□ -2.33
RNF41Q9H4P4 RNU6-275P-201ENST00000364910 107 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms