Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RNU6-453P-201ENST00000516819 85 ntBASIC0.24□□□□□ -2.37
ZNF560Q96MR9 SCARNA24.2-201ENST00000516968 130 ntBASIC0.24□□□□□ -2.37
ZNF560Q96MR9 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
ZNF560Q96MR9 MIR3171-201ENST00000584270 74 ntBASIC0.24□□□□□ -2.37
ZNF560Q96MR9 MIR103A1-201ENST00000362165 78 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 MIR302B-201ENST00000362188 73 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 SNORD118-201ENST00000363593 134 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 RNU5E-4P-201ENST00000364931 120 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 SNORA1-201ENST00000384107 130 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 Y_RNA.466-201ENST00000384294 113 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 RNU6-1203P-201ENST00000410703 110 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 RNU6-1153P-201ENST00000516760 105 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 RNU6-570P-201ENST00000517051 105 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 MIR3678-201ENST00000578455 94 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 AP001282.2-201ENST00000616149 309 ntBASIC0.23□□□□□ -2.37
ZNF560Q96MR9 Y_RNA.61-201ENST00000362835 102 ntBASIC0.22□□□□□ -2.37
ZNF560Q96MR9 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
ZNF560Q96MR9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.22□□□□□ -2.37
ZNF560Q96MR9 RNU6-863P-201ENST00000515989 104 ntBASIC0.22□□□□□ -2.37
ZNF560Q96MR9 RNU6-561P-201ENST00000516222 102 ntBASIC0.22□□□□□ -2.37
ZNF560Q96MR9 AP001094.1-201ENST00000579805 193 ntBASIC0.22□□□□□ -2.37
ZNF560Q96MR9 AL442067.1-201ENST00000613261 223 ntBASIC0.22□□□□□ -2.37
ZNF560Q96MR9 MIR924-201ENST00000638017 53 ntBASIC0.22□□□□□ -2.37
ZNF560Q96MR9 MIR342-201ENST00000362212 99 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.23-201ENST00000362496 106 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 RNU6-740P-201ENST00000364734 105 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 RNU6-867P-201ENST00000364956 107 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.351-201ENST00000365436 96 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 MIR616-201ENST00000385293 97 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.617-201ENST00000410920 90 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.622-201ENST00000411091 108 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 RNU7-80P-201ENST00000459562 61 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 MIR1273G-201ENST00000577677 100 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 SNORA25.18-201ENST00000607153 114 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 AC078938.1-201ENST00000620993 318 ntBASIC0.21□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.44-201ENST00000362676 108 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 RNU6-653P-201ENST00000363074 106 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.237-201ENST00000364439 102 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.304-201ENST00000365011 112 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.430-201ENST00000384081 110 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 SNORA8.2-201ENST00000384372 139 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 SNORD93-201ENST00000408813 74 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 AC096949.1-201ENST00000412047 152 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 MTCYBP6-201ENST00000441810 138 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 SNORD2.1-201ENST00000458762 69 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 MTATP8P1-201ENST00000467115 207 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.2□□□□□ -2.38
ZNF560Q96MR9 MIR6779-201ENST00000617283 64 ntBASIC0.2□□□□□ -2.38
ZNF560Q96MR9 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.454-201ENST00000384224 113 ntBASIC0.19□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.542-201ENST00000384641 111 ntBASIC0.19□□□□□ -2.38
ZNF560Q96MR9 MT-TW-201ENST00000387382 68 ntBASIC0.19□□□□□ -2.38
ZNF560Q96MR9 AL606845.1-201ENST00000404881 255 ntBASIC0.19□□□□□ -2.38
ZNF560Q96MR9 AP003327.1-201ENST00000529684 127 ntBASIC0.19□□□□□ -2.38
ZNF560Q96MR9 AL442663.2-201ENST00000554385 511 ntBASIC0.19□□□□□ -2.38
ZNF560Q96MR9 MIR4643-201ENST00000577473 78 ntBASIC0.19□□□□□ -2.38
ZNF560Q96MR9 MIR3152-201ENST00000579801 74 ntBASIC0.19□□□□□ -2.38
ZNF560Q96MR9 MIR8066-201ENST00000617280 78 ntBASIC0.19□□□□□ -2.38
ZNF560Q96MR9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.19□□□□□ -2.38
ZNF560Q96MR9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
ZNF560Q96MR9 MIR330-201ENST00000362196 94 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.82-201ENST00000363000 102 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.92-201ENST00000363043 102 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 SNORA36.1-201ENST00000363424 132 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 RNA5SP62-201ENST00000363457 110 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.235-201ENST00000364412 102 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.306-201ENST00000365015 102 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.312-201ENST00000365089 102 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.322-201ENST00000365151 102 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.483-201ENST00000384380 101 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 RNU4-83P-201ENST00000410863 133 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.618-201ENST00000410949 107 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.650-201ENST00000459002 102 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.777-201ENST00000516982 102 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 AC133485.4-201ENST00000561835 220 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 MIR4514-201ENST00000581410 57 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.771-201ENST00000598668 102 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 AL356055.1-201ENST00000602528 446 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 AL662814.1-201ENST00000617364 121 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.789-201ENST00000622480 102 ntBASIC0.18□□□□□ -2.38
ZNF560Q96MR9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.18□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.199-201ENST00000364014 102 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.202-201ENST00000364083 110 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 SNORA33.2-201ENST00000365413 134 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 Y_RNA.567-201ENST00000384736 106 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 MIR7-2-201ENST00000384970 110 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 RNU6-381P-201ENST00000391259 108 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 RNA5SP237-201ENST00000410414 113 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 SNORA62.5-201ENST00000516634 120 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 MIR4431-201ENST00000579990 94 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 MIR3129-201ENST00000581095 76 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 MIR5197-201ENST00000583721 112 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 AC011921.3-201ENST00000605540 361 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 U2.14-201ENST00000615943 113 ntBASIC0.17□□□□□ -2.38
ZNF560Q96MR9 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms