Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
LIMK1P53667 RNU6-381P-201ENST00000391259 108 ntBASIC0.71□□□□□ -2.3
LIMK1P53667 AC244023.1-201ENST00000426884 112 ntBASIC0.71□□□□□ -2.3
LIMK1P53667 AL121914.1-201ENST00000450188 156 ntBASIC0.71□□□□□ -2.3
LIMK1P53667 SNORD127-201ENST00000458892 86 ntBASIC0.71□□□□□ -2.3
LIMK1P53667 snoU13.21-201ENST00000459368 105 ntBASIC0.71□□□□□ -2.3
LIMK1P53667 MIR4643-201ENST00000577473 78 ntBASIC0.71□□□□□ -2.3
LIMK1P53667 MIR4771-2-201ENST00000577758 74 ntBASIC0.71□□□□□ -2.3
LIMK1P53667 MIR4771-1-201ENST00000582617 74 ntBASIC0.71□□□□□ -2.3
LIMK1P53667 AC242498.1-201ENST00000604134 111 ntBASIC0.71□□□□□ -2.3
LIMK1P53667 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
LIMK1P53667 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
LIMK1P53667 Y_RNA.65-201ENST00000362846 100 ntBASIC0.7□□□□□ -2.3
LIMK1P53667 SNORD27-201ENST00000363981 72 ntBASIC0.7□□□□□ -2.3
LIMK1P53667 RNU6-580P-201ENST00000365159 107 ntBASIC0.7□□□□□ -2.3
LIMK1P53667 MIR520F-201ENST00000384824 87 ntBASIC0.7□□□□□ -2.3
LIMK1P53667 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.7□□□□□ -2.3
LIMK1P53667 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
LIMK1P53667 MIR1197-201ENST00000408818 88 ntBASIC0.7□□□□□ -2.3
LIMK1P53667 RNA5SP222-201ENST00000411039 105 ntBASIC0.7□□□□□ -2.3
LIMK1P53667 MIR3129-201ENST00000581095 76 ntBASIC0.7□□□□□ -2.3
LIMK1P53667 MIR8055-201ENST00000610739 97 ntBASIC0.7□□□□□ -2.3
LIMK1P53667 RNU6-653P-201ENST00000363074 106 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 RNU6-103P-201ENST00000363686 107 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 Y_RNA.308-201ENST00000365043 101 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
LIMK1P53667 SNORA1-201ENST00000384107 130 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 Y_RNA.440-201ENST00000384120 114 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 Y_RNA.556-201ENST00000384677 113 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 RNU1-119P-201ENST00000391122 165 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 RNU6-733P-201ENST00000410759 104 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 AC015818.7-201ENST00000428754 109 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 AC087499.7-201ENST00000441958 109 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 COX6CP6-201ENST00000490840 228 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 RNU6-998P-201ENST00000515894 101 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 RNU6-561P-201ENST00000516222 102 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 AC004812.1-201ENST00000540773 146 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 AC243829.3-201ENST00000622177 108 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 Z97988.1-201ENST00000637697 135 ntBASIC0.69□□□□□ -2.3
LIMK1P53667 Y_RNA.23-201ENST00000362496 106 ntBASIC0.68□□□□□ -2.3
LIMK1P53667 Y_RNA.76-201ENST00000362931 109 ntBASIC0.68□□□□□ -2.3
LIMK1P53667 Y_RNA.162-201ENST00000363683 102 ntBASIC0.68□□□□□ -2.3
LIMK1P53667 MIR548I3-201ENST00000408378 149 ntBASIC0.68□□□□□ -2.3
LIMK1P53667 AC092628.1-201ENST00000436250 252 ntBASIC0.68□□□□□ -2.3
LIMK1P53667 HAR1A.1-201ENST00000459583 118 ntBASIC0.68□□□□□ -2.3
LIMK1P53667 RNU7-70P-201ENST00000516941 66 ntBASIC0.68□□□□□ -2.3
LIMK1P53667 MIR4744-201ENST00000581563 82 ntBASIC0.68□□□□□ -2.3
LIMK1P53667 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
LIMK1P53667 SNORA36.2-201ENST00000384004 127 ntBASIC0.67□□□□□ -2.3
LIMK1P53667 Y_RNA.477-201ENST00000384352 108 ntBASIC0.67□□□□□ -2.3
LIMK1P53667 MIR588-201ENST00000384900 83 ntBASIC0.67□□□□□ -2.3
LIMK1P53667 Y_RNA.618-201ENST00000410949 107 ntBASIC0.67□□□□□ -2.3
LIMK1P53667 MTND2P23-201ENST00000422990 651 ntBASIC0.67□□□□□ -2.3
LIMK1P53667 RNU7-80P-201ENST00000459562 61 ntBASIC0.67□□□□□ -2.3
LIMK1P53667 RNY3P16-201ENST00000516338 101 ntBASIC0.67□□□□□ -2.3
LIMK1P53667 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.67□□□□□ -2.3
LIMK1P53667 Y_RNA.518-201ENST00000384552 113 ntBASIC0.66□□□□□ -2.3
LIMK1P53667 Y_RNA.542-201ENST00000384641 111 ntBASIC0.66□□□□□ -2.3
LIMK1P53667 MIR520H-201ENST00000385126 88 ntBASIC0.66□□□□□ -2.3
LIMK1P53667 RNU6-493P-201ENST00000391321 108 ntBASIC0.66□□□□□ -2.3
LIMK1P53667 RNA5SP261-201ENST00000410536 106 ntBASIC0.66□□□□□ -2.3
LIMK1P53667 RNU6-602P-201ENST00000411155 105 ntBASIC0.66□□□□□ -2.3
LIMK1P53667 SEPT7P4-201ENST00000437076 306 ntBASIC0.66□□□□□ -2.3
LIMK1P53667 Y_RNA.797-201ENST00000515977 94 ntBASIC0.66□□□□□ -2.3
LIMK1P53667 AC097639.2-201ENST00000603159 172 ntBASIC0.66□□□□□ -2.3
LIMK1P53667 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
LIMK1P53667 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
LIMK1P53667 AL596211.1-201ENST00000569873 2277 ntBASIC0.66□□□□□ -2.3
LIMK1P53667 AC010332.2-201ENST00000613083 1904 ntBASIC0.66□□□□□ -2.3
LIMK1P53667 Y_RNA.454-201ENST00000384224 113 ntBASIC0.65□□□□□ -2.31
LIMK1P53667 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.65□□□□□ -2.31
LIMK1P53667 AC244098.3-201ENST00000424803 96 ntBASIC0.65□□□□□ -2.31
LIMK1P53667 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.65□□□□□ -2.31
LIMK1P53667 MTCYBP9-201ENST00000431021 303 ntBASIC0.65□□□□□ -2.31
LIMK1P53667 AL118496.2-201ENST00000448300 230 ntBASIC0.65□□□□□ -2.31
LIMK1P53667 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.65□□□□□ -2.31
LIMK1P53667 RNU6-1045P-201ENST00000516321 107 ntBASIC0.65□□□□□ -2.31
LIMK1P53667 RNU2-4P-201ENST00000606190 192 ntBASIC0.65□□□□□ -2.31
LIMK1P53667 RNU6-35P-201ENST00000384530 107 ntBASIC0.64□□□□□ -2.31
LIMK1P53667 RNU6-1190P-201ENST00000410811 104 ntBASIC0.64□□□□□ -2.31
LIMK1P53667 MIR18B-201ENST00000454574 71 ntBASIC0.64□□□□□ -2.31
LIMK1P53667 SNORD116-25-201ENST00000516517 92 ntBASIC0.64□□□□□ -2.31
LIMK1P53667 MIR3152-201ENST00000579801 74 ntBASIC0.64□□□□□ -2.31
LIMK1P53667 MIR4676-201ENST00000583078 72 ntBASIC0.64□□□□□ -2.31
LIMK1P53667 Z83818.1-201ENST00000603584 150 ntBASIC0.64□□□□□ -2.31
LIMK1P53667 MIR6740-201ENST00000618268 113 ntBASIC0.64□□□□□ -2.31
LIMK1P53667 RNU6-923P-201ENST00000364753 107 ntBASIC0.63□□□□□ -2.31
LIMK1P53667 RNU6-364P-201ENST00000384387 107 ntBASIC0.63□□□□□ -2.31
LIMK1P53667 SNORD12C-201ENST00000386307 89 ntBASIC0.63□□□□□ -2.31
LIMK1P53667 RNU6-1165P-201ENST00000410119 107 ntBASIC0.63□□□□□ -2.31
LIMK1P53667 RPL39P25-201ENST00000449384 154 ntBASIC0.63□□□□□ -2.31
LIMK1P53667 RNU7-45P-201ENST00000459460 63 ntBASIC0.63□□□□□ -2.31
LIMK1P53667 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
LIMK1P53667 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
LIMK1P53667 MIR2909-201ENST00000617113 69 ntBASIC0.63□□□□□ -2.31
LIMK1P53667 Y_RNA.280-201ENST00000364765 112 ntBASIC0.62□□□□□ -2.31
LIMK1P53667 RNU6-578P-201ENST00000390980 103 ntBASIC0.62□□□□□ -2.31
LIMK1P53667 MIR938-201ENST00000401216 83 ntBASIC0.62□□□□□ -2.31
LIMK1P53667 snoU13.2-201ENST00000459201 104 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 269.7 ms