Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.7-201ENST00000362352 102 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 RNU6-369P-201ENST00000362515 102 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.350-201ENST00000365409 98 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 RNU1-119P-201ENST00000391122 165 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 MTND3P2-201ENST00000438452 342 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 COX6CP6-201ENST00000490840 228 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 AC004812.1-201ENST00000540773 146 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 MIR4744-201ENST00000581563 82 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 AL365205.2-201ENST00000594586 68 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 MIR376A2-201ENST00000636782 80 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 AC010487.4-201ENST00000637027 61 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 AC099654.10-201ENST00000640395 161 ntBASIC0.65□□□□□ -2.31
SNRNP40Q96DI7 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.477-201ENST00000384352 108 ntBASIC0.64□□□□□ -2.31
SNRNP40Q96DI7 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
SNRNP40Q96DI7 MIR548I3-201ENST00000408378 149 ntBASIC0.64□□□□□ -2.31
SNRNP40Q96DI7 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
SNRNP40Q96DI7 SNORD83.1-201ENST00000411362 77 ntBASIC0.64□□□□□ -2.31
SNRNP40Q96DI7 HMGN1P33-201ENST00000432945 451 ntBASIC0.64□□□□□ -2.31
SNRNP40Q96DI7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.64□□□□□ -2.31
SNRNP40Q96DI7 MIR5197-201ENST00000583721 112 ntBASIC0.64□□□□□ -2.31
SNRNP40Q96DI7 AC062037.2-201ENST00000610137 73 ntBASIC0.64□□□□□ -2.31
SNRNP40Q96DI7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.121-201ENST00000363309 113 ntBASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 RNA5SP457-201ENST00000363657 124 ntBASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 SNORD27-201ENST00000363981 72 ntBASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 RNU6-1292P-201ENST00000383856 107 ntBASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 SNORA79-201ENST00000408376 140 ntBASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 RNA5SP193-201ENST00000410353 107 ntBASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 AL118496.2-201ENST00000448300 230 ntBASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 RNU6-977P-201ENST00000516411 103 ntBASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 Z83818.1-201ENST00000603584 150 ntBASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 U4.1-201ENST00000620349 87 ntBASIC0.63□□□□□ -2.31
SNRNP40Q96DI7 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.65-201ENST00000362846 100 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 RNU6-934P-201ENST00000365154 107 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 SNORA36.2-201ENST00000384004 127 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 SNORD38B-201ENST00000384690 67 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 RNU6-578P-201ENST00000390980 103 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 RNU6-602P-201ENST00000411155 105 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.626-201ENST00000411288 95 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 RNU2-11P-201ENST00000459191 187 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.680-201ENST00000516441 93 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 MIR4711-201ENST00000578274 70 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 SNORD38B-202ENST00000625943 69 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 MIR924-201ENST00000638017 53 ntBASIC0.62□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.115-201ENST00000363272 98 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 RNU6-978P-201ENST00000364371 103 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 SNORA1.1-201ENST00000364671 133 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.308-201ENST00000365043 101 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.452-201ENST00000384202 108 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 RNU6-1190P-201ENST00000410811 104 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 RNU7-62P-201ENST00000458856 62 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 RNU6-1023P-201ENST00000516137 106 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 RNU4-71P-201ENST00000516258 113 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 MIR4308-201ENST00000580634 81 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 MIR3129-201ENST00000581095 76 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 MIR3128-201ENST00000581957 66 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 MIR4503-201ENST00000582187 83 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 MIR6740-201ENST00000618268 113 ntBASIC0.61□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.60-201ENST00000362831 98 ntBASIC0.6□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.193-201ENST00000363979 102 ntBASIC0.6□□□□□ -2.31
SNRNP40Q96DI7 RNU6-702P-201ENST00000364982 107 ntBASIC0.6□□□□□ -2.31
SNRNP40Q96DI7 SNORA26.6-201ENST00000391256 115 ntBASIC0.6□□□□□ -2.31
SNRNP40Q96DI7 RNU6-493P-201ENST00000391321 108 ntBASIC0.6□□□□□ -2.31
SNRNP40Q96DI7 AL121914.1-201ENST00000450188 156 ntBASIC0.6□□□□□ -2.31
SNRNP40Q96DI7 RNU7-45P-201ENST00000459460 63 ntBASIC0.6□□□□□ -2.31
SNRNP40Q96DI7 RNA5SP330-201ENST00000517096 96 ntBASIC0.6□□□□□ -2.31
SNRNP40Q96DI7 RNU2-4P-201ENST00000606190 192 ntBASIC0.6□□□□□ -2.31
SNRNP40Q96DI7 uc_338.6-201ENST00000613544 171 ntBASIC0.6□□□□□ -2.31
SNRNP40Q96DI7 RNU6-923P-201ENST00000364753 107 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.447-201ENST00000384184 113 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 RNU6-196P-201ENST00000384315 107 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.571-201ENST00000384753 98 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 MIR520F-201ENST00000384824 87 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 MIR563-201ENST00000385080 79 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 Y_RNA.618-201ENST00000410949 107 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 AC244098.3-201ENST00000424803 96 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 snoU13.2-201ENST00000459201 104 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 MIR4771-2-201ENST00000577758 74 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 MIR378D2-201ENST00000580636 98 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 MIR4771-1-201ENST00000582617 74 ntBASIC0.59□□□□□ -2.31
SNRNP40Q96DI7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.258-201ENST00000364613 105 ntBASIC0.58□□□□□ -2.32
SNRNP40Q96DI7 Y_RNA.351-201ENST00000365436 96 ntBASIC0.58□□□□□ -2.32
SNRNP40Q96DI7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.58□□□□□ -2.32
SNRNP40Q96DI7 RNU7-80P-201ENST00000459562 61 ntBASIC0.58□□□□□ -2.32
SNRNP40Q96DI7 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
SNRNP40Q96DI7 SNORD116-25-201ENST00000516517 92 ntBASIC0.58□□□□□ -2.32
SNRNP40Q96DI7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.58□□□□□ -2.32
SNRNP40Q96DI7 AL353621.2-201ENST00000605340 133 ntBASIC0.58□□□□□ -2.32
SNRNP40Q96DI7 AC243829.3-201ENST00000622177 108 ntBASIC0.58□□□□□ -2.32
SNRNP40Q96DI7 AC091932.4-201ENST00000623386 200 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 272.7 ms