Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNU6-493P-201ENST00000391321 108 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 SNORA79-201ENST00000408376 140 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 MIR1827-201ENST00000408549 66 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 RNU6-994P-201ENST00000410507 111 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.57□□□□□ -2.32
NXF3Q9H4D5 AC244023.1-201ENST00000426884 112 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 RNU6-998P-201ENST00000515894 101 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 MIR4744-201ENST00000581563 82 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 AC242498.1-201ENST00000604134 111 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 AC062037.2-201ENST00000610137 73 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 U4.1-201ENST00000620349 87 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 MIR342-201ENST00000362212 99 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.36-201ENST00000362602 112 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.65-201ENST00000362846 100 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 RNU6-923P-201ENST00000364753 107 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.350-201ENST00000365409 98 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 SNORD38B-201ENST00000384690 67 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 SNORD83.1-201ENST00000411362 77 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 RPS26P5-201ENST00000418544 335 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.56□□□□□ -2.32
NXF3Q9H4D5 MTND3P2-201ENST00000438452 342 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 AL118496.2-201ENST00000448300 230 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 RNU7-45P-201ENST00000459460 63 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 SNORD38B-202ENST00000625943 69 ntBASIC0.56□□□□□ -2.32
NXF3Q9H4D5 MIR1-1-201ENST00000362147 71 ntBASIC0.55□□□□□ -2.32
NXF3Q9H4D5 RNU6-369P-201ENST00000362515 102 ntBASIC0.55□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.60-201ENST00000362831 98 ntBASIC0.55□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.121-201ENST00000363309 113 ntBASIC0.55□□□□□ -2.32
NXF3Q9H4D5 RNU6-1292P-201ENST00000383856 107 ntBASIC0.55□□□□□ -2.32
NXF3Q9H4D5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
NXF3Q9H4D5 SNORD99-201ENST00000408612 74 ntBASIC0.55□□□□□ -2.32
NXF3Q9H4D5 COX6CP6-201ENST00000490840 228 ntBASIC0.55□□□□□ -2.32
NXF3Q9H4D5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.55□□□□□ -2.32
NXF3Q9H4D5 MIR3128-201ENST00000581957 66 ntBASIC0.55□□□□□ -2.32
NXF3Q9H4D5 AL365205.2-201ENST00000594586 68 ntBASIC0.55□□□□□ -2.32
NXF3Q9H4D5 AL353621.2-201ENST00000605340 133 ntBASIC0.55□□□□□ -2.32
NXF3Q9H4D5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.7-201ENST00000362352 102 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 RNY1P4-201ENST00000384595 115 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 RNU6-578P-201ENST00000390980 103 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 MIR548I3-201ENST00000408378 149 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.618-201ENST00000410949 107 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.626-201ENST00000411288 95 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 RNU2-11P-201ENST00000459191 187 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 RNU6-1023P-201ENST00000516137 106 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 RNU4-71P-201ENST00000516258 113 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 MIR4308-201ENST00000580634 81 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 MIR3129-201ENST00000581095 76 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 MIR4503-201ENST00000582187 83 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 RNU2-4P-201ENST00000606190 192 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 MIR6740-201ENST00000618268 113 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
NXF3Q9H4D5 AL589743.1-201ENST00000551932 2712 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 RNU6-978P-201ENST00000364371 103 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 SNORA1.1-201ENST00000364671 133 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 RNU6-702P-201ENST00000364982 107 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 RNU6-934P-201ENST00000365154 107 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 RNU6-597P-201ENST00000365620 102 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 RNY1P8-201ENST00000383970 114 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 RNU6-196P-201ENST00000384315 107 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 RNU6-602P-201ENST00000411155 105 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 AL121914.1-201ENST00000450188 156 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 RNU7-62P-201ENST00000458856 62 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
NXF3Q9H4D5 MIR5197-201ENST00000583721 112 ntBASIC0.53□□□□□ -2.32
NXF3Q9H4D5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
NXF3Q9H4D5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
NXF3Q9H4D5 Y_RNA.193-201ENST00000363979 102 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 Y_RNA.351-201ENST00000365436 96 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
NXF3Q9H4D5 RNU6-1336P-201ENST00000383886 109 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 Y_RNA.452-201ENST00000384202 108 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 MIR7-2-201ENST00000384970 110 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 SNORD12C-201ENST00000386307 89 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 SNORD105-201ENST00000386910 85 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 SNORA26.6-201ENST00000391256 115 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 RNU7-80P-201ENST00000459562 61 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 SNORD116-25-201ENST00000516517 92 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 RNA5SP121-201ENST00000516537 101 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 MIR378D2-201ENST00000580636 98 ntBASIC0.52□□□□□ -2.33
NXF3Q9H4D5 Y_RNA.307-201ENST00000365022 117 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 Y_RNA.447-201ENST00000384184 113 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 Y_RNA.571-201ENST00000384753 98 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 SEPT7P4-201ENST00000437076 306 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 MIR18B-201ENST00000454574 71 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 snoU13.2-201ENST00000459201 104 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 Y_RNA.797-201ENST00000515977 94 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 RNU6-111P-201ENST00000517179 105 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.51□□□□□ -2.33
NXF3Q9H4D5 MIR4771-2-201ENST00000577758 74 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 MIR4771-1-201ENST00000582617 74 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 AC020891.4-201ENST00000605745 93 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 AC010332.2-201ENST00000613083 1904 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 MIR6779-201ENST00000617283 64 ntBASIC0.51□□□□□ -2.33
NXF3Q9H4D5 MIR302B-201ENST00000362188 73 ntBASIC0.5□□□□□ -2.33
NXF3Q9H4D5 SNORD114-23-201ENST00000363536 72 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms