Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-654P-201ENST00000364373 107 ntBASIC1.39□□□□□ -2.19
CHMP4CQ96CF2 MT-TN-201ENST00000387400 73 ntBASIC1.39□□□□□ -2.19
CHMP4CQ96CF2 PCNPP3-201ENST00000393579 471 ntBASIC1.39□□□□□ -2.19
CHMP4CQ96CF2 RPS29P28-201ENST00000446439 141 ntBASIC1.39□□□□□ -2.19
CHMP4CQ96CF2 RNA5SP404-201ENST00000517118 132 ntBASIC1.39□□□□□ -2.19
CHMP4CQ96CF2 AC023827.1-201ENST00000569247 97 ntBASIC1.39□□□□□ -2.19
CHMP4CQ96CF2 MIR8055-201ENST00000610739 97 ntBASIC1.39□□□□□ -2.19
CHMP4CQ96CF2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CHMP4CQ96CF2 Y_RNA.8-201ENST00000362353 102 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 RNU6-151P-201ENST00000364158 107 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 RNU4-11P-201ENST00000365287 132 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 SNORD18B-201ENST00000365659 72 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 RNU6-125P-201ENST00000384505 107 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 SNORA2B-201ENST00000384583 137 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 RNU6-1190P-201ENST00000410811 104 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 MTATP6P21-201ENST00000440681 189 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 AC112693.2-201ENST00000556538 232 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 MIR3152-201ENST00000579801 74 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 MIR4264-201ENST00000583520 66 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 Y_RNA.778-201ENST00000620203 90 ntBASIC1.38□□□□□ -2.19
CHMP4CQ96CF2 MIR19B1-201ENST00000384829 87 ntBASIC1.37□□□□□ -2.19
CHMP4CQ96CF2 Y_RNA.580-201ENST00000391004 95 ntBASIC1.37□□□□□ -2.19
CHMP4CQ96CF2 Y_RNA.584-201ENST00000391090 114 ntBASIC1.37□□□□□ -2.19
CHMP4CQ96CF2 RNA5SP95-201ENST00000410319 137 ntBASIC1.37□□□□□ -2.19
CHMP4CQ96CF2 RNU6-394P-201ENST00000410735 107 ntBASIC1.37□□□□□ -2.19
CHMP4CQ96CF2 RPS3AP1-201ENST00000413190 320 ntBASIC1.37□□□□□ -2.19
CHMP4CQ96CF2 AC090844.1-201ENST00000422019 156 ntBASIC1.37□□□□□ -2.19
CHMP4CQ96CF2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.37□□□□□ -2.19
CHMP4CQ96CF2 SNORD113.3-201ENST00000364630 78 ntBASIC1.36□□□□□ -2.19
CHMP4CQ96CF2 Y_RNA.354-201ENST00000365448 111 ntBASIC1.36□□□□□ -2.19
CHMP4CQ96CF2 RNU6-804P-201ENST00000384286 107 ntBASIC1.36□□□□□ -2.19
CHMP4CQ96CF2 Y_RNA.497-201ENST00000384447 98 ntBASIC1.36□□□□□ -2.19
CHMP4CQ96CF2 RNU6-907P-201ENST00000390924 102 ntBASIC1.36□□□□□ -2.19
CHMP4CQ96CF2 RNU7-45P-201ENST00000459460 63 ntBASIC1.36□□□□□ -2.19
CHMP4CQ96CF2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.36□□□□□ -2.19
CHMP4CQ96CF2 MIR3144-201ENST00000579460 79 ntBASIC1.36□□□□□ -2.19
CHMP4CQ96CF2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.36□□□□□ -2.19
CHMP4CQ96CF2 MIR6717-201ENST00000622747 73 ntBASIC1.36□□□□□ -2.19
CHMP4CQ96CF2 MIR377-201ENST00000362145 69 ntBASIC1.35□□□□□ -2.19
CHMP4CQ96CF2 RNU1-124P-201ENST00000363861 145 ntBASIC1.35□□□□□ -2.19
CHMP4CQ96CF2 RNU6-1130P-201ENST00000365434 107 ntBASIC1.35□□□□□ -2.19
CHMP4CQ96CF2 RNU6-205P-201ENST00000390858 107 ntBASIC1.35□□□□□ -2.19
CHMP4CQ96CF2 SNORD111-201ENST00000408139 94 ntBASIC1.35□□□□□ -2.19
CHMP4CQ96CF2 MIR1276-201ENST00000408707 83 ntBASIC1.35□□□□□ -2.19
CHMP4CQ96CF2 MIR4295-201ENST00000585286 85 ntBASIC1.35□□□□□ -2.19
CHMP4CQ96CF2 Y_RNA.168-201ENST00000363740 102 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 Y_RNA.180-201ENST00000363867 113 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 SNORD114-22-201ENST00000365423 72 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 RNU6-1319P-201ENST00000390855 104 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 RNU6-747P-201ENST00000390928 104 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 RNU6-241P-201ENST00000391148 104 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 MIR513C-201ENST00000401352 84 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 RNU6-994P-201ENST00000410507 111 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 RNU6-177P-201ENST00000411257 104 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 AC036111.3-201ENST00000526389 112 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 HSPE1P19-201ENST00000603327 295 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 AC106800.4-201ENST00000614905 153 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 AC021613.1-201ENST00000623880 111 ntBASIC1.34□□□□□ -2.19
CHMP4CQ96CF2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.33□□□□□ -2.2
CHMP4CQ96CF2 RNY1P6-201ENST00000384193 109 ntBASIC1.33□□□□□ -2.2
CHMP4CQ96CF2 MIR200A-201ENST00000384875 90 ntBASIC1.33□□□□□ -2.2
CHMP4CQ96CF2 MIR518E-201ENST00000385252 88 ntBASIC1.33□□□□□ -2.2
CHMP4CQ96CF2 RNU6-602P-201ENST00000411155 105 ntBASIC1.33□□□□□ -2.2
CHMP4CQ96CF2 MIR6504-201ENST00000613520 61 ntBASIC1.33□□□□□ -2.2
CHMP4CQ96CF2 RNU4-16P-201ENST00000364737 141 ntBASIC1.32□□□□□ -2.2
CHMP4CQ96CF2 Y_RNA.398-201ENST00000383952 99 ntBASIC1.32□□□□□ -2.2
CHMP4CQ96CF2 SNORA26.6-201ENST00000391256 115 ntBASIC1.32□□□□□ -2.2
CHMP4CQ96CF2 AC067940.1-201ENST00000458411 300 ntBASIC1.32□□□□□ -2.2
CHMP4CQ96CF2 RNU7-62P-201ENST00000458856 62 ntBASIC1.32□□□□□ -2.2
CHMP4CQ96CF2 RNA5SP236-201ENST00000516169 116 ntBASIC1.32□□□□□ -2.2
CHMP4CQ96CF2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.32□□□□□ -2.2
CHMP4CQ96CF2 Y_RNA.116-201ENST00000363292 103 ntBASIC1.31□□□□□ -2.2
CHMP4CQ96CF2 RNU6-209P-201ENST00000384118 107 ntBASIC1.31□□□□□ -2.2
CHMP4CQ96CF2 MIR1285-1-201ENST00000408593 84 ntBASIC1.31□□□□□ -2.2
CHMP4CQ96CF2 RNU6-893P-201ENST00000458841 100 ntBASIC1.31□□□□□ -2.2
CHMP4CQ96CF2 SNORD114-24-201ENST00000365029 72 ntBASIC1.3□□□□□ -2.2
CHMP4CQ96CF2 Y_RNA.430-201ENST00000384081 110 ntBASIC1.3□□□□□ -2.2
CHMP4CQ96CF2 Y_RNA.464-201ENST00000384282 110 ntBASIC1.3□□□□□ -2.2
CHMP4CQ96CF2 MIR942-201ENST00000401111 86 ntBASIC1.3□□□□□ -2.2
CHMP4CQ96CF2 AC244023.1-201ENST00000426884 112 ntBASIC1.3□□□□□ -2.2
CHMP4CQ96CF2 SNORD124-201ENST00000459577 104 ntBASIC1.3□□□□□ -2.2
CHMP4CQ96CF2 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
CHMP4CQ96CF2 AC242498.1-201ENST00000604134 111 ntBASIC1.3□□□□□ -2.2
CHMP4CQ96CF2 RNU6-94P-201ENST00000607728 107 ntBASIC1.3□□□□□ -2.2
CHMP4CQ96CF2 SNORA22.1-201ENST00000362701 134 ntBASIC1.29□□□□□ -2.2
CHMP4CQ96CF2 Y_RNA.120-201ENST00000363304 110 ntBASIC1.29□□□□□ -2.2
CHMP4CQ96CF2 RNU6-690P-201ENST00000365242 106 ntBASIC1.29□□□□□ -2.2
CHMP4CQ96CF2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.29□□□□□ -2.2
CHMP4CQ96CF2 FABP5P4-201ENST00000437203 171 ntBASIC1.29□□□□□ -2.2
CHMP4CQ96CF2 AC087343.1-201ENST00000477341 475 ntBASIC1.29□□□□□ -2.2
CHMP4CQ96CF2 AC011603.4-201ENST00000611325 277 ntBASIC1.29□□□□□ -2.2
CHMP4CQ96CF2 AC012676.2-201ENST00000619258 186 ntBASIC1.29□□□□□ -2.2
CHMP4CQ96CF2 Y_RNA.400-201ENST00000383963 111 ntBASIC1.28□□□□□ -2.2
CHMP4CQ96CF2 SNORA25.12-201ENST00000516202 82 ntBASIC1.28□□□□□ -2.2
CHMP4CQ96CF2 SNORD114-21-201ENST00000606412 72 ntBASIC1.28□□□□□ -2.2
CHMP4CQ96CF2 AC021753.1-201ENST00000635724 168 ntBASIC1.28□□□□□ -2.2
CHMP4CQ96CF2 Y_RNA.251-201ENST00000364551 99 ntBASIC1.27□□□□□ -2.21
CHMP4CQ96CF2 RNU6-1187P-201ENST00000364771 110 ntBASIC1.27□□□□□ -2.21
CHMP4CQ96CF2 RNU6-580P-201ENST00000365159 107 ntBASIC1.27□□□□□ -2.21
CHMP4CQ96CF2 MIR588-201ENST00000384900 83 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms