Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 SNORD38B-202ENST00000625943 69 ntBASIC0.8□□□□□ -2.28
CCDC28BQ9BUN5 RNY1P10-201ENST00000363268 113 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 RNU6-654P-201ENST00000364373 107 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 Y_RNA.327-201ENST00000365201 102 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 Y_RNA.354-201ENST00000365448 111 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 RNU6-125P-201ENST00000384505 107 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 MTND5P15-201ENST00000434246 349 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 TRMT112P2-201ENST00000512910 132 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 MIR3671-201ENST00000580455 88 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 MIR4781-201ENST00000585250 76 ntBASIC0.79□□□□□ -2.28
CCDC28BQ9BUN5 MIR342-201ENST00000362212 99 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 RNU1-133P-201ENST00000364867 167 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 Y_RNA.430-201ENST00000384081 110 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 MIR100-201ENST00000385259 80 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 RNU5E-9P-201ENST00000411164 104 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 MIR3152-201ENST00000579801 74 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
CCDC28BQ9BUN5 RNU6-818P-201ENST00000364837 108 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 SNORA2B-201ENST00000384583 137 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1319P-201ENST00000390855 104 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-747P-201ENST00000390928 104 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-241P-201ENST00000391148 104 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 SNORA26.6-201ENST00000391256 115 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-602P-201ENST00000411155 105 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-177P-201ENST00000411257 104 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU2-64P-201ENST00000411315 191 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RPS3AP1-201ENST00000413190 320 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 AC090844.1-201ENST00000422019 156 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 AC244023.1-201ENST00000426884 112 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 SNORD124-201ENST00000459577 104 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1149P-201ENST00000516810 97 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 AC023827.1-201ENST00000569247 97 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 DNAJC19P2-201ENST00000593340 302 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 AC242498.1-201ENST00000604134 111 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 MIR6717-201ENST00000622747 73 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 MIR6844-201ENST00000637122 62 ntBASIC0.77□□□□□ -2.29
CCDC28BQ9BUN5 AL596211.1-201ENST00000569873 2277 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 HSBP1P2-201ENST00000299671 229 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 MIR942-201ENST00000401111 86 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-321P-201ENST00000410912 106 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 AC108059.2-201ENST00000434626 151 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 AC067940.1-201ENST00000458411 300 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-893P-201ENST00000458841 100 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 AC091895.1-201ENST00000624494 256 ntBASIC0.76□□□□□ -2.29
CCDC28BQ9BUN5 MTND5P32-201ENST00000560711 1802 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.52-201ENST00000362760 96 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1082P-201ENST00000364574 107 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.272-201ENST00000364696 102 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 SNORA20-201ENST00000384662 132 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 RNA5SP95-201ENST00000410319 137 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 HMGN1P33-201ENST00000432945 451 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 U7.7-201ENST00000459276 60 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 ACA64.5-201ENST00000516207 127 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 AC090425.1-201ENST00000610007 140 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 AL136317.1-201ENST00000612653 226 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 FTX_2.1-201ENST00000618816 94 ntBASIC0.75□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.164-201ENST00000363709 102 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-53P-201ENST00000365367 106 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-205P-201ENST00000390858 107 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-994P-201ENST00000410507 111 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1190P-201ENST00000410811 104 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 MTATP6P21-201ENST00000440681 189 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU7-62P-201ENST00000458856 62 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 PDCD5P2-201ENST00000507570 312 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.676-201ENST00000516393 96 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1110P-201ENST00000516462 101 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 AC098479.1-201ENST00000609225 154 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 AC021613.1-201ENST00000623880 111 ntBASIC0.74□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.4-201ENST00000362333 112 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-1336P-201ENST00000383886 109 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.580-201ENST00000391004 95 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 MIR1827-201ENST00000408549 66 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 snoU13.2-201ENST00000459201 104 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 RNA5SP236-201ENST00000516169 116 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 RNA5SP255-201ENST00000516370 107 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 MIR4698-201ENST00000577795 80 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 AC025627.3-201ENST00000582078 182 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-94P-201ENST00000607728 107 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 AC011603.4-201ENST00000611325 277 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.270-201ENST00000364693 104 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-392P-201ENST00000364926 101 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 RNY1P6-201ENST00000384193 109 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 Y_RNA.497-201ENST00000384447 98 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 MIR563-201ENST00000385080 79 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 SNORD37.2-201ENST00000391075 66 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-588P-201ENST00000410281 105 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 RNU6-394P-201ENST00000410735 107 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 MIR18B-201ENST00000454574 71 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
CCDC28BQ9BUN5 MIR6841-201ENST00000637129 72 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms