Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 snoU13.2-201ENST00000459201 104 ntBASIC0.68□□□□□ -2.3
NDNQ99608 Y_RNA.680-201ENST00000516441 93 ntBASIC0.68□□□□□ -2.3
NDNQ99608 RNU6-111P-201ENST00000517179 105 ntBASIC0.68□□□□□ -2.3
NDNQ99608 MIR3152-201ENST00000579801 74 ntBASIC0.68□□□□□ -2.3
NDNQ99608 AL162730.1-201ENST00000605734 292 ntBASIC0.68□□□□□ -2.3
NDNQ99608 MIR6717-201ENST00000622747 73 ntBASIC0.68□□□□□ -2.3
NDNQ99608 MIR376A2-201ENST00000636782 80 ntBASIC0.68□□□□□ -2.3
NDNQ99608 RNU6-369P-201ENST00000362515 102 ntBASIC0.67□□□□□ -2.3
NDNQ99608 Y_RNA.164-201ENST00000363709 102 ntBASIC0.67□□□□□ -2.3
NDNQ99608 Y_RNA.307-201ENST00000365022 117 ntBASIC0.67□□□□□ -2.3
NDNQ99608 RNU6-643P-201ENST00000384018 107 ntBASIC0.67□□□□□ -2.3
NDNQ99608 MIR520E-201ENST00000384867 87 ntBASIC0.67□□□□□ -2.3
NDNQ99608 MIR605-201ENST00000385078 83 ntBASIC0.67□□□□□ -2.3
NDNQ99608 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
NDNQ99608 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.67□□□□□ -2.3
NDNQ99608 RNU6-977P-201ENST00000516411 103 ntBASIC0.67□□□□□ -2.3
NDNQ99608 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
NDNQ99608 MIR4452-201ENST00000583004 71 ntBASIC0.67□□□□□ -2.3
NDNQ99608 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
NDNQ99608 AC023934.1-201ENST00000574529 2389 ntBASIC0.67□□□□□ -2.3
NDNQ99608 Y_RNA.75-201ENST00000362927 97 ntBASIC0.66□□□□□ -2.3
NDNQ99608 Y_RNA.144-201ENST00000363521 113 ntBASIC0.66□□□□□ -2.3
NDNQ99608 Y_RNA.430-201ENST00000384081 110 ntBASIC0.66□□□□□ -2.3
NDNQ99608 Y_RNA.435-201ENST00000384095 112 ntBASIC0.66□□□□□ -2.3
NDNQ99608 MIR588-201ENST00000384900 83 ntBASIC0.66□□□□□ -2.3
NDNQ99608 MIR624-201ENST00000385217 97 ntBASIC0.66□□□□□ -2.3
NDNQ99608 RNU6-1319P-201ENST00000390855 104 ntBASIC0.66□□□□□ -2.3
NDNQ99608 RNU6-747P-201ENST00000390928 104 ntBASIC0.66□□□□□ -2.3
NDNQ99608 RNU6-241P-201ENST00000391148 104 ntBASIC0.66□□□□□ -2.3
NDNQ99608 SNORA26.6-201ENST00000391256 115 ntBASIC0.66□□□□□ -2.3
NDNQ99608 RNA5SP127-201ENST00000411051 133 ntBASIC0.66□□□□□ -2.3
NDNQ99608 RNU6-177P-201ENST00000411257 104 ntBASIC0.66□□□□□ -2.3
NDNQ99608 SNORD83.1-201ENST00000411362 77 ntBASIC0.66□□□□□ -2.3
NDNQ99608 snoU13.21-201ENST00000459368 105 ntBASIC0.66□□□□□ -2.3
NDNQ99608 Y_RNA.676-201ENST00000516393 96 ntBASIC0.66□□□□□ -2.3
NDNQ99608 RNU7-70P-201ENST00000516941 66 ntBASIC0.66□□□□□ -2.3
NDNQ99608 MIR6740-201ENST00000618268 113 ntBASIC0.66□□□□□ -2.3
NDNQ99608 AC091932.4-201ENST00000623386 200 ntBASIC0.66□□□□□ -2.3
NDNQ99608 Y_RNA.200-201ENST00000364018 102 ntBASIC0.65□□□□□ -2.31
NDNQ99608 SNORA25.7-201ENST00000364375 127 ntBASIC0.65□□□□□ -2.31
NDNQ99608 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
NDNQ99608 RNU1-119P-201ENST00000391122 165 ntBASIC0.65□□□□□ -2.31
NDNQ99608 RNU6-1190P-201ENST00000410811 104 ntBASIC0.65□□□□□ -2.31
NDNQ99608 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.65□□□□□ -2.31
NDNQ99608 MIR4771-2-201ENST00000577758 74 ntBASIC0.65□□□□□ -2.31
NDNQ99608 MIR4771-1-201ENST00000582617 74 ntBASIC0.65□□□□□ -2.31
NDNQ99608 Z83818.1-201ENST00000603584 150 ntBASIC0.65□□□□□ -2.31
NDNQ99608 RMST_2.1-201ENST00000617263 136 ntBASIC0.65□□□□□ -2.31
NDNQ99608 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.64□□□□□ -2.31
NDNQ99608 Y_RNA.83-201ENST00000363005 113 ntBASIC0.64□□□□□ -2.31
NDNQ99608 Y_RNA.489-201ENST00000384410 101 ntBASIC0.64□□□□□ -2.31
NDNQ99608 MIR563-201ENST00000385080 79 ntBASIC0.64□□□□□ -2.31
NDNQ99608 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
NDNQ99608 RNU6-918P-201ENST00000391219 106 ntBASIC0.64□□□□□ -2.31
NDNQ99608 RNU6-1165P-201ENST00000410119 107 ntBASIC0.64□□□□□ -2.31
NDNQ99608 SEPT7P4-201ENST00000437076 306 ntBASIC0.64□□□□□ -2.31
NDNQ99608 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.64□□□□□ -2.31
NDNQ99608 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.64□□□□□ -2.31
NDNQ99608 MRPS18CP4-201ENST00000535821 231 ntBASIC0.64□□□□□ -2.31
NDNQ99608 AL596211.1-201ENST00000569873 2277 ntBASIC0.64□□□□□ -2.31
NDNQ99608 MIR411-201ENST00000362239 96 ntBASIC0.63□□□□□ -2.31
NDNQ99608 RNU1-133P-201ENST00000364867 167 ntBASIC0.63□□□□□ -2.31
NDNQ99608 RNU6-574P-201ENST00000384265 107 ntBASIC0.63□□□□□ -2.31
NDNQ99608 MIR520F-201ENST00000384824 87 ntBASIC0.63□□□□□ -2.31
NDNQ99608 SNORD12C-201ENST00000386307 89 ntBASIC0.63□□□□□ -2.31
NDNQ99608 MT-TF-201ENST00000387314 71 ntBASIC0.63□□□□□ -2.31
NDNQ99608 AC244098.3-201ENST00000424803 96 ntBASIC0.63□□□□□ -2.31
NDNQ99608 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
NDNQ99608 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
NDNQ99608 AC011195.1-201ENST00000578177 177 ntBASIC0.63□□□□□ -2.31
NDNQ99608 MIR4431-201ENST00000579990 94 ntBASIC0.63□□□□□ -2.31
NDNQ99608 MIR4804-201ENST00000581683 73 ntBASIC0.63□□□□□ -2.31
NDNQ99608 MIR4676-201ENST00000583078 72 ntBASIC0.63□□□□□ -2.31
NDNQ99608 MIR6788-201ENST00000618842 66 ntBASIC0.63□□□□□ -2.31
NDNQ99608 U6.106-201ENST00000636360 105 ntBASIC0.63□□□□□ -2.31
NDNQ99608 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
NDNQ99608 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
NDNQ99608 AC010332.2-201ENST00000613083 1904 ntBASIC0.62□□□□□ -2.31
NDNQ99608 RNU6-597P-201ENST00000365620 102 ntBASIC0.62□□□□□ -2.31
NDNQ99608 Y_RNA.412-201ENST00000384001 104 ntBASIC0.62□□□□□ -2.31
NDNQ99608 SNORA20-201ENST00000384662 132 ntBASIC0.62□□□□□ -2.31
NDNQ99608 SCARNA15-202ENST00000516881 127 ntBASIC0.62□□□□□ -2.31
NDNQ99608 AC009779.6-201ENST00000603972 165 ntBASIC0.62□□□□□ -2.31
NDNQ99608 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
NDNQ99608 AC020891.4-201ENST00000605745 93 ntBASIC0.62□□□□□ -2.31
NDNQ99608 RNU6-312P-201ENST00000364629 107 ntBASIC0.61□□□□□ -2.31
NDNQ99608 MIR938-201ENST00000401216 83 ntBASIC0.61□□□□□ -2.31
NDNQ99608 RNU7-56P-201ENST00000458744 62 ntBASIC0.61□□□□□ -2.31
NDNQ99608 RNU6-893P-201ENST00000458841 100 ntBASIC0.61□□□□□ -2.31
NDNQ99608 RNU7-45P-201ENST00000459460 63 ntBASIC0.61□□□□□ -2.31
NDNQ99608 RPS29P1-201ENST00000465274 159 ntBASIC0.61□□□□□ -2.31
NDNQ99608 uc_338.6-201ENST00000613544 171 ntBASIC0.61□□□□□ -2.31
NDNQ99608 RNU6-1020P-201ENST00000363684 107 ntBASIC0.6□□□□□ -2.31
NDNQ99608 Y_RNA.515-201ENST00000384535 112 ntBASIC0.6□□□□□ -2.31
NDNQ99608 Y_RNA.521-201ENST00000384560 114 ntBASIC0.6□□□□□ -2.31
NDNQ99608 MIR573-201ENST00000384964 99 ntBASIC0.6□□□□□ -2.31
NDNQ99608 MIR520H-201ENST00000385126 88 ntBASIC0.6□□□□□ -2.31
NDNQ99608 MIR125B2-201ENST00000385128 89 ntBASIC0.6□□□□□ -2.31
NDNQ99608 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.6□□□□□ -2.31
NDNQ99608 AC133485.1-201ENST00000567176 124 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms