Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC027335.2-201ENST00000624030 375 ntBASIC1.24□□□□□ -2.21
VPS52Q8N1B4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
VPS52Q8N1B4 RNY1P11-201ENST00000363759 113 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 Y_RNA.398-201ENST00000383952 99 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 SNORD116-18-201ENST00000383961 92 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 RNU6-209P-201ENST00000384118 107 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 Y_RNA.466-201ENST00000384294 113 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 SNORA80D-201ENST00000384488 135 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
VPS52Q8N1B4 SNORA75.2-201ENST00000391138 150 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 SNORA75.3-201ENST00000391231 150 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 RNU7-197P-201ENST00000458836 62 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 RNU7-21P-201ENST00000459430 62 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 SNORA70.22-201ENST00000517160 124 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 AC112693.2-201ENST00000556538 232 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 SEPT14P17-201ENST00000617978 177 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 Z97988.1-201ENST00000637697 135 ntBASIC1.23□□□□□ -2.21
VPS52Q8N1B4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
VPS52Q8N1B4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS52Q8N1B4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS52Q8N1B4 RNU4-11P-201ENST00000365287 132 ntBASIC1.22□□□□□ -2.21
VPS52Q8N1B4 SNORD37.2-201ENST00000391075 66 ntBASIC1.22□□□□□ -2.21
VPS52Q8N1B4 RNU6-613P-201ENST00000410412 108 ntBASIC1.22□□□□□ -2.21
VPS52Q8N1B4 AL591704.2-201ENST00000421658 181 ntBASIC1.22□□□□□ -2.21
VPS52Q8N1B4 RNU2-60P-201ENST00000517290 128 ntBASIC1.22□□□□□ -2.21
VPS52Q8N1B4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS52Q8N1B4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS52Q8N1B4 AC012676.2-201ENST00000619258 186 ntBASIC1.22□□□□□ -2.21
VPS52Q8N1B4 MIR6516-201ENST00000630554 81 ntBASIC1.22□□□□□ -2.21
VPS52Q8N1B4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS52Q8N1B4 RNU6-151P-201ENST00000364158 107 ntBASIC1.21□□□□□ -2.22
VPS52Q8N1B4 MIR222-201ENST00000384992 110 ntBASIC1.21□□□□□ -2.22
VPS52Q8N1B4 MT-TN-201ENST00000387400 73 ntBASIC1.21□□□□□ -2.22
VPS52Q8N1B4 SNORA26.6-201ENST00000391256 115 ntBASIC1.21□□□□□ -2.22
VPS52Q8N1B4 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
VPS52Q8N1B4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.21□□□□□ -2.22
VPS52Q8N1B4 AC021753.1-201ENST00000635724 168 ntBASIC1.21□□□□□ -2.22
VPS52Q8N1B4 Y_RNA.170-201ENST00000363746 110 ntBASIC1.2□□□□□ -2.22
VPS52Q8N1B4 RNU6-396P-201ENST00000365369 105 ntBASIC1.2□□□□□ -2.22
VPS52Q8N1B4 Y_RNA.400-201ENST00000383963 111 ntBASIC1.2□□□□□ -2.22
VPS52Q8N1B4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS52Q8N1B4 MIR2115-201ENST00000516657 100 ntBASIC1.2□□□□□ -2.22
VPS52Q8N1B4 MTND5P41-201ENST00000517498 206 ntBASIC1.2□□□□□ -2.22
VPS52Q8N1B4 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.2□□□□□ -2.22
VPS52Q8N1B4 AC022709.1-201ENST00000615967 87 ntBASIC1.2□□□□□ -2.22
VPS52Q8N1B4 MIR302B-201ENST00000362188 73 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 MIR342-201ENST00000362212 99 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 Y_RNA.8-201ENST00000362353 102 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 RNU1-133P-201ENST00000364867 167 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 MIR19B1-201ENST00000384829 87 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 RNU6-1319P-201ENST00000390855 104 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 RNU6-747P-201ENST00000390928 104 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 Y_RNA.584-201ENST00000391090 114 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 RNU6-241P-201ENST00000391148 104 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 RNU6-1190P-201ENST00000410811 104 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 RNU6-177P-201ENST00000411257 104 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 AC090844.1-201ENST00000422019 156 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 RPS23P4-201ENST00000487908 423 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 RNU7-200P-201ENST00000516105 62 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 RNU7-40P-201ENST00000516397 64 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 RNU6-255P-201ENST00000516957 105 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.19□□□□□ -2.22
VPS52Q8N1B4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
VPS52Q8N1B4 AL596211.1-201ENST00000569873 2277 ntBASIC1.19□□□□□ -2.22
VPS52Q8N1B4 MIR377-201ENST00000362145 69 ntBASIC1.18□□□□□ -2.22
VPS52Q8N1B4 Y_RNA.120-201ENST00000363304 110 ntBASIC1.18□□□□□ -2.22
VPS52Q8N1B4 SNORA1.1-201ENST00000364671 133 ntBASIC1.18□□□□□ -2.22
VPS52Q8N1B4 Y_RNA.430-201ENST00000384081 110 ntBASIC1.18□□□□□ -2.22
VPS52Q8N1B4 RNU6-125P-201ENST00000384505 107 ntBASIC1.18□□□□□ -2.22
VPS52Q8N1B4 HMGN1P33-201ENST00000432945 451 ntBASIC1.18□□□□□ -2.22
VPS52Q8N1B4 RNU7-90P-201ENST00000459216 62 ntBASIC1.18□□□□□ -2.22
VPS52Q8N1B4 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
VPS52Q8N1B4 RNU7-70P-201ENST00000516941 66 ntBASIC1.18□□□□□ -2.22
VPS52Q8N1B4 MIR6788-201ENST00000618842 66 ntBASIC1.18□□□□□ -2.22
VPS52Q8N1B4 MIR6717-201ENST00000622747 73 ntBASIC1.18□□□□□ -2.22
VPS52Q8N1B4 AL391516.1-201ENST00000554380 2449 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 RNY1P5-201ENST00000383890 115 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 RNA5SP261-201ENST00000410536 106 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 RNU6-602P-201ENST00000411155 105 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 AC063976.4-201ENST00000421971 163 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 AC244023.1-201ENST00000426884 112 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 MTATP6P21-201ENST00000440681 189 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 RNU6-113P-201ENST00000516653 101 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.17□□□□□ -2.22
VPS52Q8N1B4 MIR548X2-201ENST00000579776 100 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 MIR4264-201ENST00000583520 66 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 AC242498.1-201ENST00000604134 111 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 MIR6841-201ENST00000637129 72 ntBASIC1.17□□□□□ -2.22
VPS52Q8N1B4 RNU6-349P-201ENST00000362402 107 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 Y_RNA.215-201ENST00000364204 112 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 RNU6-654P-201ENST00000364373 107 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 RNU6-580P-201ENST00000365159 107 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 RNY1P6-201ENST00000384193 109 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 AL603914.1-201ENST00000401964 204 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 MIR548J-201ENST00000408833 112 ntBASIC1.16□□□□□ -2.22
VPS52Q8N1B4 RNU7-45P-201ENST00000459460 63 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms