Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RNU6-483P-201ENST00000384088 108 ntBASIC-1.12□□□□□ -2.59
TRIM4Q9C037 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.12□□□□□ -2.59
TRIM4Q9C037 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.12□□□□□ -2.59
TRIM4Q9C037 AP000533.3-201ENST00000447704 118 ntBASIC-1.12□□□□□ -2.59
TRIM4Q9C037 AC023449.1-201ENST00000454464 154 ntBASIC-1.12□□□□□ -2.59
TRIM4Q9C037 SNORD22.1-201ENST00000516331 125 ntBASIC-1.12□□□□□ -2.59
TRIM4Q9C037 MIR4423-201ENST00000580922 80 ntBASIC-1.12□□□□□ -2.59
TRIM4Q9C037 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.12□□□□□ -2.59
TRIM4Q9C037 AC011476.5-201ENST00000615594 130 ntBASIC-1.12□□□□□ -2.59
TRIM4Q9C037 MIR6851-201ENST00000617060 67 ntBASIC-1.12□□□□□ -2.59
TRIM4Q9C037 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.13□□□□□ -2.59
TRIM4Q9C037 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.13□□□□□ -2.59
TRIM4Q9C037 AC024067.1-201ENST00000426199 223 ntBASIC-1.13□□□□□ -2.59
TRIM4Q9C037 RNA5SP484-201ENST00000458857 111 ntBASIC-1.13□□□□□ -2.59
TRIM4Q9C037 RNU6-693P-201ENST00000516134 107 ntBASIC-1.13□□□□□ -2.59
TRIM4Q9C037 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.13□□□□□ -2.59
TRIM4Q9C037 RNU2-31P-201ENST00000516954 155 ntBASIC-1.13□□□□□ -2.59
TRIM4Q9C037 RNY3P3-201ENST00000363816 102 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 RNU6-702P-201ENST00000364982 107 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 RNU6-431P-201ENST00000383874 107 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 RNU6-780P-201ENST00000391030 104 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.14□□□□□ -2.59
TRIM4Q9C037 RNU6-531P-201ENST00000516694 104 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 AP000676.1-201ENST00000533307 52 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 MIR4473-201ENST00000583731 91 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 AL356055.1-201ENST00000602528 446 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 AC090617.10-201ENST00000624308 134 ntBASIC-1.14□□□□□ -2.59
TRIM4Q9C037 MIR342-201ENST00000362212 99 ntBASIC-1.15□□□□□ -2.59
TRIM4Q9C037 RNA5SP403-201ENST00000363598 108 ntBASIC-1.15□□□□□ -2.59
TRIM4Q9C037 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.15□□□□□ -2.59
TRIM4Q9C037 MIR548A2-201ENST00000384956 97 ntBASIC-1.15□□□□□ -2.59
TRIM4Q9C037 SNORD78.2-201ENST00000391076 69 ntBASIC-1.15□□□□□ -2.59
TRIM4Q9C037 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.15□□□□□ -2.59
TRIM4Q9C037 RNA5SP261-201ENST00000410536 106 ntBASIC-1.15□□□□□ -2.59
TRIM4Q9C037 RNU2-14P-201ENST00000411053 191 ntBASIC-1.15□□□□□ -2.59
TRIM4Q9C037 DEFB131E-201ENST00000532329 154 ntBASIC-1.15□□□□□ -2.59
TRIM4Q9C037 AC093424.1-201ENST00000604999 338 ntBASIC-1.15□□□□□ -2.59
TRIM4Q9C037 AC124864.2-201ENST00000624736 186 ntBASIC-1.15□□□□□ -2.59
TRIM4Q9C037 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.16□□□□□ -2.6
TRIM4Q9C037 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.16□□□□□ -2.6
TRIM4Q9C037 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.16□□□□□ -2.6
TRIM4Q9C037 RNY3P4-201ENST00000384428 101 ntBASIC-1.16□□□□□ -2.6
TRIM4Q9C037 RNU6-831P-201ENST00000384548 107 ntBASIC-1.16□□□□□ -2.6
TRIM4Q9C037 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.16□□□□□ -2.6
TRIM4Q9C037 SNORA13-201ENST00000458790 133 ntBASIC-1.16□□□□□ -2.6
TRIM4Q9C037 snoU13.13-201ENST00000458842 104 ntBASIC-1.16□□□□□ -2.6
TRIM4Q9C037 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.16□□□□□ -2.6
TRIM4Q9C037 MIR4790-201ENST00000577799 79 ntBASIC-1.16□□□□□ -2.6
TRIM4Q9C037 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.16□□□□□ -2.6
TRIM4Q9C037 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 RNU6-865P-201ENST00000364772 107 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 MIR518B-201ENST00000385127 83 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 SNORA69.1-201ENST00000390904 137 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 RNU6-706P-201ENST00000517229 104 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 MIR4659A-201ENST00000580269 81 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 MIR4306-201ENST00000583390 91 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 MIR382-201ENST00000637119 76 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 MTND5P26-201ENST00000426018 1752 ntBASIC-1.17□□□□□ -2.6
TRIM4Q9C037 RNU6-502P-201ENST00000362419 108 ntBASIC-1.18□□□□□ -2.6
TRIM4Q9C037 SNORD81.1-201ENST00000363064 77 ntBASIC-1.18□□□□□ -2.6
TRIM4Q9C037 RNU4-58P-201ENST00000363192 141 ntBASIC-1.18□□□□□ -2.6
TRIM4Q9C037 RNU6-99P-201ENST00000364721 107 ntBASIC-1.18□□□□□ -2.6
TRIM4Q9C037 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.18□□□□□ -2.6
TRIM4Q9C037 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.18□□□□□ -2.6
TRIM4Q9C037 MTND5P5-201ENST00000503764 376 ntBASIC-1.18□□□□□ -2.6
TRIM4Q9C037 AC021146.9-201ENST00000512503 156 ntBASIC-1.18□□□□□ -2.6
TRIM4Q9C037 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.18□□□□□ -2.6
TRIM4Q9C037 MIR302B-201ENST00000362188 73 ntBASIC-1.19□□□□□ -2.6
TRIM4Q9C037 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.19□□□□□ -2.6
TRIM4Q9C037 SNORA72.4-201ENST00000384174 132 ntBASIC-1.19□□□□□ -2.6
TRIM4Q9C037 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.19□□□□□ -2.6
TRIM4Q9C037 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.19□□□□□ -2.6
TRIM4Q9C037 AC019235.1-201ENST00000503847 207 ntBASIC-1.19□□□□□ -2.6
TRIM4Q9C037 snoU83B.1-201ENST00000517136 88 ntBASIC-1.19□□□□□ -2.6
TRIM4Q9C037 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.19□□□□□ -2.6
TRIM4Q9C037 MIR3145-201ENST00000580727 82 ntBASIC-1.19□□□□□ -2.6
TRIM4Q9C037 MIR5704-201ENST00000584029 77 ntBASIC-1.19□□□□□ -2.6
TRIM4Q9C037 AL021707.8-201ENST00000609428 183 ntBASIC-1.19□□□□□ -2.6
TRIM4Q9C037 RNY1P13-201ENST00000365030 105 ntBASIC-1.2□□□□□ -2.6
TRIM4Q9C037 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.2□□□□□ -2.6
TRIM4Q9C037 SNORD61-201ENST00000384252 73 ntBASIC-1.2□□□□□ -2.6
TRIM4Q9C037 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.2□□□□□ -2.6
TRIM4Q9C037 AC009161.1-201ENST00000417306 376 ntBASIC-1.2□□□□□ -2.6
TRIM4Q9C037 RNU6-175P-201ENST00000516896 107 ntBASIC-1.2□□□□□ -2.6
TRIM4Q9C037 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.2□□□□□ -2.6
TRIM4Q9C037 AC119751.7-201ENST00000600494 245 ntBASIC-1.2□□□□□ -2.6
TRIM4Q9C037 AL049861.1-201ENST00000603130 150 ntBASIC-1.2□□□□□ -2.6
TRIM4Q9C037 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.21□□□□□ -2.6
TRIM4Q9C037 SNORD114-29-201ENST00000364819 70 ntBASIC-1.21□□□□□ -2.6
TRIM4Q9C037 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.21□□□□□ -2.6
TRIM4Q9C037 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.21□□□□□ -2.6
TRIM4Q9C037 SNORD24-201ENST00000383884 75 ntBASIC-1.21□□□□□ -2.6
TRIM4Q9C037 MIR626-201ENST00000385032 94 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms