Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 SNORD38B-202ENST00000625943 69 ntBASIC0.8□□□□□ -2.28
CCDC28BQ9BUN5 RNY1P10-201ENST00000363268 113 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 RNU6-654P-201ENST00000364373 107 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 Y_RNA.327-201ENST00000365201 102 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 Y_RNA.354-201ENST00000365448 111 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 RNU6-125P-201ENST00000384505 107 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 MTND5P15-201ENST00000434246 349 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 TRMT112P2-201ENST00000512910 132 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 MIR3671-201ENST00000580455 88 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 MIR4781-201ENST00000585250 76 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 MIR342-201ENST00000362212 99 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 RNU1-133P-201ENST00000364867 167 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 Y_RNA.430-201ENST00000384081 110 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 MIR100-201ENST00000385259 80 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 RNU5E-9P-201ENST00000411164 104 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 MIR3152-201ENST00000579801 74 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 RNU6-818P-201ENST00000364837 108 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 SNORA2B-201ENST00000384583 137 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1319P-201ENST00000390855 104 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-747P-201ENST00000390928 104 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-241P-201ENST00000391148 104 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 SNORA26.6-201ENST00000391256 115 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-602P-201ENST00000411155 105 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-177P-201ENST00000411257 104 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU2-64P-201ENST00000411315 191 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RPS3AP1-201ENST00000413190 320 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 AC090844.1-201ENST00000422019 156 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 AC244023.1-201ENST00000426884 112 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 SNORD124-201ENST00000459577 104 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1149P-201ENST00000516810 97 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 AC023827.1-201ENST00000569247 97 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 DNAJC19P2-201ENST00000593340 302 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 AC242498.1-201ENST00000604134 111 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 MIR6717-201ENST00000622747 73 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 MIR6844-201ENST00000637122 62 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 AL596211.1-201ENST00000569873 2277 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 MIR942-201ENST00000401111 86 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-321P-201ENST00000410912 106 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 AC108059.2-201ENST00000434626 151 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 AC067940.1-201ENST00000458411 300 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-893P-201ENST00000458841 100 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 AC091895.1-201ENST00000624494 256 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 MTND5P32-201ENST00000560711 1802 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.52-201ENST00000362760 96 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1082P-201ENST00000364574 107 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.272-201ENST00000364696 102 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 SNORA20-201ENST00000384662 132 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 RNA5SP95-201ENST00000410319 137 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 HMGN1P33-201ENST00000432945 451 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 U7.7-201ENST00000459276 60 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 ACA64.5-201ENST00000516207 127 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 AC090425.1-201ENST00000610007 140 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 AL136317.1-201ENST00000612653 226 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 FTX_2.1-201ENST00000618816 94 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.164-201ENST00000363709 102 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-53P-201ENST00000365367 106 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-205P-201ENST00000390858 107 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-994P-201ENST00000410507 111 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1190P-201ENST00000410811 104 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 MTATP6P21-201ENST00000440681 189 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU7-62P-201ENST00000458856 62 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 PDCD5P2-201ENST00000507570 312 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.676-201ENST00000516393 96 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1110P-201ENST00000516462 101 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 AC098479.1-201ENST00000609225 154 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 AC021613.1-201ENST00000623880 111 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.4-201ENST00000362333 112 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1336P-201ENST00000383886 109 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.580-201ENST00000391004 95 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 MIR1827-201ENST00000408549 66 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 snoU13.2-201ENST00000459201 104 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 RNA5SP236-201ENST00000516169 116 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 RNA5SP255-201ENST00000516370 107 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 MIR4698-201ENST00000577795 80 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 AC025627.3-201ENST00000582078 182 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-94P-201ENST00000607728 107 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 AC011603.4-201ENST00000611325 277 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.270-201ENST00000364693 104 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-392P-201ENST00000364926 101 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 RNY1P6-201ENST00000384193 109 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.497-201ENST00000384447 98 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 MIR563-201ENST00000385080 79 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 SNORD37.2-201ENST00000391075 66 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-588P-201ENST00000410281 105 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-394P-201ENST00000410735 107 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 MIR18B-201ENST00000454574 71 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 MIR6841-201ENST00000637129 72 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms