Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL022718.1-201ENST00000412004 84 ntBASIC1.39□□□□□ -2.19
PTCHD4Q6ZW05 AC245047.7-201ENST00000440265 293 ntBASIC1.39□□□□□ -2.19
PTCHD4Q6ZW05 AC048334.1-201ENST00000477975 159 ntBASIC1.39□□□□□ -2.19
PTCHD4Q6ZW05 RNU7-123P-201ENST00000515911 60 ntBASIC1.39□□□□□ -2.19
PTCHD4Q6ZW05 RNU6-313P-201ENST00000516317 112 ntBASIC1.39□□□□□ -2.19
PTCHD4Q6ZW05 AP003716.2-201ENST00000528260 108 ntBASIC1.39□□□□□ -2.19
PTCHD4Q6ZW05 PRELID3BP2-201ENST00000605362 201 ntBASIC1.39□□□□□ -2.19
PTCHD4Q6ZW05 MIR6841-201ENST00000637129 72 ntBASIC1.39□□□□□ -2.19
PTCHD4Q6ZW05 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 MIR103A2-201ENST00000362154 78 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 RNA5SP264-201ENST00000363115 107 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 Y_RNA.430-201ENST00000384081 110 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 MIR548I2-201ENST00000408348 149 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 MIR1185-1-201ENST00000408598 86 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 RNU6-602P-201ENST00000411155 105 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 SNORA25.15-201ENST00000516487 89 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 RNU6-1258P-201ENST00000516911 111 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 Y_RNA.712-201ENST00000517011 92 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 BX248123.2-201ENST00000606318 124 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 AC025166.1-201ENST00000612411 163 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.38□□□□□ -2.19
PTCHD4Q6ZW05 Y_RNA.171-201ENST00000363760 102 ntBASIC1.37□□□□□ -2.19
PTCHD4Q6ZW05 MIRLET7F2-201ENST00000385277 83 ntBASIC1.37□□□□□ -2.19
PTCHD4Q6ZW05 MIR1323-201ENST00000408090 73 ntBASIC1.37□□□□□ -2.19
PTCHD4Q6ZW05 RNU6-1054P-201ENST00000411293 104 ntBASIC1.37□□□□□ -2.19
PTCHD4Q6ZW05 AL512326.2-201ENST00000426359 151 ntBASIC1.37□□□□□ -2.19
PTCHD4Q6ZW05 RNU6-893P-201ENST00000458841 100 ntBASIC1.37□□□□□ -2.19
PTCHD4Q6ZW05 SNORA31.2-201ENST00000516019 134 ntBASIC1.37□□□□□ -2.19
PTCHD4Q6ZW05 MIR3914-2-201ENST00000637339 95 ntBASIC1.37□□□□□ -2.19
PTCHD4Q6ZW05 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PTCHD4Q6ZW05 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
PTCHD4Q6ZW05 RNU6-1081P-201ENST00000384537 107 ntBASIC1.36□□□□□ -2.19
PTCHD4Q6ZW05 Y_RNA.528-201ENST00000384575 108 ntBASIC1.36□□□□□ -2.19
PTCHD4Q6ZW05 SNORD38B-201ENST00000384690 67 ntBASIC1.36□□□□□ -2.19
PTCHD4Q6ZW05 RNA5SP136-201ENST00000410906 107 ntBASIC1.36□□□□□ -2.19
PTCHD4Q6ZW05 AC004812.1-201ENST00000540773 146 ntBASIC1.36□□□□□ -2.19
PTCHD4Q6ZW05 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.36□□□□□ -2.19
PTCHD4Q6ZW05 MIR8065-201ENST00000620577 100 ntBASIC1.36□□□□□ -2.19
PTCHD4Q6ZW05 SNORD38B-202ENST00000625943 69 ntBASIC1.36□□□□□ -2.19
PTCHD4Q6ZW05 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PTCHD4Q6ZW05 RNA5SP205-201ENST00000364653 136 ntBASIC1.35□□□□□ -2.19
PTCHD4Q6ZW05 RNU6-396P-201ENST00000365369 105 ntBASIC1.35□□□□□ -2.19
PTCHD4Q6ZW05 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
PTCHD4Q6ZW05 SNORA26.9-201ENST00000391322 122 ntBASIC1.35□□□□□ -2.19
PTCHD4Q6ZW05 MIR1289-2-201ENST00000408360 111 ntBASIC1.35□□□□□ -2.19
PTCHD4Q6ZW05 RNU7-113P-201ENST00000459273 62 ntBASIC1.35□□□□□ -2.19
PTCHD4Q6ZW05 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.35□□□□□ -2.19
PTCHD4Q6ZW05 AC022523.2-201ENST00000561045 150 ntBASIC1.35□□□□□ -2.19
PTCHD4Q6ZW05 MTND5P18-201ENST00000445624 1801 ntBASIC1.35□□□□□ -2.19
PTCHD4Q6ZW05 Y_RNA.354-201ENST00000365448 111 ntBASIC1.34□□□□□ -2.19
PTCHD4Q6ZW05 Y_RNA.531-201ENST00000384589 121 ntBASIC1.34□□□□□ -2.19
PTCHD4Q6ZW05 RNU6-1104P-201ENST00000384723 104 ntBASIC1.34□□□□□ -2.19
PTCHD4Q6ZW05 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.34□□□□□ -2.19
PTCHD4Q6ZW05 snoU13.15-201ENST00000459407 104 ntBASIC1.34□□□□□ -2.19
PTCHD4Q6ZW05 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
PTCHD4Q6ZW05 MIR3945-201ENST00000581853 98 ntBASIC1.34□□□□□ -2.19
PTCHD4Q6ZW05 AL359881.1-201ENST00000602916 267 ntBASIC1.34□□□□□ -2.19
PTCHD4Q6ZW05 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
PTCHD4Q6ZW05 MIR6516-201ENST00000630554 81 ntBASIC1.34□□□□□ -2.19
PTCHD4Q6ZW05 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.2
PTCHD4Q6ZW05 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 Y_RNA.291-201ENST00000364886 113 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 Y_RNA.346-201ENST00000365385 112 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 Y_RNA.470-201ENST00000384307 117 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 SNORD12C-201ENST00000386307 89 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 AC244023.1-201ENST00000426884 112 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 COX6CP6-201ENST00000490840 228 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 AC113410.1-201ENST00000505029 247 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 SNORD33.1-201ENST00000516213 88 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 MIR2115-201ENST00000516657 100 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 RNU11-2P-201ENST00000516898 142 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 MIR548AI-201ENST00000579940 88 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 AC242498.1-201ENST00000604134 111 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 U6.95-201ENST00000636931 70 ntBASIC1.33□□□□□ -2.2
PTCHD4Q6ZW05 RNU6-654P-201ENST00000364373 107 ntBASIC1.32□□□□□ -2.2
PTCHD4Q6ZW05 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
PTCHD4Q6ZW05 RNA5SP190-201ENST00000365222 118 ntBASIC1.32□□□□□ -2.2
PTCHD4Q6ZW05 Y_RNA.363-201ENST00000365529 113 ntBASIC1.32□□□□□ -2.2
PTCHD4Q6ZW05 Y_RNA.563-201ENST00000384707 108 ntBASIC1.32□□□□□ -2.2
PTCHD4Q6ZW05 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
PTCHD4Q6ZW05 MT-TI-201ENST00000387365 69 ntBASIC1.32□□□□□ -2.2
PTCHD4Q6ZW05 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
PTCHD4Q6ZW05 RNA5SP33-201ENST00000516687 98 ntBASIC1.32□□□□□ -2.2
PTCHD4Q6ZW05 Y_RNA.198-201ENST00000364013 98 ntBASIC1.31□□□□□ -2.2
PTCHD4Q6ZW05 Y_RNA.353-201ENST00000365440 108 ntBASIC1.31□□□□□ -2.2
PTCHD4Q6ZW05 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
PTCHD4Q6ZW05 RNU6-205P-201ENST00000390858 107 ntBASIC1.31□□□□□ -2.2
PTCHD4Q6ZW05 SNORA75.2-201ENST00000391138 150 ntBASIC1.31□□□□□ -2.2
PTCHD4Q6ZW05 SNORA75.3-201ENST00000391231 150 ntBASIC1.31□□□□□ -2.2
PTCHD4Q6ZW05 RNA5SP95-201ENST00000410319 137 ntBASIC1.31□□□□□ -2.2
PTCHD4Q6ZW05 SNORD13-201ENST00000459299 104 ntBASIC1.31□□□□□ -2.2
PTCHD4Q6ZW05 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.31□□□□□ -2.2
PTCHD4Q6ZW05 AP000753.3-201ENST00000604083 169 ntBASIC1.31□□□□□ -2.2
PTCHD4Q6ZW05 SNORD115-2-201ENST00000362842 82 ntBASIC1.3□□□□□ -2.2
PTCHD4Q6ZW05 Y_RNA.213-201ENST00000364178 111 ntBASIC1.3□□□□□ -2.2
PTCHD4Q6ZW05 SNORD115-20-201ENST00000365099 82 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms