Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MIR520F-201ENST00000384824 87 ntBASIC0.64□□□□□ -2.31
UBQLN3Q9H347 RNU6-493P-201ENST00000391321 108 ntBASIC0.64□□□□□ -2.31
UBQLN3Q9H347 RNU6-1190P-201ENST00000410811 104 ntBASIC0.64□□□□□ -2.31
UBQLN3Q9H347 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
UBQLN3Q9H347 RNU6-998P-201ENST00000515894 101 ntBASIC0.64□□□□□ -2.31
UBQLN3Q9H347 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
UBQLN3Q9H347 AC097639.2-201ENST00000603159 172 ntBASIC0.64□□□□□ -2.31
UBQLN3Q9H347 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
UBQLN3Q9H347 RNU6-923P-201ENST00000364753 107 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.307-201ENST00000365022 117 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.447-201ENST00000384184 113 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.452-201ENST00000384202 108 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 MIR588-201ENST00000384900 83 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
UBQLN3Q9H347 SNORD58.1-201ENST00000391313 66 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.626-201ENST00000411288 95 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 AC244098.3-201ENST00000424803 96 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 MTND5P15-201ENST00000434246 349 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 AL121914.1-201ENST00000450188 156 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 MIR3149-201ENST00000584629 83 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 AL162730.1-201ENST00000605734 292 ntBASIC0.63□□□□□ -2.31
UBQLN3Q9H347 AC010332.2-201ENST00000613083 1904 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 RNU6-369P-201ENST00000362515 102 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.144-201ENST00000363521 113 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 RNU6-103P-201ENST00000363686 107 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 RNY1-201ENST00000364228 113 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.478-201ENST00000384358 107 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 MIR520H-201ENST00000385126 88 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 RNU6-602P-201ENST00000411155 105 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 RNU6-1023P-201ENST00000516137 106 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 RNU6-111P-201ENST00000517179 105 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 RNU2-4P-201ENST00000606190 192 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 MIR6740-201ENST00000618268 113 ntBASIC0.62□□□□□ -2.31
UBQLN3Q9H347 SNORA20.1-201ENST00000364790 130 ntBASIC0.61□□□□□ -2.31
UBQLN3Q9H347 SNORA36.2-201ENST00000384004 127 ntBASIC0.61□□□□□ -2.31
UBQLN3Q9H347 RNU6-463P-201ENST00000384340 107 ntBASIC0.61□□□□□ -2.31
UBQLN3Q9H347 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
UBQLN3Q9H347 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.61□□□□□ -2.31
UBQLN3Q9H347 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.61□□□□□ -2.31
UBQLN3Q9H347 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.61□□□□□ -2.31
UBQLN3Q9H347 MIR4308-201ENST00000580634 81 ntBASIC0.61□□□□□ -2.31
UBQLN3Q9H347 MIR4744-201ENST00000581563 82 ntBASIC0.61□□□□□ -2.31
UBQLN3Q9H347 MIR4676-201ENST00000583078 72 ntBASIC0.61□□□□□ -2.31
UBQLN3Q9H347 uc_338.6-201ENST00000613544 171 ntBASIC0.61□□□□□ -2.31
UBQLN3Q9H347 MIR6515-201ENST00000619843 57 ntBASIC0.61□□□□□ -2.31
UBQLN3Q9H347 MIR376A2-201ENST00000636782 80 ntBASIC0.61□□□□□ -2.31
UBQLN3Q9H347 RNU1-133P-201ENST00000364867 167 ntBASIC0.6□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.542-201ENST00000384641 111 ntBASIC0.6□□□□□ -2.31
UBQLN3Q9H347 SNORD12C-201ENST00000386307 89 ntBASIC0.6□□□□□ -2.31
UBQLN3Q9H347 SEPT7P4-201ENST00000437076 306 ntBASIC0.6□□□□□ -2.31
UBQLN3Q9H347 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.6□□□□□ -2.31
UBQLN3Q9H347 RNU7-45P-201ENST00000459460 63 ntBASIC0.6□□□□□ -2.31
UBQLN3Q9H347 RNA5SP436-201ENST00000516020 115 ntBASIC0.6□□□□□ -2.31
UBQLN3Q9H347 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
UBQLN3Q9H347 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
UBQLN3Q9H347 AL590095.2-201ENST00000604136 117 ntBASIC0.6□□□□□ -2.31
UBQLN3Q9H347 AC020891.4-201ENST00000605745 93 ntBASIC0.6□□□□□ -2.31
UBQLN3Q9H347 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
UBQLN3Q9H347 RNU6-578P-201ENST00000390980 103 ntBASIC0.59□□□□□ -2.31
UBQLN3Q9H347 RNU6-1165P-201ENST00000410119 107 ntBASIC0.59□□□□□ -2.31
UBQLN3Q9H347 RNU4-43P-201ENST00000410628 137 ntBASIC0.59□□□□□ -2.31
UBQLN3Q9H347 Y_RNA.618-201ENST00000410949 107 ntBASIC0.59□□□□□ -2.31
UBQLN3Q9H347 snoU13.2-201ENST00000459201 104 ntBASIC0.59□□□□□ -2.31
UBQLN3Q9H347 RNU7-80P-201ENST00000459562 61 ntBASIC0.59□□□□□ -2.31
UBQLN3Q9H347 RNU4-71P-201ENST00000516258 113 ntBASIC0.59□□□□□ -2.31
UBQLN3Q9H347 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
UBQLN3Q9H347 MIR4804-201ENST00000581683 73 ntBASIC0.59□□□□□ -2.31
UBQLN3Q9H347 AL596211.1-201ENST00000569873 2277 ntBASIC0.59□□□□□ -2.32
UBQLN3Q9H347 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
UBQLN3Q9H347 Y_RNA.182-201ENST00000363880 111 ntBASIC0.58□□□□□ -2.32
UBQLN3Q9H347 Y_RNA.571-201ENST00000384753 98 ntBASIC0.58□□□□□ -2.32
UBQLN3Q9H347 MIR18B-201ENST00000454574 71 ntBASIC0.58□□□□□ -2.32
UBQLN3Q9H347 Y_RNA.797-201ENST00000515977 94 ntBASIC0.58□□□□□ -2.32
UBQLN3Q9H347 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
UBQLN3Q9H347 MIR5197-201ENST00000583721 112 ntBASIC0.58□□□□□ -2.32
UBQLN3Q9H347 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.58□□□□□ -2.32
UBQLN3Q9H347 PVT1_3.1-201ENST00000620853 95 ntBASIC0.58□□□□□ -2.32
UBQLN3Q9H347 Y_RNA.454-201ENST00000384224 113 ntBASIC0.57□□□□□ -2.32
UBQLN3Q9H347 RNU4-70P-201ENST00000384579 139 ntBASIC0.57□□□□□ -2.32
UBQLN3Q9H347 MIR573-201ENST00000384964 99 ntBASIC0.57□□□□□ -2.32
UBQLN3Q9H347 RNA5SP261-201ENST00000410536 106 ntBASIC0.57□□□□□ -2.32
UBQLN3Q9H347 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
UBQLN3Q9H347 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
UBQLN3Q9H347 RNU7-70P-201ENST00000516941 66 ntBASIC0.57□□□□□ -2.32
UBQLN3Q9H347 MIR6717-201ENST00000622747 73 ntBASIC0.57□□□□□ -2.32
UBQLN3Q9H347 Y_RNA.121-201ENST00000363309 113 ntBASIC0.56□□□□□ -2.32
UBQLN3Q9H347 RNU6-1292P-201ENST00000383856 107 ntBASIC0.56□□□□□ -2.32
UBQLN3Q9H347 RNU6-364P-201ENST00000384387 107 ntBASIC0.56□□□□□ -2.32
UBQLN3Q9H347 Y_RNA.540-201ENST00000384638 111 ntBASIC0.56□□□□□ -2.32
UBQLN3Q9H347 RNU6-918P-201ENST00000391219 106 ntBASIC0.56□□□□□ -2.32
UBQLN3Q9H347 MIR938-201ENST00000401216 83 ntBASIC0.56□□□□□ -2.32
UBQLN3Q9H347 RNU7-56P-201ENST00000458744 62 ntBASIC0.56□□□□□ -2.32
UBQLN3Q9H347 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.56□□□□□ -2.32
UBQLN3Q9H347 SNORD116-25-201ENST00000516517 92 ntBASIC0.56□□□□□ -2.32
UBQLN3Q9H347 MIR378D2-201ENST00000580636 98 ntBASIC0.56□□□□□ -2.32
UBQLN3Q9H347 AL365205.2-201ENST00000594586 68 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms