Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 Y_RNA.618-201ENST00000410949 107 ntBASIC0.47□□□□□ -2.33
GPC3P51654 SNORD83.1-201ENST00000411362 77 ntBASIC0.47□□□□□ -2.33
GPC3P51654 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
GPC3P51654 MIR3152-201ENST00000579801 74 ntBASIC0.47□□□□□ -2.33
GPC3P51654 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.47□□□□□ -2.33
GPC3P51654 AC243829.6-201ENST00000612652 106 ntBASIC0.47□□□□□ -2.33
GPC3P51654 AL442067.1-201ENST00000613261 223 ntBASIC0.47□□□□□ -2.33
GPC3P51654 AC010487.4-201ENST00000637027 61 ntBASIC0.47□□□□□ -2.33
GPC3P51654 snoU2_19.4-201ENST00000364329 80 ntBASIC0.46□□□□□ -2.34
GPC3P51654 Y_RNA.288-201ENST00000364854 92 ntBASIC0.46□□□□□ -2.34
GPC3P51654 Y_RNA.483-201ENST00000384380 101 ntBASIC0.46□□□□□ -2.34
GPC3P51654 MIR588-201ENST00000384900 83 ntBASIC0.46□□□□□ -2.34
GPC3P51654 MIR520H-201ENST00000385126 88 ntBASIC0.46□□□□□ -2.34
GPC3P51654 MIR938-201ENST00000401216 83 ntBASIC0.46□□□□□ -2.34
GPC3P51654 RNU6-602P-201ENST00000411155 105 ntBASIC0.46□□□□□ -2.34
GPC3P51654 AC090844.1-201ENST00000422019 156 ntBASIC0.46□□□□□ -2.34
GPC3P51654 snoU13.2-201ENST00000459201 104 ntBASIC0.46□□□□□ -2.34
GPC3P51654 MTATP8P1-201ENST00000467115 207 ntBASIC0.46□□□□□ -2.34
GPC3P51654 MIR4804-201ENST00000581683 73 ntBASIC0.46□□□□□ -2.34
GPC3P51654 MIR4676-201ENST00000583078 72 ntBASIC0.46□□□□□ -2.34
GPC3P51654 AC008737.2-201ENST00000599446 118 ntBASIC0.46□□□□□ -2.34
GPC3P51654 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.46□□□□□ -2.34
GPC3P51654 Y_RNA.7-201ENST00000362352 102 ntBASIC0.45□□□□□ -2.34
GPC3P51654 RNU6-369P-201ENST00000362515 102 ntBASIC0.45□□□□□ -2.34
GPC3P51654 Y_RNA.205-201ENST00000364128 113 ntBASIC0.45□□□□□ -2.34
GPC3P51654 Y_RNA.351-201ENST00000365436 96 ntBASIC0.45□□□□□ -2.34
GPC3P51654 MT-TW-201ENST00000387382 68 ntBASIC0.45□□□□□ -2.34
GPC3P51654 MIR1302-3-201ENST00000408128 138 ntBASIC0.45□□□□□ -2.34
GPC3P51654 RNU6-1165P-201ENST00000410119 107 ntBASIC0.45□□□□□ -2.34
GPC3P51654 RNU6-177P-201ENST00000411257 104 ntBASIC0.45□□□□□ -2.34
GPC3P51654 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.45□□□□□ -2.34
GPC3P51654 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
GPC3P51654 RNU6-653P-201ENST00000363074 106 ntBASIC0.44□□□□□ -2.34
GPC3P51654 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-472P-201ENST00000384299 107 ntBASIC0.44□□□□□ -2.34
GPC3P51654 Y_RNA.512-201ENST00000384518 102 ntBASIC0.44□□□□□ -2.34
GPC3P51654 MIR193B-201ENST00000384907 83 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-1319P-201ENST00000390855 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-747P-201ENST00000390928 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-241P-201ENST00000391148 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-447P-201ENST00000410293 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-1118P-201ENST00000410382 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-1076P-201ENST00000410397 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-355P-201ENST00000410427 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-791P-201ENST00000410467 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-705P-201ENST00000410601 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-1100P-201ENST00000410691 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-860P-201ENST00000410860 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-1217P-201ENST00000411276 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-785P-201ENST00000411324 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 SNORD116-25-201ENST00000516517 92 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU6-453P-201ENST00000516819 85 ntBASIC0.44□□□□□ -2.34
GPC3P51654 RNU7-70P-201ENST00000516941 66 ntBASIC0.44□□□□□ -2.34
GPC3P51654 MIR4744-201ENST00000581563 82 ntBASIC0.44□□□□□ -2.34
GPC3P51654 MIR5197-201ENST00000583721 112 ntBASIC0.44□□□□□ -2.34
GPC3P51654 AL365205.2-201ENST00000594586 68 ntBASIC0.44□□□□□ -2.34
GPC3P51654 U6.90-201ENST00000614007 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 U6.70-201ENST00000620287 104 ntBASIC0.44□□□□□ -2.34
GPC3P51654 Y_RNA.54-201ENST00000362766 105 ntBASIC0.43□□□□□ -2.34
GPC3P51654 RNU6-1309P-201ENST00000363305 108 ntBASIC0.43□□□□□ -2.34
GPC3P51654 Y_RNA.416-201ENST00000384014 113 ntBASIC0.43□□□□□ -2.34
GPC3P51654 Y_RNA.430-201ENST00000384081 110 ntBASIC0.43□□□□□ -2.34
GPC3P51654 RNU6-364P-201ENST00000384387 107 ntBASIC0.43□□□□□ -2.34
GPC3P51654 RNU6-738P-201ENST00000384531 106 ntBASIC0.43□□□□□ -2.34
GPC3P51654 SNORA20-201ENST00000384662 132 ntBASIC0.43□□□□□ -2.34
GPC3P51654 MIR563-201ENST00000385080 79 ntBASIC0.43□□□□□ -2.34
GPC3P51654 MIR125B2-201ENST00000385128 89 ntBASIC0.43□□□□□ -2.34
GPC3P51654 MIR140-201ENST00000385282 100 ntBASIC0.43□□□□□ -2.34
GPC3P51654 MIR1257-201ENST00000408490 117 ntBASIC0.43□□□□□ -2.34
GPC3P51654 RNU6-651P-201ENST00000411040 105 ntBASIC0.43□□□□□ -2.34
GPC3P51654 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.43□□□□□ -2.34
GPC3P51654 AL138752.1-201ENST00000452964 351 ntBASIC0.43□□□□□ -2.34
GPC3P51654 RNU7-56P-201ENST00000458744 62 ntBASIC0.43□□□□□ -2.34
GPC3P51654 RNU6-893P-201ENST00000458841 100 ntBASIC0.43□□□□□ -2.34
GPC3P51654 snoU13.21-201ENST00000459368 105 ntBASIC0.43□□□□□ -2.34
GPC3P51654 MIR6740-201ENST00000618268 113 ntBASIC0.43□□□□□ -2.34
GPC3P51654 AC010332.2-201ENST00000613083 1904 ntBASIC0.42□□□□□ -2.34
GPC3P51654 Y_RNA.47-201ENST00000362697 108 ntBASIC0.42□□□□□ -2.34
GPC3P51654 Y_RNA.121-201ENST00000363309 113 ntBASIC0.42□□□□□ -2.34
GPC3P51654 Y_RNA.292-201ENST00000364904 97 ntBASIC0.42□□□□□ -2.34
GPC3P51654 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
GPC3P51654 Y_RNA.459-201ENST00000384251 102 ntBASIC0.42□□□□□ -2.34
GPC3P51654 Y_RNA.515-201ENST00000384535 112 ntBASIC0.42□□□□□ -2.34
GPC3P51654 MIR6717-201ENST00000622747 73 ntBASIC0.42□□□□□ -2.34
GPC3P51654 MIR342-201ENST00000362212 99 ntBASIC0.41□□□□□ -2.34
GPC3P51654 Y_RNA.23-201ENST00000362496 106 ntBASIC0.41□□□□□ -2.34
GPC3P51654 SNORA1-201ENST00000384107 130 ntBASIC0.41□□□□□ -2.34
GPC3P51654 Y_RNA.478-201ENST00000384358 107 ntBASIC0.41□□□□□ -2.34
GPC3P51654 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.41□□□□□ -2.34
GPC3P51654 HMGN1P33-201ENST00000432945 451 ntBASIC0.41□□□□□ -2.34
GPC3P51654 RPL39P25-201ENST00000449384 154 ntBASIC0.41□□□□□ -2.34
GPC3P51654 AL121914.1-201ENST00000450188 156 ntBASIC0.41□□□□□ -2.34
GPC3P51654 RNU7-185P-201ENST00000459215 60 ntBASIC0.41□□□□□ -2.34
GPC3P51654 MTND1P19-201ENST00000511780 315 ntBASIC0.41□□□□□ -2.34
GPC3P51654 MIR3612-201ENST00000579753 87 ntBASIC0.41□□□□□ -2.34
GPC3P51654 MIR3129-201ENST00000581095 76 ntBASIC0.41□□□□□ -2.34
GPC3P51654 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
GPC3P51654 RNU6-694P-201ENST00000364071 147 ntBASIC0.4□□□□□ -2.35
GPC3P51654 Y_RNA.277-201ENST00000364754 102 ntBASIC0.4□□□□□ -2.35
GPC3P51654 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms